# Cross-phyla clustering of non-redundant carbonate organic matrix proteins # Drake et al. 2014 - Supplemental Table S1 # PI: Paul Falkowski (Rutgers) # Co-PIs: Y. Rosenthal, R. Sherrell, & O. Schofield (Rutgers) # Version: 27 October 2014 ========================= protein_name coral_species coral_accession coral_reference mollusk_species mollusk_accession mollusk_reference sea_urchin_species sea_urchin_accession sea_urchin_reference cellular_component_GO_term ------------------------- 14-3-3 proteins - nd nd Lottia gigantea lotgi205379; lotgi207549; lotgi222442 Mann 2012 Strongylocentrotus purpuratus XP_003727876.1 Mann 2010 Membrane A Disintigrin/ Metalloproteinase with thrombospondin motfs Acropora millepora JR989905 Moya - nd nd Strongylocentrotus purpuratus XP_780466 Mann 2010 No Usable GO Actin Stylophora pistillata KC342191; KC342193; KC149520 Drake Lottia gigantea lotgi202971 Mann 2012 Strongylocentrotus purpuratus NP_999634 Mann 2008 Cytoskeleton/cytoplasm ADP ribosylation factor ** - nd nd Lottia gigantea lotgi210455; lotgi231498; lotgi236204 Mann 2012 Strongylocentrotus purpuratus XP_780019.2; XP_791037.1 Mann 2008; Mann 2010 Golgi/ER ATP synthase ** - nd nd Crassostrea gigas; Lottia gigantea EKC39329.1; EKC39411.1; lotgi206617; lotgi201878 Zhang 2012; Mann 2012 Strongylocentrotus purpuratus NP_999743.1; NP_001116974.1 Mann 2010 Mitochondria Annexin - nd nd Lottia gigantea lotgi195070; lotgi219490; lotgi219492 Mann 2012 Strongylocentrotus purpuratus XP_003725708.1; XP_783004.3; XP_798157.2 Mann 2008; Mann 2010 Membrane Antigen Ki-67 ** - nd nd Crassostrea gigas EKC25595.1 Zhang 2012 Strongylocentrotus purpuratus XP_999722.1 Mann 2008 Nuclear Region Bone morphogenic protein* - nd nd Pinctada margaritifera 90c_1652_1 Joubert Strongylocentrotus purpuratus NP_999820 Mann 2010 Extracellular Cadherin Acropora millepora; Stylophora pistillata JT011093; KC509947; KC00002; KC509948 Ramos-Silva; Drake Lottia gigantea lotgi106548 Mann 2012 - nd nd Membrane Calcium activated chloride channel - nd nd Lottia gigantea lotgi238844 Mann 2012 Strongylocentrotus purpuratus XP_784730.2 Mann 2008 No Usable GO Calmodulin - nd nd Pinctada margaritifera; Pinctada fucata; Lottia gigantea; Crassostrea gigas 90c_18304_5; 90c_783_6; AY663847; lotgi148903; lotgi219843; EKC42677.1 Joubert; Li; Mann 2012; Zhang 2012 Strongylocentrotus purpuratus XP_003726932 Mann 2008 Membrane Chitotriosidase Acropora millepora JR980703.1 Moya Crassostrea gigas EKC38805.1 Zhang 2012 - nd nd Extracellular/membrane CUB and peptidase containing Acropora millepora JR970990; JT008002 Ramos-Silva Crassostrea gigas EKC18230 Zhang 2012 - nd nd No Usable GO Cyclophilin - nd nd Crassostrea gigas; Lottia gigantea EKC37378.1; EKC37379.1; lotgi223760; lotgi222979; lotgi212757 Zhang 2012; Mann 2012 Strongylocentrotus purpuratus XP_790143.2; NP_001028819.1; SPU008305; SPU007484 Mann 2008b; Mann 2010; Todgham & Hoffman 2009 Other Cystatin - nd nd Lottia gigantea lotgi229619 Mann 2012 Strongylocentrotus purpuratus XP_784732.2 Mann 2010 No Usable GO Dentin matrix protein - nd nd Lottia gigantea lotgi156599 Mann 2012 Strongylocentrotus purpuratus XP_791445.3 Mann 2008 Other Dual oxidase - nd nd Lottia gigantea lotgi99809 Mann 2012 Strongylocentrotus purpuratus NP_001118237 Mann 2008 Extracellular/membrane Dynein - nd nd Lottia gigantea lotgi203845 Mann 2012 Strongylocentrotus purpuratus XP_795406.2; XP_799949.3 Mann 2008 Microtubules EGF/Notch Acropora millepora JT010134; JR979981; JT013839; JR973087; JT002642; JR986374; JR986173 Moya Lottia gigantea lotgi230171 Mann 2012 Strongylocentrotus purpuratus XP_780602; XP_003723785; XP_001179074 Mann 2010 Extracellular Elongation factor ** - nd nd Crassostrea gigas; Lottia gigantea EKC33063.1; lotgi239271; lotgi199050 Zhang 2012; Mann 2012 Strongylocentrotus purpuratus NP_001116969.1; XP_001175642.1 Mann 2008; Mann 2010 Cytoplasm Enolase - nd nd Lottia gigantea lotgi182683 Mann 2012 Strongylocentrotus purpuratus XP_003726238.1 Mann 2008; Mann 2010 Other Ferritin - nd nd Lottia gigantea; Pinctada margaritifera lotgi123691; lotgi178880 Mann 2012; Joubert Strongylocentrotus purpuratus XP_796152.1; XP_003730718.1 Mann 2008 No Usable GO Fibrogenin Acropora millepora JT001283.1; JT013475 Moya Crassostrea gigas EKC37595.1; EKC37598.1 Zhang 2012 - nd nd Extracellular Gelsolin - nd nd Lottia gigantea lotgi105757; lotgi144968; lotgi192582; lotgi214936 Mann 2012 Strongylocentrotus purpuratus XP_792912.2 Mann 2008 Cytoskeleton/cytoplasm Glyceraldehyde 3 phosphate dehydrogenase Stylophora pistillata KC149521 Drake Lottia gigantea lotgi222542 Mann 2012 - nd nd Other Heat shock protein - nd nd Lottia gigantea lotgi161608 Mann 2012 Strongylocentrotus purpuratus XP_781407.2; XP_783030.3; NP_999808.1 Mann 2010 Membrane Heat shock protein 70 - nd nd Crassostrea gigas; Lottia gigantea EKC36325.1; lotgi216416; lotgi177837; lotgi190284; lotgi159745 Zhang 2012; Mann 2012 Strongylocentrotus purpuratus XP_003728714.1; XP_780151.1; XP_003725496.1 Zhang 2012 Membrane Hephaestin/Ceruplasmin Acropora millepora JT019463 Moya Lottia gigantea lotgi83160; lotgi115607 Mann 2012 Strongylocentrotus purpuratus XP_791569 Mann 2010 Extracellular/membrane Histone ** - nd nd Lottia gigantea lotgi175997; lotgi181153 Mann 2012 Strongylocentrotus purpuratus XP_00117550; NP_999707.1; NP_001229615.1; P0899.1 Mann 2008; Mann 2010 Nuclear Region LDL receptor Acropora millepora JT010466 Moya - nd nd Strongylocentrotus purpuratus XP_003727007; XP_787118; XP_782026 Mann 2008b; Mann 2010 Membrane Matrix metalloproteinase Acropora millepora JT016142 Moya Lottia gigantea lotgi231475 Mann 2012 Strongylocentrotus purpuratus XP_003729123; XP_003729017; XP_003729016; XP_786545; XP_003725556; XP_791616; XP_791600; NP_001028820; XP_780356 Mann 2008b; Mann 2010; Stumpp Extracellular MEC2 - nd nd Lottia gigantea lotgi214616 Mann 2012 Strongylocentrotus purpuratus XP_003726858.1 Mann 2008 Membrane Metallo endopeptidase/ Endothelin converting enzyme Acropora millepora JT013571; JT011929 Moya - nd nd Strongylocentrotus purpuratus XP_781407 Mann 2010 Other MSP - nd nd Lottia gigantea lotgi190352 Mann 2012 Strongylocentrotus purpuratus AF519420.1; NP_9998076.1;NP_999807.1; XP_79810; XP_784596.3; NP_001116986.1;XP_785779.2 Illies; Mann 2010; Mann 2008; Todgham & Hofmann; Stumpp Membrane No consensus homologue name 1 Acropora millepora JR989918; JR997520; JT012363 Moya Crassostrea gigas; Lottia gigantea EKC33148.1; lotgi69892 Zhang 2012; Mann 2012 Strongylocentrotus purpuratus XP_785644; XP_786061 Mann 2010 Membrane No consensus homologue name 2 - nd nd Crassostrea gigas; Lottia gigantea EKC30911.1; lotgi116834 Zhang 2012; Mann 2012 Strongylocentrotus purpuratus XP_003724791.1 Mann 2010 Extracellular/membrane Nucleobindin - nd nd Lottia gigantea lotgi121860 Mann 2012 Strongylocentrotus purpuratus XP_003723916.1 Mann 2008 Membrane Osteonectin - nd nd Lottia gigantea lotgi109908 Mann 2012 Strongylocentrotus purpuratus SPU028275 Todgham & Hofmann Extracellular Pancreatic lipase-related Acropora millepora JT011283 Moya Lottia gigantea lotgi98299; lotgi98300; lotgi102397; lotgi109426 Mann 2012 - nd nd Extracellular/membrane Peptidyl-glycine alpha-amidating monooxygenase - nd nd Lottia gigantea lotgi204047 Mann 2012 Strongylocentrotus purpuratus XP_784943.3 Mann 2010 Extracellular/membrane Peptidyl prolyl isomerase - nd nd Lottia gigantea lotgi192237; lotgi238515 Mann 2012 Strongylocentrotus purpuratus XP_785999.1 Mann 2010 Membrane Perlwapin/prismalin/molluscan shell prism nacre protein/shematrin/some collagens Acropora millepora JR981811 Moya Pinctada fucata; Pinctada margaritifera; Haliotis laevigata; Haliotis asinina; Patinopecten yessoensis; Haliotis rufescens BAE93433; BAE93434; BAE93435; BAE93438; BAE93439; BAD27406; AB159512; ACJ06766; 90c_3996_3; 90c_51_2; 90c_600_4; 90c_334_6; 90c_148_5; 90c_441_3; 90c_1350_1; 90c_942_2; 90c_3172_4; 90c_19664_1; 90c_8234_1; 90c_86_6; P84811; DW986256; Q95YF6; BAB70697; AF023459 Yano; Suzuki; Sudo; Zhang 2003; Evans; Kong; Joubert; Treccani; Marie; Sarashina & Endo 2001; Sarashina & Endo 1998; Hasegawa & Uchiyama; Xuan Ri Strongylocentrotus purpuratus SPU009076; SPU015708; SPU003768; SPU022116; NP_999676 Mann 2010; Todgham & Hofmann Other Peroxidasin Acropora millepora JT009428 Moya Lottia gigantea lotgi99791; lotgi99852 Mann 2012 Strongylocentrotus purpuratus XP_797821 Mann 2010 Extracellular Ran ** - nd nd Crassostrea gigas; Crassostrea gigas EKC36560.1; lotgi104069 Zhang 2012; Mann 2012 Strongylocentrotus purpuratus XP_786730.1 Mann 2008; Mann 2010 Nuclear Region Ras-like GTPase/Rab Acropora millepora JT014391 Moya; Ramos-Silva Lottia gigantea lotgi222012; lotgi201174; lotgi226838; lotgi199128; lotgi230301; lotgi205560; lotgi230007; lotgi198201; lotgi187701; lotgi223383; lotgi193895; lotgi225073; lotgi207113 Mann 2012 Strongylocentrotus purpuratus XP_783878; XP_781611; XP_785316.2; NP_001116984; NP_001229596.1 Mann 2008b; Mann 2010 Membrane Ribosomal protein ** - nd nd Lottia gigantea lotgi121932; lotgi237709; lotgi2099786; lotgi223917 Mann 2012 Strongylocentrotus purpuratus XP_794024.2_NP_001229580.1; XP_798304.1 Mann 2008 Nuclear Region SM30/SM32/SM50 - nd nd Lottia gigantea lotgi77105 Mann 2012 Strongylocentrotus purpuratus; Paracentrotus lividus NP_999775.1; NP_999803.1; AF519416.1; NP_999766.1; AAB60620.1; AAA30070.1; XP_79721.1; XP796701.1; CAD56481.1; AM569342.1 Mann 2008; Stumpp; Mann 2010; Martin Extracellular Synthenin - nd nd Lottia gigantea lotgi186095 Mann 2012 Strongylocentrotus purpuratus XP_783994.2 Mann 2010 No Usable GO Thioester-containing protein - nd nd Crassostrea gigas; Lottia gigantea EKC28380.1; lotgi211452; lotgi162872 Zhang 2012; Mann 2012 Strongylocentrotus purpuratus XP_784747.3 Mann 2010 Extracellular Thioredoxin peroxidase - nd nd Lottia gigantea lotgi123611; lotgi150310; lotgi183148 Mann 2012 Strongylocentrotus purpuratus XP_784460.3; XP_786503.2 Mann 2008; Mann 2010 Other Transferrin - nd nd Lottia gigantea lotgi234865 Mann 2012 Strongylocentrotus purpuratus XP_786179.3 Mann 2010 Extracellular Tubulin Stylophora pistillata KC479168 Drake Crassostrea gigas; Lottia gigantea EKC35235.1; lotgi197703; lotgi223558 Zhang 2012; Mann 2012 Strongylocentrotus purpuratus XP_795696; XP_791790; XP_782388 Mann 2010 Microtubules Ubiquitin Stylophora pistillata KC479165 Drake Pinctada fucata; Lottia gigantea AET80727; lotgi126004; lotgi177660 Fang; Mann 2012 Strongylocentrotus purpuratus P23398; XP_789778 Mann 2010 Membrane Uncharacterized 1 Acropora millepora JT020644; JR998853 Moya Lottia gigantea lotgi89037 Mann 2012 - nd nd Extracellular Uncharacterized 2 - nd nd Lottia gigantea lotgi203811 Mann 2012 Strongylocentrotus purpuratus XP_003729021.1; XP_801877.1 Mann 2010 No Usable GO Uncharacterized 3 - nd nd Lottia gigantea lotgi196407 Mann 2012 Strongylocentrotus purpuratus XP_786023.2 Mann 2010 Other Usherin Acropora millepora JR980984 Moya Crassostrea gigas EKC33039.1 Zhang 2012 - nd nd No Usable GO Voltage dependent anion channel ** - nd nd Lottia gigantea lotgi168464 Mann 2012 Strongylocentrotus purpuratus XP_780266.1 Mann 2008 Mitochondria von Willebrand factor D Acropora millepora JT019923.1; JT012539.1; JT006743.1 Moya Crassostrea gigas EKC19252.1 Zhang 2012 - nd nd Extracellular/membrane