Dataset: Seep Sediment Metagenome ANM1 - Genbank BioSample SAMN00215736
Deployment: AT15-53

Seep Sediment Metagenome ANM1
Principal Investigator: 
David L. Valentine (University of California-Santa Barbara, UCSB)
Contact: 
David L. Valentine (University of California-Santa Barbara, UCSB)
BCO-DMO Data Manager: 
Stephen R. Gegg (Woods Hole Oceanographic Institution, WHOI BCO-DMO)
Project: 
Current State: 
Final no updates expected
Version: 
19 January 2016
Deployment Synonyms:
 SEEPS09
Version Date: 
2016-01-19
Data URL:
 https://www.bco-dmo.org/dataset-deployment/633019/data

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Description

Metagenomic sequence reads representing viruses from marine sediments at a methane seep — part of the Gordon and Betty Moore Marine Phage Metagenome Initiative

Location:
Pacific Ocean: Santa Monica Basin, offshore California; Depth 820m; Lat. 33.799N, Long. 118.646W

Related files and references:
Henn, M. R., Sullivan, M. B., Stange-Thomann, N., Osburne, M. S., Berlin, A. M., Kelly, L., … Chisholm, S. W. (2010). Analysis of High-Throughput Sequencing and Annotation Strategies for Phage Genomes. PLoS ONE, 5(2), e9083. doi:10.1371/journal.pone.0009083

Paul, B. G., Bagby, S. C., Czornyj, E., Arambula, D., Handa, S., Sczyrba, A., … Valentine, D. L. (2015). Targeted diversity generation by intraterrestrial archaea and archaeal viruses. Nature Communications, 6(1). doi:10.1038/ncomms7585

More information about this dataset deployment