http://lod.bco-dmo.org/id/dataset/1010763
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2026-10-23
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
TEP and CSP particle concentrations from incubations collected from Station ALOHA and 31ºN at 5m and 125m in the North Pacific in June 2021 on the R/V Kilo Moana cruise KM2108
2026-10-23
publication
2026-10-23
revision
BCO-DMO Linked Data URI
2026-10-23
creation
http://lod.bco-dmo.org/id/dataset/1010763
Robert T. Letscher
University of New Hampshire
principalInvestigator
Kieran Curran
University of New Hampshire
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Letscher, R. T., Curran, K. (2026) TEP and CSP particle concentrations from incubations collected from Station ALOHA and 31ºN at 5m and 125m in the North Pacific in June 2021 on the R/V Kilo Moana cruise KM2108. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2026-10-23 [if applicable, indicate subset used]. http://lod.bco-dmo.org/id/dataset/1010763 [access date]
Methods and Sampling: <p>Seawater samples were collected from 22˚45’N &nbsp;(S(5m), S(125m)) and &nbsp;31˚N (N(5m), N(125m)) in June 2021 at 5m and at 125m. At each station and depth, approximately 100 liters of seawater were collected and the following treatments were conducted in triplicate by placing 10L of initial volume into acid-cleaned and rinsed 10 L HDPE amber carboys (Justrite ®): (1) Whole water (W), 100% seawater; (2) Filtrate (F), 0.2 µm-filtered water; and (3) Mixed (M), 80% filtrate and 20% whole water.&nbsp;</p>
<p>For the F and M treatments, gravity filtration was used through an in-line Pall Acropak 1000 (0.8/0.2 µm) filter attached directly to the 50 L carboy spigot with silicone tubing. The incubation carboys were then stored in the dark within two deckboard environmental chambers maintained at the <em>in-situ</em> temperatures by use of recirculating surface or chilled (closed loop) seawater. The experiments were performed over a period of 80-100 hours, experiments S(5m), S(125m), and N(125m) were sampled at 4 discrete time points, and experiment N(5m) at 3 time points, after the incubation initiation, spaced at ~1-1.5 day intervals.</p>
<p>TEP and CSP particles were collected onto 0.4 µm polycarbonate filters from 1 liter each of incubation subsample filtrate collected for nutrient analysis. Filtration was achieved using a peristaltic pump and silicone tubing through a 25 mm polycarbonate filter holder. Filters containing particles were immediately stained with Alcian blue (TEP) or Coomassie blue (CSP) dyes and stored frozen at -20 degC until analysis on shore back at the University of New Hampshire. TEP and CSP concentrations were determined spectrophotometrically following the protocols of <u>Bittar et al., (2018)</u> for TEP and <u>Cisternas-Novoa et al.,(2015)</u> for CSP with minor modifications, and standardized with xanthan gum and bovine albumen, respectively.&nbsp;</p>
<p>Incubation samples collected from TEP/CSP filtering were put into 40 mL glass EPA vials with silicone septa tops and frozen at -20degC until analysis on shore back at the University of New Hampshire. Phosphate concentrations were measured using Shimadzu UV-1800 Dual Beam UV-Vis Spectrophotometer, and Nitrate concentrations were measured using Thermo Scientific 42iQ NO-NO2-NOx Analyzer. Total organic carbon was measured Shimadzu TOC-V CSH with TNM-1 and ASI-V Autosampler. All were measured at the University of New Hampshire. Dissolved organic phosphorus and dissolved organic nitrogen were computed after subtracting the relevant inorganic nutrient concentrations from the measured total dissolved phosphorus (TDP) and total dissolved nitrogen concentrations (TDN).&nbsp;</p>
<p>For INT, at each incubation time point, incubation water was subsampled and analyzed following the <u>García-Martín et al., (2019)</u> method. The INT reagent was added to the sample and placed in the incubation tank for 1.5 hours, and then placed in a -20ºC freezer for later laboratory analysis. Once samples were at the UNH laboratory, samples were then added to acrylic 1 cm pathlength cuvettes and run on a Shimadzu UV-Vis spectrophotometer to measure the absorbance at 485 nm.&nbsp;</p>
<p>For cells, at each time point, samples were fixed with 0.01% glutaraldehyde and stored in a -80 °C freezer until they were measured at the UNH laboratory using a flow cytometer (Miltenyi BiotecMACSQuant VYB) with SYBR green as a DNA stain (Gasol &amp; Del Giorgio, 2000). For measuring α-glucosidases, the incubated water was subsampled and 25 µL of 1mM MUF-a-D-glucopyranoside solution was added and shaken. During a 24-hours- period the fluorescence readings were performed at an excitation of 365-395 nm and emission of 440-470 nm using a handheld Turner® TBS-380 mini UV fluorometer. The fluorescence readings were calibrated using the MUF standard solution which was prepared within the range 10 – 250 μM MUF, with the slope and time duration of the 4-point glucosidase incubation at each time used to convert to nM C hr<sup>-1</sup> rates.&nbsp;</p>
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1923687 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1923687
onGoing
Robert T. Letscher
University of New Hampshire
603-862-1008
Earth Sciences & Ocean Process Analysis Laboratory 142 Morse Hall
Durham
NH
USA
robert.letscher@unh.edu
pointOfContact
Kieran Curran
University of New Hampshire
kieran.curran@unh.edu
pointOfContact
asNeeded
Dataset Version: 1
Unknown
KM2108
service
Deployment Activity
subtropical North Pacific Ocean
place
Locations
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
Collaborative Research: Transparent exopolymer and phytoplankton vertical migration as sources for preformed nitrate anomalies in the subtropical N. Pacific Ocean
https://osprey.bco-dmo.org/project/772658
Collaborative Research: Transparent exopolymer and phytoplankton vertical migration as sources for preformed nitrate anomalies in the subtropical N. Pacific Ocean
<p><em>NSF Award Abstract:</em><br />
The ocean is usually layered, with light and oxygen in the warmer surface and nutrients at the cooler depths. Biological and physical processes determine this distribution. Marine algae grow in the well-lit upper layers but need nutrients to grow. However, in the subtropics, the ocean's largest biome, the relationship between oxygen and nitrate (a key nutrient required for photosynthesis) is different from expected. Two processes could explain this. Nutrients could be transported upward by migrating giant single-celled algae (phytoplankton). Another explanation is that the production of an organic material called transparent exopolymer (TEP) takes up carbon without using nutrients or exporting carbon to depth, as would occur in photosynthesis. While both processes could be occurring, the relative contribution of migrating phytoplankton versus TEP would tell us whether the observed oxygen pattern in the upper ocean results from photosynthesis. This problem relates to the general question of where and how nutrients reach the well-lit surface waters to enable photosynthesis. These hypotheses are tested at the Hawaii Ocean Time-Series using in-situ camera systems to image and quantify the giant phytoplankton and direct water samples to measure the vertical distribution of TEP. The data are entered into numerical models to calculate the nitrate to oxygen relationships and add information about the carbon cycle. In addition to training of undergraduate students and a postdoctoral fellow, the cruises provide an opportunity to prepare a cadre of communication fellows who will develop materials and media, including videos, to translate this highly complex scientific concepts for the general public. The social media campaign #SaveOur70 provides a valuable venue to reach and engage with the public.</p>
<p>Quantifying nutrient transport, utilization, and its relationship to carbon drawdown in the subtropical gyres is fundamental to our understanding of the carbon cycle. Geochemical distributions from the well-characterized time-series sites near Hawaii and Bermuda have long-served to identify previously unknown links between subsurface nitrate fields, summertime dissolved inorganic carbon (DIC) drawdown, and net community production in the absence of known nutrient sources. Two recently suggested processes rise to prominence to explain anomalies in subtropical distributions of dissolved carbon, oxygen, and nitrate in the upper ocean: 1) nutrient transport by giant phytoplankton that vertically migrate, and 2) cycling of low N organic matter between the mixed layer and the upper nutricline as transparent exopolymer particles (TEP) or gel-like organic material (GLOM). While linked at a fundamental level (phytoplankton are TEP producers), the outcome of the two processes are distinct. Vertical migration of phytoplankton is an active transport of nitrate, acquired in the nutricline, to the surface. There is an implication of subsequent reduction, photosynthetic carbon fixation and eventual export. TEP/GLOM cycling results in apparent DIC drawdown but there is no net export out of the surface layer and no requirement for additional nutrient sources in the mixed layer. This project collects the data to quantify the contribution of these two processes to the observed anomalies in nitrate to oxygen distribution at the time-series station at Hawaii (HOT). This is accomplished by enumerating the vertically migrating, aflagellate flora (VMF), implementing a 1-D model on vertical migration, and coupling these results with a 1-D model of the contribution of N-poor carbon cycling patterns in the upper water column derived from TEP and carbohydrate measurements. The combined VMF and TEP/GLOM 1-D models are used to model the dissolved oxygen, carbon, and nitrate budgets at HOT allowing for attribution of both hypothesized processes to the observed preformed nitrate distribution, its formation rate, and summertime inorganic carbon drawdown.</p>
TEP and phytoplankton migration
largerWorkCitation
project
eng; USA
oceans
subtropical North Pacific Ocean
-158
-156
22.45
31
2021-06-05
2021-06-15
North Pacific Gyre, Hawaii Ocean Time-Series
0
BCO-DMO catalogue of parameters from TEP and CSP particle concentrations from incubations collected from Station ALOHA and 31ºN at 5m and 125m in the North Pacific in June 2021 on the R/V Kilo Moana cruise KM2108
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
https://osprey.bco-dmo.org/dataset/1010763/data/download
download
onLine
dataset
<p>Seawater samples were collected from 22˚45’N &nbsp;(S(5m), S(125m)) and &nbsp;31˚N (N(5m), N(125m)) in June 2021 at 5m and at 125m. At each station and depth, approximately 100 liters of seawater were collected and the following treatments were conducted in triplicate by placing 10L of initial volume into acid-cleaned and rinsed 10 L HDPE amber carboys (Justrite ®): (1) Whole water (W), 100% seawater; (2) Filtrate (F), 0.2 µm-filtered water; and (3) Mixed (M), 80% filtrate and 20% whole water.&nbsp;</p>
<p>For the F and M treatments, gravity filtration was used through an in-line Pall Acropak 1000 (0.8/0.2 µm) filter attached directly to the 50 L carboy spigot with silicone tubing. The incubation carboys were then stored in the dark within two deckboard environmental chambers maintained at the <em>in-situ</em> temperatures by use of recirculating surface or chilled (closed loop) seawater. The experiments were performed over a period of 80-100 hours, experiments S(5m), S(125m), and N(125m) were sampled at 4 discrete time points, and experiment N(5m) at 3 time points, after the incubation initiation, spaced at ~1-1.5 day intervals.</p>
<p>TEP and CSP particles were collected onto 0.4 µm polycarbonate filters from 1 liter each of incubation subsample filtrate collected for nutrient analysis. Filtration was achieved using a peristaltic pump and silicone tubing through a 25 mm polycarbonate filter holder. Filters containing particles were immediately stained with Alcian blue (TEP) or Coomassie blue (CSP) dyes and stored frozen at -20 degC until analysis on shore back at the University of New Hampshire. TEP and CSP concentrations were determined spectrophotometrically following the protocols of <u>Bittar et al., (2018)</u> for TEP and <u>Cisternas-Novoa et al.,(2015)</u> for CSP with minor modifications, and standardized with xanthan gum and bovine albumen, respectively.&nbsp;</p>
<p>Incubation samples collected from TEP/CSP filtering were put into 40 mL glass EPA vials with silicone septa tops and frozen at -20degC until analysis on shore back at the University of New Hampshire. Phosphate concentrations were measured using Shimadzu UV-1800 Dual Beam UV-Vis Spectrophotometer, and Nitrate concentrations were measured using Thermo Scientific 42iQ NO-NO2-NOx Analyzer. Total organic carbon was measured Shimadzu TOC-V CSH with TNM-1 and ASI-V Autosampler. All were measured at the University of New Hampshire. Dissolved organic phosphorus and dissolved organic nitrogen were computed after subtracting the relevant inorganic nutrient concentrations from the measured total dissolved phosphorus (TDP) and total dissolved nitrogen concentrations (TDN).&nbsp;</p>
<p>For INT, at each incubation time point, incubation water was subsampled and analyzed following the <u>García-Martín et al., (2019)</u> method. The INT reagent was added to the sample and placed in the incubation tank for 1.5 hours, and then placed in a -20ºC freezer for later laboratory analysis. Once samples were at the UNH laboratory, samples were then added to acrylic 1 cm pathlength cuvettes and run on a Shimadzu UV-Vis spectrophotometer to measure the absorbance at 485 nm.&nbsp;</p>
<p>For cells, at each time point, samples were fixed with 0.01% glutaraldehyde and stored in a -80 °C freezer until they were measured at the UNH laboratory using a flow cytometer (Miltenyi BiotecMACSQuant VYB) with SYBR green as a DNA stain (Gasol &amp; Del Giorgio, 2000). For measuring α-glucosidases, the incubated water was subsampled and 25 µL of 1mM MUF-a-D-glucopyranoside solution was added and shaken. During a 24-hours- period the fluorescence readings were performed at an excitation of 365-395 nm and emission of 440-470 nm using a handheld Turner® TBS-380 mini UV fluorometer. The fluorescence readings were calibrated using the MUF standard solution which was prepared within the range 10 – 250 μM MUF, with the slope and time duration of the 4-point glucosidase incubation at each time used to convert to nM C hr<sup>-1</sup> rates.&nbsp;</p>
Specified by the Principal Investigator(s)
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
Cruise: KM2108
KM2108
R/V Kilo Moana
Community Standard Description
International Council for the Exploration of the Sea
R/V Kilo Moana
vessel
KM2108
Robert T. Letscher
R/V Kilo Moana
Community Standard Description
International Council for the Exploration of the Sea
R/V Kilo Moana
vessel