# Sequence Accession Numbers # PI: Gregory J. Dick (University of Michigan) # Version History: # Dataset updated: 12 Jan 2015 (current version) # Original version: 30 Dec 2014 ========================= database accession_num description URL ------------------------- NCBI BioProject PRJNA234377 Hydrothermal plume metagenome (viral genomes) http://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA234377 NCBI BioProject PRJNA77837 Guaymas Basin Metagenome http://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA77837 NCBI BioProject PRJNA72707 Metatranscriptomic data from a population of Marine Group I Archaea obtained from the Gulf of California http://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA72707 NCBI Whole Genome Shotgun project AJXC00000000 Marine metagenome; consists of sequences AJXC01000001-AJXC01256912; microbial communities in deep-sea hydrothermal vent plumes in Guaymas Basin & Gulf of California. http://www.ncbi.nlm.nih.gov/nuccore/AJXC00000000 NCBI sequence read archive SRP007999 Metatranscriptomic data from a population of Marine Group I Archaea obtained from the Gulf of California. http://www.ncbi.nlm.nih.gov/Traces/sra/?study=SRP007999 NCBI sequence read archive SRX134769 Guaymas Basin Hydrothermal Vent Background Metatranscriptome - Illumina. 1 ILLUMINA (Illumina HiSeq 2000) run: 122.3M spots; 25.4G bases; 16.5Gb downloads. http://www.ncbi.nlm.nih.gov/sra/?term=SRX134769 NCBI sequence read archive SRX134768 Guaymas Basin Hydrothermal Plume Metatranscriptome - Illumina. 1 ILLUMINA (Illumina HiSeq 2000) run: 103.1M spots; 20.6G bases; 13.2Gb downloads. http://www.ncbi.nlm.nih.gov/sra/?term=SRX134768 NCBI sequence read archive SRA045655 All of the cDNA reads presented in Baker et al (2012) (doi:10.1038/ismej.2012.64) http://www.ncbi.nlm.nih.gov/sra/?term=SRA045655 NCBI GenBank JX406430 Uncultured SAR324 cluster bacterium clone GBSar324 adenosine phosphosulfate reductase alpha subunit gene; complete cds. http://www.ncbi.nlm.nih.gov/nuccore/JX406430 NCBI GenBank JX406431 Uncultured SAR324 cluster bacterium clone GBSar324 dissmilatory sulfite reductase alpha subunit (dsrA) gene; complete cds. http://www.ncbi.nlm.nih.gov/nuccore/JX406431 NCBI GenBank JX406432 Uncultured SAR324 cluster bacterium clone GBSar324 dissmilatory sulfite reductase beta subunit (dsrB) gene; complete cds. http://www.ncbi.nlm.nih.gov/nuccore/JX406432 NCBI GenBank JX406433 Uncultured SAR324 cluster bacterium clone GBSar324 16S ribosomal RNA gene; partial sequence. http://www.ncbi.nlm.nih.gov/nuccore/JX406433 DOE JGI-IMG/MER 2061766003 Hydrothermal vent microbial communities from Guaymas and Carmen Basins; Gulf of California; Sample 457; est. size 136 Mb. JGI Portal: http://genome.jgi.doe.gov/IMG_2061766003/IMG_2061766003.info.html https://img.jgi.doe.gov/cgi-bin/mer/main.cgi?section=TaxonDetail&page=taxonDetail&taxon_oid=2061766003 DOE JGI-IMG/MER 3300001683 Hydrothermal vent plume microbial communities from Guaymas Basin; Gulf of California; IDBA assembly; est. size 572 Mb. JGI Portal: http://genome.jgi.doe.gov/IMG_3300001683/IMG_3300001683.info.html https://img.jgi.doe.gov/cgi-bin/mer/main.cgi?section=TaxonDetail&page=taxonDetail&taxon_oid=3300001683 DOE JGI-IMG/MER 2236347000 Hydrothermal vent plume microbial communities from Guaymas Basin; Gulf of Cal.; transcript assembly; est. size 21 Mb. JGI Portal: http://genome.jgi.doe.gov/IMG_2236347000/IMG_2236347000.info.html https://img.jgi.doe.gov/cgi-bin/mer/main.cgi?section=TaxonDetail&page=taxonDetail&taxon_oid=2236347000