http://lod.bco-dmo.org/id/dataset/2560
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2010-06-16
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
Microzooplankton abundance and carbon biomass from R/V Thomas G. Thompson TT050, TT054 cruises in the Arabian Sea in 1995 (U.S. JGOFS Arabian Sea project)
2001-10-02
publication
2001-10-02
revision
BCO-DMO Linked Data URI
2001-10-02
creation
http://lod.bco-dmo.org/id/dataset/2560
Dr Marcia Gowing
University of California-Santa Cruz
principalInvestigator
David L. Garrison
University of California-Santa Cruz
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Gowing, M., Garrison, D. L. (2001) Microzooplankton abundance and carbon biomass from R/V Thomas G. Thompson TT050, TT054 cruises in the Arabian Sea in 1995 (U.S. JGOFS Arabian Sea project). Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version October 2, 2001 ) Version Date 2001-10-02 [if applicable, indicate subset used]. http://lod.bco-dmo.org/id/dataset/2560 [access date]
Microzooplankton abundance and carbon biomass Dataset Description: <p>Microzooplankton abundance and carbon biomass</p> Methods and Sampling: <p>See Platform deployments for cruise specific documentation</p>
Funding provided by National Science Foundation (NSF) Award Number: unknown Arabian Sea NSF
completed
Dr Marcia Gowing
University of California-Santa Cruz
USA
gowing@cats.ucsc.edu
pointOfContact
David L. Garrison
University of California-Santa Cruz
USA
dgarriso@nsf.gov
pointOfContact
asNeeded
Dataset Version: October 2, 2001
Unknown
event
sta_std
sta
cast
cast_type
bot
depth_n
nanoflag_het
nanoflag_het_C
dino_het
dino_het_C
ciliates_n
ciliates_n_C
tint
tint_C
Niskin Bottle
Trace Metal Bottle
theme
None, User defined
event
No BCO-DMO term
cast
featureType
BCO-DMO Standard Parameters
Niskin bottle
Trace Metal Bottle
instrument
BCO-DMO Standard Instruments
TT050
TT054
service
Deployment Activity
U.S. JGOFS Arabian Sea
place
Locations
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
U.S. Joint Global Ocean Flux Study
http://usjgofs.whoi.edu/
U.S. Joint Global Ocean Flux Study
The United States Joint Global Ocean Flux Study was a national component of international JGOFS and an integral part of global climate change research.
The U.S. launched the Joint Global Ocean Flux Study (JGOFS) in the late 1980s to study the ocean carbon cycle. An ambitious goal was set to understand the controls on the concentrations and fluxes of carbon and associated nutrients in the ocean. A new field of ocean biogeochemistry emerged with an emphasis on quality measurements of carbon system parameters and interdisciplinary field studies of the biological, chemical and physical process which control the ocean carbon cycle. As we studied ocean biogeochemistry, we learned that our simple views of carbon uptake and transport were severely limited, and a new "wave" of ocean science was born. U.S. JGOFS has been supported primarily by the U.S. National Science Foundation in collaboration with the National Oceanic and Atmospheric Administration, the National Aeronautics and Space Administration, the Department of Energy and the Office of Naval Research. U.S. JGOFS, ended in 2005 with the conclusion of the Synthesis and Modeling Project (SMP).
U.S. JGOFS
largerWorkCitation
program
U.S. JGOFS Arabian Sea
http://usjgofs.whoi.edu/research/arabian.html
U.S. JGOFS Arabian Sea
<p>The U.S. Arabian Sea Expedition which began in September 1994 and ended in January 1996, had three major components: a U.S. JGOFS Process Study, supported by the National Science Foundation (NSF); Forced Upper Ocean Dynamics, an Office of Naval Research (ONR) initiative; and shipboard and aircraft measurements supported by the National Aeronautics and Space Administration (NASA). The Expedition consisted of 17 cruises aboard the R/V Thomas Thompson, year-long moored deployments of five instrumented surface buoys and five sediment-trap arrays, aircraft overflights and satellite observations. Of the seventeen ship cruises, six were allocated to repeat process survey cruises, four to SeaSoar mapping cruises, six to mooring and benthic work, and a single calibration cruise which was essentially conducted in transit to the Arabian Sea.</p>
Arabian Sea
largerWorkCitation
project
eng; USA
oceans
U.S. JGOFS Arabian Sea
2001-10-02
Arabian Sea
0
BCO-DMO catalogue of parameters from Microzooplankton abundance and carbon biomass from R/V Thomas G. Thompson TT050, TT054 cruises in the Arabian Sea in 1995 (U.S. JGOFS Arabian Sea project)
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/10427.rdf
Name: event
Units: dimensionless
Description: <p>event number from event log</p>
http://lod.bco-dmo.org/id/dataset-parameter/10428.rdf
Name: sta_std
Units: unknown
Description: <p>Arabian Sea standard station identifier</p>
http://lod.bco-dmo.org/id/dataset-parameter/10429.rdf
Name: sta
Units: unknown
Description: <p>station number from event log</p>
http://lod.bco-dmo.org/id/dataset-parameter/10430.rdf
Name: cast
Units: dimensionless
Description: <p>CTD cast number</p>
http://lod.bco-dmo.org/id/dataset-parameter/10431.rdf
Name: cast_type
Units: unknown
Description: <p>CTD=CTD rosette; TM=TM rosette</p>
http://lod.bco-dmo.org/id/dataset-parameter/10432.rdf
Name: bot
Units: unknown
Description: <p>CTD bottle number - see note, please</p>
http://lod.bco-dmo.org/id/dataset-parameter/10433.rdf
Name: depth_n
Units: meters
Description: <p>nominal depth</p>
http://lod.bco-dmo.org/id/dataset-parameter/10434.rdf
Name: nanoflag_het
Units: cells/liter
Description: <p>heterotrophic nanoflagellate abundance (excluding dinoflagllates)</p>
http://lod.bco-dmo.org/id/dataset-parameter/10435.rdf
Name: nanoflag_het_C
Units: micrograms C/liter
Description: <p>heterotrophic nanoflagellate biomass (excluding dinoflagllates)</p>
http://lod.bco-dmo.org/id/dataset-parameter/10436.rdf
Name: dino_het
Units: cells/liter
Description: <p>heterotrophic dinoflagellate abundance</p>
http://lod.bco-dmo.org/id/dataset-parameter/10437.rdf
Name: dino_het_C
Units: micrograms C/liter
Description: <p>heterotrophic dinoflagellate biomass</p>
http://lod.bco-dmo.org/id/dataset-parameter/10438.rdf
Name: ciliates_n
Units: cells/liter
Description: <p>non-loricate ciliate abundance (including plastidic oligotrichs)</p>
http://lod.bco-dmo.org/id/dataset-parameter/10439.rdf
Name: ciliates_n_C
Units: micrograms C/liter
Description: <p>non-loricate ciliate biomass (including plastidic oligotrichs)</p>
http://lod.bco-dmo.org/id/dataset-parameter/10440.rdf
Name: tint
Units: cells/liter
Description: <p>tintinnid (ciliate) abundance</p>
http://lod.bco-dmo.org/id/dataset-parameter/10441.rdf
Name: tint_C
Units: micrograms C/liter
Description: <p>tintinnid (ciliate) biomass</p>
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2654
https://datadocs.bco-dmo.org/file/0A71lxASgMk1wy/microzooplankton_TT050.csv
microzooplankton_TT050.csv
Version October 2, 2001
(original version April 14, 1997)
PI: Marcia Gowing and David Garrison
dataset: Microzooplankton abundances and carbon biomass
cruise: Arabian Sea/TTN-050, Process Cruise 5
ship: R/V Thomas Thompson
download
1867
https://datadocs.bco-dmo.org/file/vmvNX3mTrNoOoE/microzooplankton_TT054.csv
microzooplankton_TT054.csv
Version October 2, 2001
(original version September 28, 1998)
PI: David Garrison and Marcia Gowing
dataset: Microzooplankton abundance and carbon biomass
cruise: Arabian Sea/TTN-054, Process Cruise 7
ship: R/V Thomas Thompson
download
https://osprey.bco-dmo.org/dataset/2560/data/download
download
onLine
dataset
<p>See Platform deployments for cruise specific documentation</p>
from Cruise: TT050
<pre>
<b>PI:</b> David Garrison and Marcia Gowing
<b>of:</b> University of California-Santa Cruz
<b>dataset:</b> Microzooplankton abundance and carbon biomass
<b>dates:</b> August 19, 1995 to September 12, 1995
<b>location:</b> N: 22.4308 S: 9.9769 W: 57.3004 E: 68.7385
<b>project/cruise:</b> Arabian Sea/TTN-050 - Process Cruise 5 (Late SW Monsoon)
<b>ship:</b> Thomas Thompson
Note: Abundance of nanoflagellates represent the 2-20 micron size class.
All other abundances represent the 20-200 micron range.
DMO note:
Marcia Gowing and David Garrison
Microzooplankton abundances & biomass
Thomas Thompson cruise TTN-050, Process Cruise 5, Arabian Sea
The following samples were collected by pooling multiple bottles of the same cast (usually 60 liters).
In the main data set, only a single bottle number is listed.
event___ sta_std sta cast bot_single bot_multi
08290158 S15 13 7 24 19-24
08290158 S15 13 7 18 13-18
08290158 S15 13 7 12 7-12
08290158 S15 13 7 6 1-6
08290252 S15 13 8 6 1-6
09010054 S11 17 3 24 19-24
09010054 S11 17 3 18 13-18
09010054 S11 17 3 12 7-12
09010054 S11 17 3 6 1-6
09010157 S11 17 4 15 10-15
09050059 S7 21 7 24 19-24
09050059 S7 21 7 18 13-18
09050059 S7 21 7 12 7-12
09050059 S7 21 7 6 1-6
09050156 S7 21 8 6 1-6
09080057 S4 24 6 24 19-24
09080057 S4 24 6 18 13-18
09080057 S4 24 6 12 7-12
09080057 S4 24 6 6 1-6
09080148 S4 24 7 6 1-6
09110048 S2 26 7 24 19-24
09110048 S2 26 7 18 13-18
09110048 S2 26 7 12 7-12
09110048 S2 26 7 6 1-6
09110138 S2 26 8 6 1-6
09121126 S1 27 1 22 21-22
09121126 S1 27 1 18 17-18
09121126 S1 27 1 14 13-14
09121126 S1 27 1 10 9-10
09121126 S1 27 1 6 5-6
</pre>
from Cruise: TT054
<pre>
<b>PI:</b> David Garrison and Marcia Gowing
<b>of:</b> University of California - Santa Cruz
<b>dataset:</b> Microzooplankton abundance and carbon biomass
<b>dates:</b> December 05, 1995 to December 24, 1995
<b>location:</b> N: 19.2079 S: 9.9674 W: 58.1373 E: 67.1739
<b>project/cruise:</b> Arabian Sea/TTN-054 - Process Cruise 7 (Early NE Monsoon)
<b>ship:</b> Thomas Thompson
Note: Abundance of nanoflagellates represent the 2-20 micron size class.
All other abundances represent the 20-200 micron range.
<a href="http://usjgofs.whoi.edu/jg/serv/jgofs/arabian/ttn-054/microzoo_note.html0{dir=usjgofs.whoi.edu/jg/dir/jgofs/arabian/ttn-054/}">DMO Note on multiple-bottle events</a>
</pre>
Specified by the Principal Investigator(s)
<pre>
David Garrison and Marcia Gowing
Microzooplankton Methods
Samples for microzooplankton biomass were obtained by taking ~ 2-liter
aliquots from standard hydrographic casts. Heterotrophic flagellates
and some nano-planktonic non-loricate ciliates were examined by
epifluorescence microscopy on samples preserved with approximately 0.5%
glutaraldehyde, concentrated on 0.8 micron, black Nuclepore filters,
and stained with the fluorochromes DAPI (Coleman 1980) and proflavin
(Haas 1982) following the protocol outlined by Verity and Sieracki
(1993). Whole water samples were preserved with buffered
paraformaldehyde. Larger heterotrophic dinoflagellates, and most of
the ciliates were enumerated from 50 or 100 ml of these preserved
samples that were settled and counted with an inverted microscope.
Biomass was estimated by converting cell volumes (calculated from
measurements of cell dimensions) using the relationship ((Log10 C =
0.94 (log10 V)-0.60); with C representing carbon as picograms per cell
and V representing total cell volume in cubic microns) for flagellates
(Eppley et al. 1970), and the relationship carbon per cell = 0.16
pgC/cubic micron (Stoecker et al. 1994).
Coleman, A.W. 1980. Enhanced staining of bacteria in natural
environments by fluorochrome staining of DNA. Limnol. Oceanogr.
25:948-951.
Eppley, R.W., F.M.H. Reid, J.D.H. Strickland. 1970. The ecology of
the plankton off La Jolla, California, in the period April through
September, 1967. (ed. J.D.H. Strickland), pt. III, Estimates of
phytoplankton crop size, growth rate and primary production. Bull.
Scripps Inst. Oceanogr. 17:33-42.
Haas, L.W. 1982. Improved epifluorescence microscopy for observing
planktonic microorganisms. Ann. Inst. Oceanogr. Paris. 58S:261-266.
Stoecker, D.K., D.J. Gifford, and M. Putt. 1994. Preservation of
marine planktonic ciliates: losses and cell shrinkage during fixation.
Mar. Ecol. Prog. Ser. 110:293-299.
Verity, P.G. and M.E.Sieracki. 1993. Use of color image analysis and
epifluorescence microscopy to measure plankton biomass. In: (Kemp,
P.F., B.F. Sherr,E.B. Sherr, and J.C. Cole, eds.) Aquatic Microbial
Ecology. pp. 327-338. Lewis Publishers, Boca Raton.
</pre>
from Cruise: TT050 <pre>
David Garrison and Marcia Gowing
Microzooplankton Methods
Samples for microzooplankton biomass were obtained by taking ~ 2-liter
aliquots from standard hydrographic casts. Heterotrophic flagellates
and some nano-planktonic non-loricate ciliates were examined by
epifluorescence microscopy on samples preserved with approximately 0.5%
glutaraldehyde, concentrated on 0.8 micron, black Nuclepore filters,
and stained with the fluorochromes DAPI (Coleman 1980) and proflavin
(Haas 1982) following the protocol outlined by Verity and Sieracki
(1993). Whole water samples were preserved with buffered
paraformaldehyde. Larger heterotrophic dinoflagellates, and most of
the ciliates were enumerated from 50 or 100 ml of these preserved
samples that were settled and counted with an inverted microscope.
Biomass was estimated by converting cell volumes (calculated from
measurements of cell dimensions) using the relationship ((Log10 C =
0.94 (log10 V)-0.60); with C representing carbon as picograms per cell
and V representing total cell volume in cubic microns) for flagellates
(Eppley et al. 1970), and the relationship carbon per cell = 0.16
pgC/cubic micron (Stoecker et al. 1994).
Coleman, A.W. 1980. Enhanced staining of bacteria in natural
environments by fluorochrome staining of DNA. Limnol. Oceanogr.
25:948-951.
Eppley, R.W., F.M.H. Reid, J.D.H. Strickland. 1970. The ecology of
the plankton off La Jolla, California, in the period April through
September, 1967. (ed. J.D.H. Strickland), pt. III, Estimates of
phytoplankton crop size, growth rate and primary production. Bull.
Scripps Inst. Oceanogr. 17:33-42.
Haas, L.W. 1982. Improved epifluorescence microscopy for observing
planktonic microorganisms. Ann. Inst. Oceanogr. Paris. 58S:261-266.
Stoecker, D.K., D.J. Gifford, and M. Putt. 1994. Preservation of
marine planktonic ciliates: losses and cell shrinkage during fixation.
Mar. Ecol. Prog. Ser. 110:293-299.
Verity, P.G. and M.E.Sieracki. 1993. Use of color image analysis and
epifluorescence microscopy to measure plankton biomass. In: (Kemp,
P.F., B.F. Sherr,E.B. Sherr, and J.C. Cole, eds.) Aquatic Microbial
Ecology. pp. 327-338. Lewis Publishers, Boca Raton.
</pre>
from Cruise: TT054 <pre>
David Garrison and Marcia Gowing
Microzooplankton Methods
Samples for microzooplankton biomass were obtained by taking ~ 2-liter
aliquots from standard hydrographic casts. Heterotrophic flagellates
and some nano-planktonic non-loricate ciliates were examined by
epifluorescence microscopy on samples preserved with approximately 0.5%
glutaraldehyde, concentrated on 0.8 micron, black Nuclepore filters,
and stained with the fluorochromes DAPI (Coleman 1980) and proflavin
(Haas 1982) following the protocol outlined by Verity and Sieracki
(1993). Whole water samples were preserved with buffered
paraformaldehyde. Larger heterotrophic dinoflagellates, and most of
the ciliates were enumerated from 50 or 100 ml of these preserved
samples that were settled and counted with an inverted microscope.
Biomass was estimated by converting cell volumes (calculated from
measurements of cell dimensions) using the relationship ((Log10 C =
0.94 (log10 V)-0.60); with C representing carbon as picograms per cell
and V representing total cell volume in cubic microns) for flagellates
(Eppley et al. 1970), and the relationship carbon per cell = 0.16
pgC/cubic micron (Stoecker et al. 1994).
Coleman, A.W. 1980. Enhanced staining of bacteria in natural
environments by fluorochrome staining of DNA. Limnol. Oceanogr.
25:948-951.
Eppley, R.W., F.M.H. Reid, J.D.H. Strickland. 1970. The ecology of
the plankton off La Jolla, California, in the period April through
September, 1967. (ed. J.D.H. Strickland), pt. III, Estimates of
phytoplankton crop size, growth rate and primary production. Bull.
Scripps Inst. Oceanogr. 17:33-42.
Haas, L.W. 1982. Improved epifluorescence microscopy for observing
planktonic microorganisms. Ann. Inst. Oceanogr. Paris. 58S:261-266.
Stoecker, D.K., D.J. Gifford, and M. Putt. 1994. Preservation of
marine planktonic ciliates: losses and cell shrinkage during fixation.
Mar. Ecol. Prog. Ser. 110:293-299.
Verity, P.G. and M.E.Sieracki. 1993. Use of color image analysis and
epifluorescence microscopy to measure plankton biomass. In: (Kemp,
P.F., B.F. Sherr,E.B. Sherr, and J.C. Cole, eds.) Aquatic Microbial
Ecology. pp. 327-338. Lewis Publishers, Boca Raton.
</pre>
Specified by the Principal Investigator(s)
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
Niskin Bottle
Niskin Bottle
PI Supplied Instrument Name: Niskin Bottle PI Supplied Instrument Description:CTD/Niskin Rosette bottles. Instrument Name: Niskin bottle Instrument Short Name:Niskin bottle Instrument Description: A Niskin bottle (a next generation water sampler based on the Nansen bottle) is a cylindrical, non-metallic water collection device with stoppers at both ends. The bottles can be attached individually on a hydrowire or deployed in 12, 24, or 36 bottle Rosette systems mounted on a frame and combined with a CTD. Niskin bottles are used to collect discrete water samples for a range of measurements including pigments, nutrients, plankton, etc. Community Standard Description: http://vocab.nerc.ac.uk/collection/L22/current/TOOL0412/
Trace Metal Bottle
Trace Metal Bottle
PI Supplied Instrument Name: Trace Metal Bottle PI Supplied Instrument Description:Trace Metal (TM) Rosette bottles Instrument Name: Trace Metal Bottle Instrument Short Name:TM Bottle Instrument Description: Trace metal (TM) clean rosette bottle used for collecting trace metal clean seawater samples. Community Standard Description: http://vocab.nerc.ac.uk/collection/L05/current/30/
Cruise: TT050
TT050
R/V Thomas G. Thompson
Community Standard Description
International Council for the Exploration of the Sea
R/V Thomas G. Thompson
vessel
TT050
Sharon L. Smith
University of Miami
Cruise: TT054
TT054
R/V Thomas G. Thompson
Community Standard Description
International Council for the Exploration of the Sea
R/V Thomas G. Thompson
vessel
TT054
Wilford D. Gardner
Texas A&M University
R/V Thomas G. Thompson
Community Standard Description
International Council for the Exploration of the Sea
R/V Thomas G. Thompson
vessel