Dataset: Pacific Ocean Viral Line P metagenomes with depth, temperature and oxygen from CCGS John P. Tully JPT_2009-03, JPT_2009-09, JPT_2009-10 along Line P, eastern N. Pacific off British Columbia from Jan.-Aug.2009 (ENP viral community project)

ValidatedFinal no updates expectedVersion 2014-09-26 (2014-09-26)Dataset Type:Cruise Results

Principal Investigator: Matthew Sullivan (University of Arizona)

BCO-DMO Data Manager: Nancy Copley (Woods Hole Oceanographic Institution)


Program: Line P (Line P)

Project: Targeted and comparative viral community genomics of the Eastern North Pacific (ENP viral community)

This dataset includes metadata for virus metagenome samples from the Line P transect, an Eastern North Pacific Ocean transect from Vancouver to Ocean Station Papa sampling at 10 to 2000 meters at stations P4 (48 N, 126W), P12 (48N, 130W), and P26 (50N, 144W).

All metagenomic sequences used in the analysis are available at CAMERA under the project accessions: CAM_P_0000915. http://camera.crbs.ucsd.edu/projects/details.php?id=CAM_P_0000915 "Pacific Ocean Virus (POV) Protein Clusters.

Relevant References:

Hurwitz, B.L., & Sullivan, M.B. (2013). The Pacific Ocean Virome (POV): A marine viral metagenomic dataset and associated protein clusters for quantitative viral ecology. PLoS One. 8(2), e57355. doi:10.1371/journal.pone.0057355.

Hurwitz, B.L., Hallam, S.J., & Sullivan, M.B. (2013). Metabolic reprogramming by viruses in the sunlit and dark ocean. Genome Biol. 14:R123. doi:10.1186/gb-2013-14-11-r123

Hurwitz, B.L., Brum, J.R., & Sullivan, M.B. (2014). Depth-stratified functional and taxonomic niche specialization in the ‘core’ and ‘flexible’ Pacific Ocean Virome. ISME J. doi:10.1038/ismej.2014.143

Hurwitz, B.L., Westveld, A.H., Brum, J.R., & Sullivan, M.B. (2014). Modeling ecological drivers in marine viral communities using comparative metagenomics and network analyses. PNAS. doi:10.1073/pnas.1319778111


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