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Accession: PRJNA217777 ID: 217777

marine metagenome

Metagenomic Analysis of Size-fractionated Picoplankton in a Marine Oxygen Minimum Zone

This study explores the genetic and metabolic diversity of microorganisms (Bacteria and Archaea) in a marine oxygen minimum zone (OMZ) off of northern Chile. More...
AccessionPRJNA217777
Data TypeGenome sequencing and assembly
ScopeEnvironment
Organismmarine metagenome[Taxonomy ID: 408172]
unclassified sequences; metagenomes; ecological metagenomes; marine metagenome
Publications
  • Tsementzi D et al., "SAR11 bacteria linked to ocean anoxia and nitrogen loss.", Nature, 2016 Aug 11;536(7615):179-83
  • Ganesh S et al., "Metagenomic analysis of size-fractionated picoplankton in a marine oxygen minimum zone.", ISME J, 2014 Jan;8(1):187-211
Grants
  • "CAREER: A phylogenetic and functional understanding of microbial sulfur cycling in oxygen minimum zones" (Grant ID 1151698, National Science Foundation)
  • "Center for Microbial Oceanography: Research and Education (C-MORE)" (Grant ID EF0424599, National Science Foundation)
SubmissionRegistration date: 11-Oct-2016
School of Biology, Georgia Institute of Technology
Related Resources
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)4
SRA Experiments36
Publications
PubMed2
PMC2
Other datasets
BioSample36
Assembly4
SRA Data Details
ParameterValue
Data volume, Gbases1
Data volume, Mbytes2765

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  • PRJNA217777 (1)
    BioProject
  • marine metagenome
    marine metagenome
    Metagenomic Analysis of Size-fractionated Picoplankton in a Marine Oxygen Minimum Zone
    BioProject

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