Alyson E. Santoro

Affiliation:

University of California-Santa Barbara (UCSB)

Address:

2155 Marine Biotech Lab
Santa Barbara, CA
USA 93106

ORCiD:

0000-0003-2503-8219

Activities reported for Alyson E. Santoro:

Program coordination

None

Project coordination

Gene content, gene expression, and physiology in mesopelagic ammonia-oxidizing archaea (AmoA Archaea)	Principal Investigator, Contact
Collaborative Research: New Approaches to New Production (N-SPOT)	Principal Investigator
The ProteOMZ Expedition: Investigating Life Without Oxygen in the Pacific Ocean (ProteOMZ (Proteomics in an Oxygen Minimum Zone))	Co-Principal Investigator
Collaborative Research: Underexplored Connections between Nitrogen and Trace Metal Cycling in Oxygen Minimum Zones Mediated by Metalloenzyme Inventories (CliOMZ)	Principal Investigator

Deployment coordination

None

Datasets

Project: Collaborative Research: Underexplored Connections between Nitrogen and Trace Metal Cycling in Oxygen Minimum Zones Mediated by Metalloenzyme Inventories

Dataset	Version Date	Current State
Log for the samples taken using the Underway system on board of the R/V Atlantis during the CliOMZ AT50-10 expedition from Golfito, Costa Rica to San Diego, USA that occurred in May - June of 2023. Co-Principal Investigator	2024-03-14	Final no updates expected
Amended Rolling Deck to Repository (R2R) event log application (ELOG) taken on the R/V Atlantis CliOMZ AT50-10 expedition from Golfito Costa Rica to San Diego USA that occurred in May - June of 2023 Co-Principal Investigator	2024-03-14	Data not available
McLane pumps log deployed on the R/V Atlantis CliOMZ AT50-10 expedition from Golfito Costa Rica to San Diego USA that occurred in May - June of 2023. Co-Principal Investigator	2024-03-11	Final no updates expected
Cellular carbon (C) and nitrogen (N) measurements of marine nitrifiers Principal Investigator	2022-03-11	Final no updates expected
Dissolved inorganic carbon (DIC) fixation and dissolved organic carbon (DOC) release measurements of marine nitrifier cultures grown under different culture conditions Principal Investigator	2022-03-09	Final no updates expected
Global proteome analyses of the nitrite-oxidizing bacterium Nitrospira marina grown under atmospheric and low oxygen concentrations Principal Investigator	2021-04-02	Final no updates expected
Targeted proteome analyses of the nitrite-oxidizing bacterium Nitrospira marina grown under atmospheric and low oxygen concentrations Principal Investigator	2021-04-02	Final no updates expected

Project: The ProteOMZ Expedition: Investigating Life Without Oxygen in the Pacific Ocean

Dataset	Version Date	Current State
Nitrous oxide concentrations from the R/V Falkor expedition FK160115 in the Central Pacific from January to February 2016 Principal Investigator	2022-06-08	Final no updates expected
Hydrographic data from the CTD mounted on the trace metal rosette (TMR) aboard R/V Falkor cruise (160115) during the ProteOMZ expedition in the Central Pacific in 2016. Co-Principal Investigator	2018-05-01	Final no updates expected
SeaBird SBE19 underway CTD information for the R/V Falkor 160115 cruise in the Central Pacific for the ProteOMZ expedition in 2016. Co-Principal Investigator	2018-06-15	Final no updates expected
Macronutrient analysis and selected hydrographic data from the R/V Falkor ProteOMZ expedition (FK160115) in the Central Pacific in 2016. Co-Principal Investigator	2018-11-19	Final no updates expected
R/V Falkor 160115 TMR log from the ProteOMZ expedition in the Central Pacific during 2016 (ProteOMZ project) Co-Principal Investigator	2018-11-20	Under revision
R/V Falkor 160115 McLane pump log from the ProteOMZ expedition in the Central Pacific during 2016 (ProteOMZ project) Co-Principal Investigator	2018-12-17	Under revision
R/V Falkor 160115 CTD log from the ProteOMZ expedition in the Central Pacfic during 2016 (ProteOMZ project) Co-Principal Investigator	2017-09-07	Final no updates expected
Event log from R/V Falkor cruise 160115 on the ProteOMZ expedition in the Central Pacific during 2016 (ProteOMZ project) Co-Principal Investigator	2018-12-07	Final no updates expected

Project: Expression of Microbial Nitrification in the Stable Isotopic Systematics of Oceanic Nitrite and Nitrate

Dataset	Version Date	Current State
Nitrate (NO3-) and Nitrite (NO2-) d15N and d18O from R/V Atlantis cruise AT15-61 in Jan-Feb 2010 and R/V Melville cruise MV1104 in Mar-Apr 2011 in the Eastern Tropical South Pacific (ETSP) Scientist	2023-07-10	Final no updates expected
Processed CTD data from cruises R/V Atlantis (AT15-61) in Jan-Feb 2010 and R/V Melville (MV1104) in Mar-Apr 2011 in the Eastern Tropical South Pacific Contact	2020-10-28	Final no updates expected
Ammonia oxidation, nitrite oxidation, and nitrate reduction rates from R/V Atlantis (AT15-61) cruise in Jan-Feb 2010 and R/V Melville (MV1104) cruise in Mar-Apr 2011 in the Eastern Tropical South Pacific Contact	2020-10-14	Final no updates expected
Water column amoA and Nitrospina-like 16S rRNA gene abundances from qPCR in the Eastern Tropical South Pacific using seawater collected on R/V Atlantis (AT15-61) cruise in Jan-Feb 2010 and R/V Melville (MV1104) cruise in Mar-Apr 2011. Contact	2020-10-14	Final no updates expected
Nitrous oxide (N2O) concentrations and associated physicochemical parameters from R/V Atlantis cruise AT15-61 in Jan-Feb 2010 and R/V Melville cruise MV1104 in Mar-Apr 2011 in the Eastern Tropical South Pacific (ETSP) Contact	2023-07-28	Final no updates expected
Dissolved nitrite and ammonium concentration data from R/V Atlantis (AT15-61) cruise in Jan-Feb 2010 and R/V Melville (MV1104) cruise in Mar-Apr 2011 in the Eastern Tropical South Pacific Contact	2020-08-06	Final no updates expected

Project: Gene content, gene expression, and physiology in mesopelagic ammonia-oxidizing archaea

Dataset	Version Date	Current State
Coastal eastern subtropical pacific Co-Principal Investigator	2018-09-06	Preliminary and in progress
Nitrosopelagicus brevis CN25 and U25 grown in nitrogen replete and deplete conditions, with subsequent transcriptome sequencing and identification. Co-Principal Investigator	2018-07-10	Final no updates expected
Ammonium concentrations from CTD bottle samples collected during R/V Hugh R. Sharp cruises HRS1316 and HRS1317 in Chesapeake Bay from August to September of 2013 Principal Investigator	2018-06-15	Final no updates expected
Nitrite concentrations from CTD bottle samples collected during R/V Hugh R. Sharp cruises HRS1316 and HRS1317 in Chesapeake Bay from August to September of 2013 Principal Investigator	2018-06-15	Final no updates expected
Nitrate concentrations from CTD bottle samples collected during R/V Hugh R. Sharp cruises HRS1316 and HRS1317 in the Chesapeake Bay from August to September of 2013 Principal Investigator	2018-06-15	Final no updates expected
Dinitrogen to argon ratios (N2:Ar) from CTD bottle samples collected during R/V Hugh R. Sharp cruise HRS1317 in Chesapeake Bay in September of 2013 Principal Investigator	2018-06-15	Final no updates expected
Ammonia oxidation rates from CTD bottle samples collected during R/V Hugh R. Sharp cruises HRS1316 and HRS1317 in Chesapeake Bay from August to September of 2013 Principal Investigator	2018-06-15	Final no updates expected
Nitrous oxide concentrations from CTD bottle samples collected during R/V Hugh R. Sharp cruises HRS1316 and HRS1317 in Chesapeake Bay from August to September of 2013 Principal Investigator	2018-06-15	Final no updates expected
NCBI Accession number link to the closed genome of Nitrosopelagicus brevis CN25 (AmoA Archaea project) Principal Investigator	2016-10-13	Final with updates expected
Rates of water column nitrification determined from bottle incubations with 15N tracers (15NH4Cl); samples collected on METZYME cruise. Principal Investigator	2016-05-27	Final no updates expected
qPCR data for archaeal amoA ecotypes; samples collected on METZYME cruise. Principal Investigator	2016-05-24	Final no updates expected

Project: Collaborative Research: New Approaches to New Production

Dataset	Version Date	Current State
Primary production from the San Pedro Ocean Time-series (SPOT) measured between 2014 to 2016 Principal Investigator	2020-08-20	Final no updates expected
Ammonia and urea-derived-N oxidation rates measured using 15N additions from San Pedro Ocean Time-series (SPOT) measured between 2014 to 2016 Principal Investigator	2020-08-20	Final no updates expected
N2O concentrations from San Pedro Ocean Time-series (SPOT) measured between 2014 to 2016 Principal Investigator	2020-11-04	Final no updates expected
Measured Nutrients from the San Pedro Ocean Time-series (SPOT) station Co-Principal Investigator	2019-12-20	Final no updates expected
Ammonium concentrations from CTD bottle samples collected during R/V Hugh R. Sharp cruises HRS1316 and HRS1317 in Chesapeake Bay from August to September of 2013 Principal Investigator	2018-06-15	Final no updates expected
Nitrite concentrations from CTD bottle samples collected during R/V Hugh R. Sharp cruises HRS1316 and HRS1317 in Chesapeake Bay from August to September of 2013 Principal Investigator	2018-06-15	Final no updates expected
Nitrate concentrations from CTD bottle samples collected during R/V Hugh R. Sharp cruises HRS1316 and HRS1317 in the Chesapeake Bay from August to September of 2013 Principal Investigator	2018-06-15	Final no updates expected
Dinitrogen to argon ratios (N2:Ar) from CTD bottle samples collected during R/V Hugh R. Sharp cruise HRS1317 in Chesapeake Bay in September of 2013 Principal Investigator	2018-06-15	Final no updates expected
Ammonia oxidation rates from CTD bottle samples collected during R/V Hugh R. Sharp cruises HRS1316 and HRS1317 in Chesapeake Bay from August to September of 2013 Principal Investigator	2018-06-15	Final no updates expected
Nitrous oxide concentrations from CTD bottle samples collected during R/V Hugh R. Sharp cruises HRS1316 and HRS1317 in Chesapeake Bay from August to September of 2013 Principal Investigator	2018-06-15	Final no updates expected

Project: Connecting Trace Elements and Metalloenzymes Across Marine Biogeochemical Gradients (GPc03)

Dataset	Version Date	Current State
Processed hydrography data collected using the ship's CTD package during the Metzyme cruise (R/V Kilo Moana KM1128) in the tropical North Pacific in October 2011 Contact	2017-10-09	Final no updates expected
Rates of water column nitrification determined from bottle incubations with 15N tracers (15NH4Cl); samples collected on METZYME cruise. Principal Investigator	2016-05-27	Final no updates expected
qPCR data for archaeal amoA ecotypes; samples collected on METZYME cruise. Principal Investigator	2016-05-24	Final no updates expected

Database

Contribute Data

Alyson E. Santoro

Activities reported for Alyson E. Santoro: