Instruments

Instrument Name Acronymsort ascending Description
Grooved PVC settlement plate

An artificial colonization substrate made of a sheet of PVC with engraved lines to roughen its surface. It is used to determine the extent of colonization and/or the diversity of settled organisms in a marine or artificial environment.


PI-supplied names:
PVC settlement panels;
Artificial settlement panels
Underwater Camera

All types of photographic equipment that may be deployed underwater including stills, video, film and digital systems.


PI-supplied names:
SNOY CCD V801;
Canon Legria video cameras;
Canon Legria underwater video cameras;
more…

Canon Legria underwater video cameras;
Olympus TG-5 ;
;
Sealife Micro HD;
GoPro Hero 4 (4K, 30fps);
Nikon D90 and Nikon D7000;
Sony Mavica digital camera (either MVC-7 or MVC-FD81);
Sony Mavica digital camera (either MVC-7 or MVC-FD81) ;
Canon Rebel T5i;
a camera lander with two downward-facing video cameras;
GoPro Hero 3+ camera;
Sony AX100 video camera;
GoPro Hero 4;
SPC-UW-Zoocam
BINCKE net

The Benthic Ichthyofauna Net for Coral/Kelp Environments (BINCKE) is a rectangular net opened and closed by means of a rigid, hinged frame at one end and of variable size depending upon the size and behavior of targeted species. It is used for the collection of fishes from structurally complex environments (e.g., coral reefs, kelp forests.
See Anderson T.W. and M.H. Carr. 1998. BINCKE: A highly efficient net for collecting reef-associated fishes. Environmental Biology of Fishes 51:111-115.


PI-supplied names:
drifting subsurface profiling float

An unmanned instrumented platform drifting freely in the water column that periodically makes vertical traverses through the water column (e.g. Argo float).


PI-supplied names:
SOS-Argo Float
Sediment Porewater Sampler

A device that collects samples of pore water from various horizons below the seabed.


PI-supplied names:
Rhizon samplers;
Rhizons;
Rhizon samplers (Rhizosphere Research Products, Wageningen, The Netherlands);
more…

PushPoint sippers
Water Level Sensor

For measuring water level in fresh and salt water including tanks, wells, rivers, and the ocean.


PI-supplied names:
ToughSonic;
Wave Staff III
Beardsley Drifter

Beardsley Drifters are near-surface satellite-tracked drifters used for observations of circulation patterns. They are WOCE-style drifters featuring holey sock drogues. Each drifter has a small (~ 30 cm diameter) surface float with ARGOS transmitter and batteries tethered to a holey sock drogue centered at 15 m below the surface. The drogue, about 10 m tall and 1 m in diameter, is designed to "lock" itself to the water so that the surface float follows the mean water motion at 15 m depth with very little slippage even in high winds. Thus measuring the drifter's position as a function of time provides a Lagrangian measurement of the 15-m ocean current.


PI-supplied names:
Drifter Buoy
Gerard barrel

A barrel used to collect water samples in oceanography. It holds 250 liters of sea water.


PI-supplied names:
high-speed camera

A high-speed imaging camera is capable of recording rapid phenomena with high-frame rates. After recording, the images stored on the medium can be played back in slow motion. The functionality in a high-speed imaging device results from the frame rate, or the number of individual stills recorded in the period of one second (fps). Common video cameras will typically record about 24 to 40 fps, yet even low-end high-speed cameras will record 1,000 fps.


PI-supplied names:
high-speed video camera;
Photron FASTCAM Mini AX50;
Edgertronic high-speed camera;
more…

Photron FastCam Mini Ux100;
FASTCAM Mini AX200, Photron
3D scanner

A 3D scan captures digital information about the shape of an object with equipment that uses a laser or light to measure the distance between the scanner and the object.


PI-supplied names:
Next Engine Ultra HD 3D Scanner;
;
3D scanner (HDI 120, LMI Technologies Inc.);
more…

Capture Mini 3D scanner
Nortek Signature 100 Acoustic Doppler Current Profiler

A long-range current profiler designed for combined current profile and biomass measurements. The Signature100 combines a four-beam current profiler operating at 100 kHz with an optional scientific echosounder. Applications include providing insight into the dynamics of zooplankton, krill or schools of fish; current profiling; providing insight into small-scale physical processes; and upwelling and downwelling studies. The instrument is suitable for buoy mounting with internal attitude and heading reference system (AHRS). Optional centre beam with 70-120 kHz Both the current profiler and the biomass measurements have an effective range of 300-400 m. The echosounder has a velocity resolution of 0.1 cm/s, a maximum sampling rate of 1 Hz (1/2 Hz at max output power), and a standard range of 0-1500 m.


PI-supplied names:
Nortek Signature 100 Acoustic Doppler Current Profiler
microarray scanner

Microarray scanners are instruments used to detect and quantify the intensity of fluorescence of spots on a microarray slide, by selectively exciting fluorophores with a laser and measuring the fluorescence.

A microarray scanner typically consists of lasers, a special microscope, and a camera. The DNA material in the microarray is labeled with fluorescents which become excited by the lasers in the scanner. The microscope and camera work together to create a digital image of the array.


PI-supplied names:
Agilent SureScan Microarray Scanner G2600D
vacuum manifold

A device that is used for the vacuum-driven processing of multiwell strips or plates, or spin columns.


PI-supplied names:
Waters Vacuum Manifold (Agilent)
digital thermometer

An instrument that measures temperature digitally.


PI-supplied names:
certified digital thermometer;
NIST traceable thermocouples;
Used to measure temperature;
more…

;
Mercury thermometer;
Thermometer;
ThermoFisher Traceable;
Traceable High Accuracy ±0.2°C Digital Thermometer S/N 170718701;
Traceable digital thermometer (Control Company 5-077);
FisherBrand™ Traceable™; Model 5-077-8;
handheld digital thermometer: Fisherbrand Traceable Platinum Ultra-Accurate Digital Thermometer;
handheld digital thermometer: Fisherbrand Traceable Platinum Ultra-Accurate Digital ;
ExTech 39240
Picarro L1102-i Isotopic Water Liquid Analyzer

A portable analyzer designed for laboratories or field based isotope analysis. It uses Cavity Ring-Down Spectroscopy (CRDS) to measure the spectral signature of the molecule of interest. The instrument includes a closed-loop temperature and pressure control. The L1102-i can be used for analysis of liquid water only. It has a typical precision of 0.1 per mil for d18O and 0.5 per mil for dD.


PI-supplied names:
Picarro L1102-I Liquid Analyzer
PME miniPAR logger

A submersible instrument that logs PAR (Photosynthetically Active Radiation), temperature and tilt measurements. Data are recorded on an internal SD card. The sensor is a LI-192 Underwater Quantum Sensor, manufactured by LI-COR. The sensor uses a silicon photodiode and glass optical filters to create a uniform sensitivity to light wavelengths in the 400-700nm range. It measures PAR from all angles in one hemisphere. An anti-fouling wiper is available. The instrument can be configured to record at intervals between 1 and 60 minutes. It is submersible up to 100 metres. PAR measurement accuracy is dependent upon the stability of the sensor pointed towards the water surface.


PI-supplied names:
PME miniPAR logger;
LI-192, miniPAR
calipers

A caliper (or "pair of calipers") is a device used to measure the distance between two opposite sides of an object. Many types of calipers permit reading out a measurement on a ruled scale, a dial, or a digital display.


PI-supplied names:
Fisher Scientific Traceable Electronic Digital Caliper; manufacturer – Control Company; model # - 14-648-17, FB70250, 32599;
INOX waterproof IP54;
Fowler digital calipers;
more…

calipers;
;
Rexbeti 0–1” Digital Micrometer;
Vernier calipers;
Vernier digital caliper;
digital calipers;
Fowler UltraCal III digital calipers
syringe

A device used to inject fluids into or withdraw them from something; consists of a hollow barrel fitted with a plunger and a hollow needle.


PI-supplied names:
luer slip and luer lock syringes;
quadrat

A square or rectangular rigid frame of known area, often home-made, that is placed on the substrate to be sampled to mark a fixed area for sampling flora or fauna.


PI-supplied names:
quadrat
Van Dorn water sampler

A free-flushing water sample bottle comprising a cylinder (polycarbonate, acrylic or PVC) with a stopper at each end. The bottle is closed by means of a messenger from the surface releasing the tension on a latex band and thus pulling the two stoppers firmly into place. A thermometer can be mounted inside the bottle. One or more bottles can be lowered on a line to allow sampling at a single or multiple depth levels. Van Dorn samplers are suitable for for physical (temperature), chemical and biological sampling in shallow to very deep water. Bottles are typically lowered vertically through the water column although a horizontal version is available for sampling near the seabed or at thermoclines or chemoclines. Because of the lack of metal parts the bottles are suitable for trace metal sampling, although the blue polyurethane seal used in the Alpha version may leach mercury. The Beta version uses white ASA plastic seals that do not leach mercury but are less durable.


PI-supplied names:
Van Dorn bottle;
plastic Van Dorn sampler;
Van Dorn Beta Horizontal Bottle;
more…

Van Dorn Beta™ Horizontal Bottle, Aquatic Biotechnology;
Van Dorn bottles
Particle Size Analyzer

Particle size analysis, particle size measurement, or simply particle sizing is the collective name of the technical procedures, or laboratory techniques which determines the size range, and/or the average, or mean size of the particles in a powder or liquid sample.


PI-supplied names:
Elzone counter;
Multisizer 3 Particle Counter, Beckman Coulter, CA;
Beckman-Coulter laser particle size analyzer;
more…

Beckman Coulter Multisizer 3;
Coulter ;
Malvern Mastersizer 3000
Photometer

An instrument that measures the light intensity emitted from a sample. [Definition Source: NCI]
Photometers are used to measure iIlluminance, irradiance, light absorption, scattering of light, reflection of light, fluorescence, phosphorescence, and luminescence.
[May include luminometers]


PI-supplied names:
Turner Luminometer;
Leitz DMRX-MPVSP microscope photometer
Atmospheric Gas Analyzer

In-situ instruments that can determine the proportion of one or more gaseous components of the atmosphere.


PI-supplied names:
Tekran 2537B mercury analyzer;
Tekran air speciation unit
SeaFAST Automated Preconcentration System

The seaFAST is an automated sample introduction system for analysis of seawater and other high matrix samples for analyses by ICPMS (Inductively Coupled Plasma Mass Spectrometry).


PI-supplied names:
SeaFAST pico;
seaFAST-pico metal extraction system ;
;
more…

SeaFast PICO system (ESI);
SeaFAST system;
seaFAST Pico;
in-line separation-preconcentration system (Elemental Scientific SeaFAST SP3);
SeaFAST Automated Preconcentration System (Elemental Scientific);
Automated solid phase extraction system seaFAST-pico;
Automated solid phase extraction system seaFAST-pico (Elemental Scientific);
SC-DX seaFAST system (Elemental Scientific; M-SFS2-MG-52);
seaFAST preconcentration system (Elemental Scientific)
Fukui fish trap

Fukui produces multi-species, multi-purpose collapsible or stackable fish traps, available in different sizes.


PI-supplied names:
folding Fukui fish traps;
Fukui fish traps
LED light

A light-emitting diode (LED) is a semiconductor light source that emits light when current flows through it. Electrons in the semiconductor recombine with electron holes, releasing energy in the form of photons.


PI-supplied names:
EcoTech Radion XR30w Pro;
Al Hydra HD Full-spectrum aquarium lights;
GalaxyHydro, Roleandro;
more…

near-infrared light-emitting diode: M730L4 730 nm, 515 mW Mounted LED, Thorlabs;
Qubit LED light;
M730L4 730 nm, 515 mW Mounted LED, Thorlabs;
near-infrared light-emitting diode (LED);
Cree XLamp;
array of blue-light emitting diodes (LEDs);
LED lights (Cree Cool White XP-G R5)
Push Corer

Capable of being performed in numerous environments, push coring is just as it sounds. Push coring is simply pushing the core barrel (often an aluminum or polycarbonate tube) into the sediment by hand. A push core is useful in that it causes very little disturbance to the more delicate upper layers of a sub-aqueous sediment.

Description obtained from: http://web.whoi.edu/coastal-group/about/how-we-work/field-methods/coring/


PI-supplied names:
polycarbonate push core;
;
Alvin push cores;
more…

polyvinyl chloride (PVC) corer;
Core;
Corer;
ROV Jason Push Core;
PVC core;
Polycarbonate push core (7 cm ID x 50 cm L) with beveled edges;
push cores;
Polycarbonate push cores large (20 cm I.d.) and small (2.6 cm I.d.);
Alvin pushcore;
push core ;
push corers;
ROV push cores;
pushcores;
Custom made stainless steel push corer
labeling tag

Passive devices attached to captured organisms to specifically identify them when recaptured after release.


PI-supplied names:
Floy Tags
GPS receiver

Acquires satellite signals and tracks your location.

This term has been deprecated. Use instead: https://www.bco-dmo.org/instrument/560


PI-supplied names:
Garmin GPS 76CSX;
Trimble 5800 GPS receiver;
;
more…

Simrad GPS;
Garmin etrex 20;
Garmin eTrex GPS unit;
GPSMAP 76Cx (Garmin);
GPS;
12 channel GPS receiver;
Garmin GPSMAP 76Cx unit;
Garmin C60X GPS;
gnss;
Garmin GPSMAP 60CSx handheld GPS unit;
Garmin 72H handheld unit (Garmin International, Olathe, Kansas, USA);
Hand-held Garmin GPSmap 78;
Garmin GSP 78;
Trimble R6 GPS
ZooSCAN

Description excerpt from Hydroptic website
http://www.hydroptic.com/index.php/public/Page/product_item/ZOOSCAN

The ZooSCAN (CNRS patent) system makes use of scanner technology with custom lighting and a watertight scanning chamber into which liquid zooplankton samples can be placed. The scanner recovers a high-resolution, digitial image and the sample can be recovered without damage.  These digital images can then be investigated by computer processing. While the resolution of the digitized zooplankton images is lower than the image obtained using a binocular microscope this technique has proved to be more than adequate for large sample sets. Identification of species is done by automatic comparison of the image (vignette) of each individual animal in the scanned image with a library data set which may be built by the investigator for each individual survey or imported from a previous survey. The latest machine learning algorithm allows high recognition levels even if we recommend complementary manual sorting to achieve a high number of taxonomic groups.


PI-supplied names:
ZooSCAN ver. 3;
ZooScan
Hydrophone

A hydrophone is a microphone designed to be used underwater for recording or listening to underwater sound. Most hydrophones are based on a piezoelectric transducer that generates electricity when subjected to a pressure change.


PI-supplied names:
;
Ocean Instruments New Zealand;
SoundTrap ST300;
more…

SoundTrap 300 STD Compact recorders
Levels and staffs

Optical instruments and graduated poles used in surveying to determine the elevation of a location relative to a datum level.


PI-supplied names:
Rotary laser level
hydrogen generator

A gas generator that generates hydrogen gas.


PI-supplied names:
VWR hydrogen generator (model H2PEM-165)
Acoustic Recorder

An acoustic recorder senses and records acoustic signals from the environment.


PI-supplied names:
;
SoundTrap recorder and hydrophone (Ocean Instruments New Zealand);
SoundTrap ST300 passive acoustic recorder (Ocean Instruments NZ, Inc.) ;
more…

SoundTrap (ST-300, Ocean Instruments NZ) acoustic recorders;
DMON, Woods Hole Oceanographic Institution
Chromium Controller

The Chromium Controller by 10x Genomics uses advanced microfluidics to perform single-cell partitioning and barcoding. Powered by Next GEM technology, the Chromium Controller enables integrated analysis of single cells at massive scale. Chromium Single Cell products can capture molecular readouts of cell activity in multiple dimensions, including gene expression, cell surface proteins, immune clonotype, antigen specificity, and chromatin accessibility. (https://www.10xgenomics.com/instruments/chromium-controller).


PI-supplied names:
Chromium Controller droplet generator, 10x Genomics (Pleasanton, CA)
circulating water bath

A device designed to regulate the temperature of a vessel by bathing it in water held at the desired temperature. [Definition Source: NCI] 


PI-supplied names:
VWR circulating water bath (model 1130S);
recirculating water bath;
temperature-controlled recirculating water bath incubator;
more…

PCB 1500 Water Peliter System
terrestrial laser scanner

Terrestrial laser scanner


PI-supplied names:
A terrestrial laser scanner;
Trimble(R) GPS
Shipboard Incubator

A device mounted on a ship that holds water samples under conditions of controlled temperature or controlled temperature and illumination.


PI-supplied names:
custom high pressure bioreactor;
Flow-through plexiglass incubator;
;
more…

NORDA/USM incubation system;
Vent-SID;
Fisherbrand Isotemp BOD refrigerated incubators;
incubation bottles, deck incubators
Thermistor

A thermistor is a type of resistor whose resistance varies significantly with temperature, more so than in standard resistors. The word is a portmanteau of thermal and resistor. Thermistors are widely used as inrush current limiters, temperature sensors, self-resetting overcurrent protectors, and self-regulating heating elements.

Thermistors differ from resistance temperature detectors (RTD) in that the material used in a thermistor is generally a ceramic or polymer, while RTDs use pure metals. The temperature response is also different; RTDs are useful over larger temperature ranges, while thermistors typically achieve a higher precision within a limited temperature range, typically 90C to 130C.


PI-supplied names:
Thermistor;
Omega 4404 precision thermistor elements;
thermistor;
more…

SBE 56 thermistor;
Ryan Industries thermistor ;
Omega thermistors;
digital thermistor
DNA Extractor

A device that is used to isolate and collect DNA for subsequent molecular analysis.


PI-supplied names:
AutoGenprep 965;
Nextseq 500 DNA sequencer, Illumina (San Diego, CA)
furnace

An enclosed chamber designed to produce heat.


PI-supplied names:
tube furnace;
combustion furnace;
reduction furnace
Drying Oven

 a heated chamber for drying


PI-supplied names:
;
drying oven;
gravimetric oven;
more…

Fisher Scientific Isotemp Oven;
ThermoScientific Heratherm OMS 180;
Labconco™ FreeZone™ Bulk Tray Dryer;
ThermoScientific Heratherm OMS180;
Thermo Scientific Heratherm General Protocol Oven, Catalog #51028112;
Memmert UFE 400 Sterilizer Laboratory Oven;
Drying Oven (Memmert UFE 400 Sterilizer Laboratory Oven);
Oven
irradiation system

A system of instruments/devices that provide irradiation of materials. Irradiation is an energy transfer process during which a material entity receives energy through radiation.


PI-supplied names:
monochromatic irradiation system
Centrifuge

A machine with a rapidly rotating container that applies centrifugal force to its contents, typically to separate fluids of different densities (e.g., cream from milk) or liquids from solids.


PI-supplied names:
;
centrifuge;
Centrifuge;
more…

Amicon Ultra 100 kDa centrifugal devices (Millipore);
Beckman J6-HC centrifuge;
5 kD membrane centrifuge;
Beckman Coulter Allegra X-12 centrifuge;
Beckman Coulter SW40Ti swinging bucket ultracentrifuge;
Air-driven ultracentrifuge (Beckman);
centrifugation;
MWCO Vivaspin units (Sartorius Stedim, Goettingen, Germany);
Eppendorf 5414 C microcentrifuge;
Fisher Scientific accuSpin 3R;
ELMI CM-7S centrifuge;
IEC clinical centrifuge;
centrifuge tubes
Paroscientific 410K Pressure Transducer

The Paroscientific 410K Pressure Transducer is an absolute pressure transducer with a Digiquartz pressure sensor and precision thermometer. Operates over a temperature range of 0-125 degC and a pressure range of 0-10000 psia with a typical accuracy of 0.01% and a resolution of 0.0001%.


PI-supplied names:
Paroscientific 410K-134 CTD pressure sensor
ROV Global Explorer
PI-supplied names:
;
ROV Global Explorer
Fluorescence Microscope

Instruments that generate enlarged images of samples using the phenomena of fluorescence and phosphorescence instead of, or in addition to, reflection and absorption of visible light. Includes conventional and inverted instruments.


PI-supplied names:
Epifluorescence Microscope;
Microscope-Fluorescence;
Fluorescence Microscope;
more…

Epifluorescence Microscope ;
Leica DMLB microscope;
Epifluorescent microscope;
Nikon microphot-FXA epifluorescent microscope;
;
epifluorescent microscope;
fluorescence microscope;
epiflourescent microscopy;
Epifluorescence Microscope - Zeiss Axiophot;
Zeiss Axioscope epifluorescent microscope;
AX70 epifluorescent microscope;
Epifluorescence microscopy;
Olympus BX61 Upright Wide Field Microscope;
epi-fluorescent microscope under blue-light excitation;
Leica MZFLIII epifluorescence microscope;
epifluorescence microscopy;
epifluorescence microscope;
BX51 epifluorescence microscope;
Olympus BX51 Epiflourescence Microscope;
epi-fluorescent microscope (Leica 80i);
Epifluorescence microscope;
X-ray fluorescence microscope ;
X-ray fluorescence microscope;
AxioScope.A1;
AxioScope.A1, Carl Zeiss, Germany;
epifluorescent microscopy;
Olympus BX51 microscope;
microscope;
Zeiss Axio Imager M2 Epifluorescence microscope;
Zeiss Axio Imager Epifluorescence microscope;
Zeiss Axio Imager 2;
Olympus BX51 epifluorescence microscope;
Ziess AxioZoom microscope;
Olympus BX51 epifluorescent microscope;
AxioScope.A1 (Carl Zeiss, Germany);
Zeiss Axiophot fluorescent microscope;
Epifluorescence microscope: Olympus BX51 microscope with a Olympus DP72 camera and Exfo X-cite Series 120 mercury bulb with a FITC filter for green fluroescence;
EVOS digital fluorescent microscope
Percussion Corer

Capable of being performed in numerous environments, percussion coring techniques are just as they sound. Similar to push coring (in which the core barrel is pushed into the sediment by hand), in percussion coring, the core is driven into the sediment by a percussion instrument such as a mallet or slide hammer.

Description from: https://web.whoi.edu/coastal-group/about/how-we-work/field-methods/coring/


PI-supplied names:
Universal Percussion Corer
Immersion Transducer

An immersion transducer is a single element longitudinal wave transducer with a 1/4 wavelength layer acoustically matched to water. Immersion transducers are specifically designed to transmit ultrasound in applications where the test parts are partially or wholly immersed in water, which allows a uniform and fast coupling technique for rapid scanning of parts.


PI-supplied names:
Olympus immersion transducer
osmotic pump

A pump that uses osmotic pressure to collect water samples.

An example of an osmotic pump is an OsmoSampler (Jannasch et al., 2004) which has no electrical or mechanical parts.

References:

Jannasch Hans W. , Wheat C. Geoff , Plant Josh N. , Kastner Miriam , Stakes Debra S. , (2004),Continuous chemical monitoring with osmotically pumped water samplers: OsmoSampler design and applications, Limnol. Oceanogr. Methods, 2, doi:10.4319/lom.2004.2.102.


PI-supplied names:
OsmoSampler
muffle furnace

A muffle furnace or muffle oven (sometimes retort furnace in historical usage) is a furnace in which the subject material is isolated from the fuel and all of the products of combustion, including gases and flying ash.  A type of jacketed enclosure that is used to heat a material to significantly high temperatures while keeping it contained and fully isolated from external contaminants, chemicals or substances. Muffle furnaces are usually lined with stainless steel, making them largely corrosion-resistant.


PI-supplied names:
Lindberg Blue M1100 muffle furnace;
muffle furnace (Optic Ivymen System Laboratory Furnace 8.2/1100);
;
more…

muffle furnace;
Thermolyne furnace (Thermofischer Scientific, Waltham, MA);
Fisher Scientific Isotemp Muffle Furnace;
Thermo Scientific Lindberg Blue M Muffle Furnace, Catalog #BF51728C-1;
Optic Ivymen System Laboratory Furnace 8.2/1100
ultrasonic cell disrupter (sonicator)

Instrument that applies sound energy to agitate particles in a sample.


PI-supplied names:
sonicator;
Covaris S2 sonicator ;
;
more…

Covaris focused ultrasonicator;
Diagenode Bioruptor ;
Vibracell sonicator probe;
Sonic dismembrator (Model 50, Fisher Scientific);
Sonicator model CL-18, Fisher Scientific;
water bath sonicator (Diagenode UCD-200; Diagenode Inc., Denville, NJ, USA)
PME MiniDOT Logger

The PME miniDOT logger is a submersible sensor designed to measure water temperature and dissolved oxygen concentration. Dissolved oxygen is measured by an optode that measures lifetime-based luminescence quenching of a thin membrane. The sensing foil contains a coating with a variable fluorescence depending on the oxygen concentration of the surrounding water. The miniDOT reports in milligrams per liter (mg/L) and logs all measurements to an internal SD card. Also featured is a temperature sensor and batteries. Data can be offloaded to a computer via USB cable. The logger has an accuracy of +/- 5 percent (+/- 0.3 mg/L) for oxygen, and +/- 0.1 degrees Celsius for temperature. Temperature range is 0 to 35 degrees Celsius, oxygen range is 0 to 150 percent saturation. Depth-rated to 300 meters.

Instrument description from the manufacturer: https://www.pme.com/products/minidot


PI-supplied names:
MiniDOT;
PME Minidot O2 logger;
PME MiniDOT;
more…

PME MiniDots
Power Amplifier

An electronic device designed to take an input signal and output an increased signal strength.


PI-supplied names:
Krohn-Hite model 7500 Amplifier;
Kistler charge amplifier 5995
thermostat

A device designed to regulate temperature by controlling the starting and stopping of a heating/cooling system.


PI-supplied names:
Thermostat;
thermostat system (Apex Aquacontroller, Neptune Systems);
thermostats (Aqualogic®);
more…

Apex Controller, Neptune Systems;
TC-344C Dual channel temperature controller
plate reader

Plate readers (also known as microplate readers) are laboratory instruments designed to detect biological, chemical or physical events of samples in microtiter plates. They are widely used in research, drug discovery, bioassay validation, quality control and manufacturing processes in the pharmaceutical and biotechnological industry and academic organizations. Sample reactions can be assayed in 6-1536 well format microtiter plates. The most common microplate format used in academic research laboratories or clinical diagnostic laboratories is 96-well (8 by 12 matrix) with a typical reaction volume between 100 and 200 uL per well. Higher density microplates (384- or 1536-well microplates) are typically used for screening applications, when throughput (number of samples per day processed) and assay cost per sample become critical parameters, with a typical assay volume between 5 and 50 µL per well. Common detection modes for microplate assays are absorbance, fluorescence intensity, luminescence, time-resolved fluorescence, and fluorescence polarization. From: http://en.wikipedia.org/wiki/Plate_reader, 2014-09-0-23.


PI-supplied names:
plate reader;
;
high-throughput plate reader (BMG);
more…

BioTek Synergy M plate reader;
Synergy H1 Hybrid plate reader;
TECAN spectrafluor plus;
MultiSkan MCC plate reader;
Biotek Synergy fluorescent plate reader;
microplate reader;
Tecan Infinite 200 Pro microplate reader;
multimode plate reader (Molecular Devices);
SpectraMax M5 microplate reader (Molecular Devices, Sunnyvale, CA, USA);
Microplate Reader (Spectramax M Series, Molecular Devices, Sunnyvale, CA);
SpectraMax m2 (Molecular Devices, CA);
Spark 10M Multimode Microplate Reader ;
Molecular Devices FilterMax F5 microplate reader;
TECAN infinite F200;
TECAN infiniteF200;
Respirometry oxygen sensor readers;
BioTek Synergy H1 spectrophotometer plate reader;
BioTek PowerWave XS2;
BioTek ELx808;
Presens Plate Reader SY11000, SDR-547;
Biotek HT Synergy plate reader;
SpectraMax Paradigm Multi‐Mode Microplate Reader (Molecular Devices);
FilterMax F5 multimode plate reader;
Lab BioTek Synergy HT microplate reader (Winooski, VT);
SpectraMax® M2, Molecular Devices;
BioTek Synergy HT Multi-Detection Microplate Reader;
Absorbance Microplate Reader Q4;
BioTek H1 plate reader;
BioTek Synergy HTX Multi-Mode Reader;
Synergy 2 Plate Reader (BioTek Instruments, Winooski, VT, USA);
Synergy H1 plate reader (BioTek, Winooski, VT, USA);
Molecular Devices M3 multimode plate reader (Spectra Max);
SpectraMax M3 plate reader, Molecular Devices, San Jose, CA;
SpectraMax M5 Series microplate reader (Molecular Devices);
microplate reader (EPOCH 2, Agilent);
closed microplate reader system;
Spectramax 190 Microplate Reader;
SpectraMax ID3 plate reader (Molecular Devices);
FlexStation 3 Multi-mode Microplate Reader, BioTek;
Biotek Synergy H1 Hybrid Microplate Reader
Cell Cultivator

An instrument used for the purpose of culturing small cells such as algae or bacteria. May provide temperature and light control and bubbled gas introduction.


PI-supplied names:
Multicultivator MC-1000 OD (Qubit Systems);
Multicultivator MC-1000 OD (Photon Systems Instruments, Drasov, Czech Republic)
bucket thermometer

a thermometer embedded in a small, sturdy, thick plastic container with a rope attached.  Heave the bucket overboard and it catches water and the thermometer inside reads the temperature.


PI-supplied names:
bucket thermometer
Young 41382 relative humidity and temperature probe

The Model 41382 Relative Humidity/Temperature Probe combines high accuracy humidity and temperature sensors in a single probe. The output signal is 0-1V (standard) or 0-5V (user selected option) for both relative humidity and temperature. RH range is 0-100%, temperature range is -50 to +150 deg F. The relative humidity precision is +/- 1% while the temperature precision is +/- 0.5 deg F.


PI-supplied names:
Temperature/Relative Humidity probe (Vaisala, model 41382)
Rotronics Temperature and Humidity Probe

Rotronics device used to measure air temperature


PI-supplied names:
Rotronics;
Rotronic, HC2S3, Hygroclip 2
Generator

A generator is an engine designed to produce electricity or a device designed to produce a vapor or gas.


PI-supplied names:
HP 33120 A function generator
microplate

A flat dish with multiple individual wells that are arrayed in a standardized number, size, and arrangement.


PI-supplied names:
Respirometry microplates;
BMG Spectrostar Nano Microplate Reader;
BMG Polarstar Omega Microplate Reader;
more…

Spectramax 190 Microplate Reader
Squidpop

The squidpop assay is described in detail in Duffy et al., 2015 (doi: 10.1371/journal.pone.0142994).

In summary, the squidpop consists of a standard prey item: a small piece of dried squid mantle tissue, tethered to a fiberglass plant stake with light monofilament fishing line. The squidpop is assembled by first punching a 1.3-centimeter (cm) diameter disc from the squid mantle using a cork borer. A length of monofilament line is threaded through the squid disc and tied to it securely, then the other end of the line is attached to the end of the plant stake with electrical tape, leaving 1-2 cm of line with the squid piece on the end. The short length of the line helps prevent tangling the tethers when squidpops are bundled together.

Squidpops are deployed by pushing the stakes securely into the substratum. The stakes are typically arranged in one or two rows, but the spatial arrangement is of secondary importance to ensuring that the squidpops can be reliably relocated and retrieved at the end of the deployment. Squidpops are assessed for the presence or absence of the squid bait after some period of time.


PI-supplied names:

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