Jed A. Fuhrman

Affiliation:

Address:

Dept. Biological Sciences, Dornsife College of Letters, Arts, and Sciences
3616 Trousdale Parkway
Los Angeles, CA
USA 90089-0371

ORCiD:

0000-0002-2361-1985

Activities reported for Jed A. Fuhrman:

Program coordination

None

Project coordination

Experimentally linking identification and function of marine bacteria (Marine Bacteria)	Principal Investigator
Relating Microbial Biodiversity to Biological Oceanographic Processes (BACT_DISTR)	Lead Principal Investigator, Contact
Pattern and Process in Marine Bacterial, Archaeal, and Protistan Biodiversity, and Effects of Human Impacts (Bacterial, Archaeal, and Protistan Biodiversity)	Principal Investigator, Contact
Marine viral dynamics and incorporation into microbial association networks (Marine Viral Dynamics)	Principal Investigator, Contact
MO: Assembly of Marine Microbial Communities (Mar. Microbial Communities)	Principal Investigator
Environmental regulation of retinal and bacteriochlorophyll biosynthesis (Marine Retinoids)	Co-Principal Investigator
Protistan, prokaryotic, and viral processes at the San Pedro Ocean Time-series (SPOT)	Principal Investigator, Contact

Deployment coordination

Deployment	Synonyms	Platform	Role
lab_Fuhrman_2014	San Pedro Ocean Time-Series, SPOT, Microbial Observatory, MO, Wrigley Time Series Station, WTSS	USC	Principal Investigator
MO_SPOT_Dec_2010	Wrigley_SPOT_Dec_2010	Yellowfin	Co-Chief Scientist
MO_SPOT_Feb_2011	Wrigley_SPOT_Feb_2011	Yellowfin	Co-Chief Scientist
MO_SPOT_Jan_2011	Wrigley_SPOT_Jan_2011	Yellowfin	Co-Chief Scientist
MO_SPOT_Mar_2011	Wrigley_SPOT_Mar_2011	Yellowfin	Co-Chief Scientist
MO_SPOT_Nov_2010	Wrigley_SPOT_Nov_2010	Yellowfin	Co-Chief Scientist
MO_SPOT_Oct_2010	Wrigley_SPOT_Oct_2010	Yellowfin	Co-Chief Scientist
SPOT_20160914		Yellowfin	Co-Principal Investigator
SPOT_20161130		Yellowfin	Co-Principal Investigator
SPOT_20170131		Yellowfin	Co-Principal Investigator
SPOT_20170315		Yellowfin	Co-Principal Investigator
SPOT_20170524		Nerissa	Co-Principal Investigator
SPOT_20170711		Nerissa	Co-Principal Investigator

Datasets

Project: Protistan, prokaryotic, and viral processes at the San Pedro Ocean Time-series

Dataset	Version Date	Current State
A characterization of microbes at the San Pedro Ocean Time-series (SPOT) from 2005 to 2018, using SSU rRNA gene sequencing from two size fractions, with a universal primer set that amplifies from prokaryotes and eukaryotes Principal Investigator	2022-12-29	Final no updates expected
Environmental data, nutrients, and leucine and thymidine bacterial production from samples collected by CTD during cruises in the San Pedro Channel on R/V Yellowfin from 2005 to 2018 Principal Investigator	2022-12-29	Final no updates expected
Nutrient concentrations and cell/virus-like particles counts Principal Investigator, Contact	2022-09-21	Final no updates expected

Project: Environmental regulation of retinal and bacteriochlorophyll biosynthesis

Dataset	Version Date	Current State
Retinoid data from SPOT cruises during different months (2016-2017) Co-Principal Investigator	2017-11-03	Final no updates expected
Retinoid data from Niskin bottle samples from B/O Sarmiento de Gamboa cruise Hotmix2014 in the Mediterranean in 2014 (Marine Retinoids project) Co-Principal Investigator	2015-08-28	Final no updates expected

Project: MO: Assembly of Marine Microbial Communities

Dataset	Version Date	Current State
SPOT Microbial Observatory Protist 18S rDNA TRFLP relative peak abundance data from 2014 (Bacterial, Archaeal, and Protistan Biodiversity project, Marine Viral Dynamics project, Mar. Microbial Communities project) Principal Investigator	2015-01-29	Final no updates expected
SPOT Microbial Observatory Bacterial ARISA relative peak abundance data from 2014 (Bacterial, Archaeal, and Protistan Biodiversity project, Marine Viral Dynamics project, Mar. Microbial Communities project) Principal Investigator	2015-01-29	Final no updates expected
SPOT Microbial Observatory Myovirus g23 5' TRFLP relative peak abundance data from 2014 (Bacterial, Archaeal, and Protistan Biodiversity project, Marine Viral Dynamics project, Mar. Microbial Communities project) Principal Investigator	2015-01-29	Final no updates expected
SPOT Microbial Observatory Myovirus g23 3' TRFLP relative peak abundance data from 2014 (Bacterial, Archaeal, and Protistan Biodiversity project, Marine Viral Dynamics project, Mar. Microbial Communities project) Principal Investigator	2015-01-29	Final no updates expected
Environmental data for SPOT virus sampling in Southern California during 2014 (Bacterial, Archaeal, and Protistan Biodiversity project) Principal Investigator	2015-01-29	Final no updates expected

Project: Marine viral dynamics and incorporation into microbial association networks

Dataset	Version Date	Current State
SPOT Microbial Observatory Protist 18S rDNA TRFLP relative peak abundance data from 2014 (Bacterial, Archaeal, and Protistan Biodiversity project, Marine Viral Dynamics project, Mar. Microbial Communities project) Principal Investigator	2015-01-29	Final no updates expected
SPOT Microbial Observatory Bacterial ARISA relative peak abundance data from 2014 (Bacterial, Archaeal, and Protistan Biodiversity project, Marine Viral Dynamics project, Mar. Microbial Communities project) Principal Investigator	2015-01-29	Final no updates expected
SPOT Microbial Observatory Myovirus g23 5' TRFLP relative peak abundance data from 2014 (Bacterial, Archaeal, and Protistan Biodiversity project, Marine Viral Dynamics project, Mar. Microbial Communities project) Principal Investigator	2015-01-29	Final no updates expected
SPOT Microbial Observatory Myovirus g23 3' TRFLP relative peak abundance data from 2014 (Bacterial, Archaeal, and Protistan Biodiversity project, Marine Viral Dynamics project, Mar. Microbial Communities project) Principal Investigator	2015-01-29	Final no updates expected
Environmental data for SPOT virus sampling in Southern California during 2014 (Bacterial, Archaeal, and Protistan Biodiversity project) Principal Investigator	2015-01-29	Final no updates expected
Environmental measurements from ARISA samples, San Pedro Channel, 5 depths , 2014 (Bacterial, Archaeal, and Protistan Biodiversity project, Marine Viral Dynamics project) Principal Investigator	2014-11-03	Final with updates expected
Listing of monthly cruises to San Pedro Channel sampling station from 2010-2014 (Bacterial, Archaeal, and Protistan Biodiversity project, Marine Viral Dynamics project) Principal Investigator	2014-11-04	Final with updates expected
ARISA relative abundances (bacterial community structure), San Pedro Channel, 5 depths, 2014 (Bacterial, Archaeal, and Protistan Biodiversity project, Marine Viral Dynamics project) Principal Investigator	2014-11-03	Final no updates expected
Putative taxonomic information for ARISA bins as generated from clone libraries, 2014 (Bacterial, Archaeal, and Protistan Biodiversity project, Marine Viral Dynamics project) Principal Investigator	2014-11-03	Final no updates expected

Project: Pattern and Process in Marine Bacterial, Archaeal, and Protistan Biodiversity, and Effects of Human Impacts

Dataset	Version Date	Current State
SPOT Microbial Observatory Protist 18S rDNA TRFLP relative peak abundance data from 2014 (Bacterial, Archaeal, and Protistan Biodiversity project, Marine Viral Dynamics project, Mar. Microbial Communities project) Principal Investigator	2015-01-29	Final no updates expected
SPOT Microbial Observatory Bacterial ARISA relative peak abundance data from 2014 (Bacterial, Archaeal, and Protistan Biodiversity project, Marine Viral Dynamics project, Mar. Microbial Communities project) Principal Investigator	2015-01-29	Final no updates expected
SPOT Microbial Observatory Myovirus g23 5' TRFLP relative peak abundance data from 2014 (Bacterial, Archaeal, and Protistan Biodiversity project, Marine Viral Dynamics project, Mar. Microbial Communities project) Principal Investigator	2015-01-29	Final no updates expected
SPOT Microbial Observatory Myovirus g23 3' TRFLP relative peak abundance data from 2014 (Bacterial, Archaeal, and Protistan Biodiversity project, Marine Viral Dynamics project, Mar. Microbial Communities project) Principal Investigator	2015-01-29	Final no updates expected
Environmental data for SPOT virus sampling in Southern California during 2014 (Bacterial, Archaeal, and Protistan Biodiversity project) Principal Investigator	2015-01-29	Final no updates expected
Environmental measurements from ARISA samples, San Pedro Channel, 5 depths , 2014 (Bacterial, Archaeal, and Protistan Biodiversity project, Marine Viral Dynamics project) Principal Investigator	2014-11-03	Final with updates expected
Listing of monthly cruises to San Pedro Channel sampling station from 2010-2014 (Bacterial, Archaeal, and Protistan Biodiversity project, Marine Viral Dynamics project) Principal Investigator	2014-11-04	Final with updates expected
ARISA relative abundances (bacterial community structure), San Pedro Channel, 5 depths, 2014 (Bacterial, Archaeal, and Protistan Biodiversity project, Marine Viral Dynamics project) Principal Investigator	2014-11-03	Final no updates expected
Putative taxonomic information for ARISA bins as generated from clone libraries, 2014 (Bacterial, Archaeal, and Protistan Biodiversity project, Marine Viral Dynamics project) Principal Investigator	2014-11-03	Final no updates expected

Database

Contribute Data

Jed A. Fuhrman

Activities reported for Jed A. Fuhrman: