http://lod.bco-dmo.org/id/dataset/2823
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2009-11-29
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
Video Plankton Recorder data from RVIB Nathaniel B. Palmer (NBP0103, NBP0104, NBP0202) in the Southern Ocean from 2001-2002 (SOGLOBEC project, Southern Ocean Krill project)
2011-05-09
publication
2011-05-09
revision
BCO-DMO Linked Data URI
2011-05-09
creation
http://lod.bco-dmo.org/id/dataset/2823
Carin J. Ashjian
Woods Hole Oceanographic Institution
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Ashjian, C. J. (2011) Video Plankton Recorder data from RVIB Nathaniel B. Palmer (NBP0103, NBP0104, NBP0202) in the Southern Ocean from 2001-2002 (SOGLOBEC project, Southern Ocean Krill project). Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 2011-05-09) Version Date 2011-05-09 [if applicable, indicate subset used]. http://lod.bco-dmo.org/id/dataset/2823 [access date]
Video Plankton Recorder data from 2001, fall and winter. Dataset Description: <h3 align="center">Video Plankton Recorder Data</h3>
<p>&nbsp;</p>
<p>These data are from images of plankton and particles collected using the Video Plankton Recorder (VPR), a camera system mounted on the <u>BIO </u>-Optical <u>M</u>ulti-frequency <u>A</u>coustical and <u>P</u>hysical <u>E</u>nvironmental <u>R</u>ecorder (BIOMAPER II)<sup>1</sup> data acquisition system.</p>
<p>BIOMAPERII is a towed package consisting of a number of independent observational components: a multi-frequency sonar (Acoustics) system, a video plankton recorder (VPR) system, and an environmental sensor system (ESS).&nbsp;</p>
<p>Companion object:&nbsp; <a href="http://globec.whoi.edu/jg/serv/globec/soglobec/biomaperII.brev0%7Bdir=globec.whoi.edu/jg/dir/globec/soglobec/,info=globec.whoi.edu/jg/info/globec/soglobec/biomaperII%7D">biomaperII</a>. <br />
&sup1;Wiebe, P.H., et al., 2002, BIOMAPER-II: An Integrated Instrument Platform for Coupled Biological and Physical Measurements in Coastal and Oceanic Regimes. IEEE Journal of Oceanic Engineering, <b>27(3)</b>:700-716.</p>
<p><b>Methodology</b><br />
Detailed discussion of the data and sampling methods used here can be found in C.J. Ashjian et al., 2008. Distribution of larval krill and zooplankton in association with hydrography in Marguerite Bay, Antarctic Peninsula, in austral fall and winter 2001 described using the Video Plankton Recorder. Deep- Sea Research II <b>55/3-4</b>(2008), pp. 455-471.</p>
<p><b>Any questions, contact:</b><br />
Carin Ashjian, Associate Scientist<br />
Woods Hole Oceanographic Institution<br />
Woods Hole, MA 02543 <br />
voice: (508) 289-3457 <br />
fax: (508) 457-2169 <br />
e-mail: <a href="mailto:cashjian@whoi.edu">cashjian@whoi.edu</a><br />
<br />
<i>last updated 9 May 2011, njc </i></p> Methods and Sampling: <p>These data are from images of plankton and particles collected using the Video Plankton Recorder (VPR), a camera system mounted on the BIO -Optical Multi-frequency Acoustical and Physical Environmental Recorder (BIOMAPER II)1 data acquisition system. BIOMAPERII is a towed package consisting of a number of independent observational components: a multi-frequency sonar (Acoustics) system, a video plankton recorder (VPR) system, and an environmental sensor system (ESS).</p>
Funding provided by NSF Antarctic Sciences (NSF ANT) Award Number: ANT-9910307 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=9910307
completed
Carin J. Ashjian
Woods Hole Oceanographic Institution
508-289-2409
Redfield 2-22, MS-33
Woods Hole
MA
02543
USA
cashjian@whoi.edu
pointOfContact
asNeeded
Dataset Version: 2011-05-09
Unknown
cruiseid
year
yrday0_gmt
month_gmt
day_gmt
time_gmt
lat
lon
press
potemp
sal
sigma_0
flvolts
trans_v
depth_w
copepods
larvaceans
larval_euph
marine_snow
pteropods
radiolarians
polychaetes
diatoms
algal_mat
BIo-Optical Multi-frequency Acoustical and Physical Environmental Recorder II
Video Plankton Recorder
theme
None, User defined
cruise id
year
yrday0_gmt
month_gmt
day_gmt
time_gmt
latitude
longitude
water pressure
potential temperature
salinity
sigma-theta
flvolt
light transmission (volts)
depth_w
No BCO-DMO term
featureType
BCO-DMO Standard Parameters
BIo-Optical Multi-frequency Acoustical and Physical Environmental Recorder II
Video Plankton Recorder
instrument
BCO-DMO Standard Instruments
NBP0103
NBP0104
NBP0202
service
Deployment Activity
Southern Ocean
place
Locations
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
U.S. GLOBal ocean ECosystems dynamics
http://www.usglobec.org/
U.S. GLOBal ocean ECosystems dynamics
U.S. GLOBEC (GLOBal ocean ECosystems dynamics) is a research program organized by oceanographers and fisheries scientists to address the question of how global climate change may affect the abundance and production of animals in the sea.
The U.S. GLOBEC Program currently had major research efforts underway in the Georges Bank / Northwest Atlantic Region, and the Northeast Pacific (with components in the California Current and in the Coastal Gulf of Alaska). U.S. GLOBEC was a major contributor to International GLOBEC efforts in the Southern Ocean and Western Antarctic Peninsula (WAP).
U.S. GLOBEC
largerWorkCitation
program
U.S. GLOBal ocean ECosystems dynamics
http://www.usglobec.org/
U.S. GLOBal ocean ECosystems dynamics
U.S. GLOBEC (GLOBal ocean ECosystems dynamics) is a research program organized by oceanographers and fisheries scientists to address the question of how global climate change may affect the abundance and production of animals in the sea.
The U.S. GLOBEC Program currently had major research efforts underway in the Georges Bank / Northwest Atlantic Region, and the Northeast Pacific (with components in the California Current and in the Coastal Gulf of Alaska). U.S. GLOBEC was a major contributor to International GLOBEC efforts in the Southern Ocean and Western Antarctic Peninsula (WAP).
U.S. GLOBEC
largerWorkCitation
program
U.S. GLOBEC Southern Ocean
http://www.ccpo.odu.edu/Research/globec_menu.html
U.S. GLOBEC Southern Ocean
<p>The fundamental objectives of United States Global Ocean Ecosystems Dynamics (U.S. GLOBEC) Program are dependent upon the cooperation of scientists from several disciplines. Physicists, biologists, and chemists must make use of data collected during U.S. GLOBEC field programs to further our understanding of the interplay of physics, biology, and chemistry. Our objectives require quantitative analysis of interdisciplinary data sets and, therefore, data must be exchanged between researchers. To extract the full scientific value, data must be made available to the scientific community on a timely basis.</p>
SOGLOBEC
largerWorkCitation
project
GLOBEC: Winter Distribution and Success of Southern Ocean Krill
https://osprey.bco-dmo.org/project/616193
GLOBEC: Winter Distribution and Success of Southern Ocean Krill
<p>The U.S. Global Ocean Ecosystems Dynamics (U.S. GLOBEC) program has the goal of understanding and ultimately predicting how populations of marine animal species respond to natural and anthropogenic changes in climate. Research in the Southern Ocean (SO) indicates strong coupling between climatic processes and ecosystem dynamics via the annual formation and destruction of sea ice. The Southern Ocean GLOBEC Program (SO GLOBEC) will investigate the dynamic relationship between physical processes and ecosystem responses through identification of critical parameters that affect the distribution, abundance and population dynamics of target species. The overall goals of the SO GLOBEC program are to elucidate shelf circulation processes and their effect on sea ice formation and krill distribution, and to examine the factors which govern krill survivorship and availability to higher trophic levels, including penguins, seals and whales. The focus of the U.S. contribution to the international SO GLOBEC program will be on winter processes. This component will focus on juvenile and adult krill and mesozooplankton prey distribution and abundance using a sophisticated instrument package, BIOMAPPER II, which is equipped with an acoustic backscatter sonar system, a video plankton recorder and an environmental sensor system. The system is used in large-scale studies. Additionally, a remotely-operative vehicle will be used to map the distribution and behavior of krill under ice. The result of the integrated SO GLOBEC program will be to improve the predictability of living marine resources, especially with respect to local and global climatic shifts.</p>
Southern Ocean Krill
largerWorkCitation
project
eng; USA
oceans
Southern Ocean
2011-05-09
Southern Ocean
0
BCO-DMO catalogue of parameters from Video Plankton Recorder data from RVIB Nathaniel B. Palmer (NBP0103, NBP0104, NBP0202) in the Southern Ocean from 2001-2002 (SOGLOBEC project, Southern Ocean Krill project)
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/13819.rdf
Name: cruiseid
Units: unknown
Description: <p>cruise identification</p>
http://lod.bco-dmo.org/id/dataset-parameter/13820.rdf
Name: year
Units: unknown
Description: <p>year, i.e. 2001, GMT</p>
http://lod.bco-dmo.org/id/dataset-parameter/13821.rdf
Name: yrday0_gmt
Units: YYY.Y
Description: <p>Year day where Jan 1 = year day 0, GMT</p>
http://lod.bco-dmo.org/id/dataset-parameter/13822.rdf
Name: month_gmt
Units: unknown
Description: <p>month of year, GMT, i.e. 01-12</p>
http://lod.bco-dmo.org/id/dataset-parameter/13823.rdf
Name: day_gmt
Units: unknown
Description: <p> day of month, GMT, i.e. 01-31 </p>
http://lod.bco-dmo.org/id/dataset-parameter/13840.rdf
Name: time_gmt
Units: unknown
Description: <p>time of day, GMT</p>
http://lod.bco-dmo.org/id/dataset-parameter/13843.rdf
Name: lat
Units: decimal degrees
Description: <p>negative = South</p>
http://lod.bco-dmo.org/id/dataset-parameter/13845.rdf
Name: lon
Units: decimal degrees
Description: <p>negative = West</p>
http://lod.bco-dmo.org/id/dataset-parameter/13849.rdf
Name: press
Units: decibars
Description: <p>depth of sample/data point, reported as pressure</p>
http://lod.bco-dmo.org/id/dataset-parameter/13850.rdf
Name: potemp
Units: degrees C
Description: <p>potential temperature</p>
http://lod.bco-dmo.org/id/dataset-parameter/13915.rdf
Name: sal
Units: dimensionless
Description: <p>salinity, PSS</p>
http://lod.bco-dmo.org/id/dataset-parameter/13916.rdf
Name: sigma_0
Units: kilograms/cubic meter
Description: <p>potential density (sigma theta) </p>
http://lod.bco-dmo.org/id/dataset-parameter/13917.rdf
Name: flvolts
Units: volts
Description: <p>fluorescence (volts 0-5)</p>
http://lod.bco-dmo.org/id/dataset-parameter/13918.rdf
Name: trans_v
Units: volts
Description: <p>light transmission, reported as volts </p>
http://lod.bco-dmo.org/id/dataset-parameter/13919.rdf
Name: depth_w
Units: meters
Description: <p>water depth in meters </p>
http://lod.bco-dmo.org/id/dataset-parameter/13920.rdf
Name: copepods
Units: number/Liter
Description: <p>number of copepods</p>
http://lod.bco-dmo.org/id/dataset-parameter/13921.rdf
Name: larvaceans
Units: number/Liter
Description: <p>number of larvaceans per liter</p>
http://lod.bco-dmo.org/id/dataset-parameter/13922.rdf
Name: larval_euph
Units: number/Liter
Description: <p>larval euphausiids</p>
http://lod.bco-dmo.org/id/dataset-parameter/13923.rdf
Name: marine_snow
Units: number/Liter
Description: <p>Particles of plankton</p>
http://lod.bco-dmo.org/id/dataset-parameter/13924.rdf
Name: pteropods
Units: number/Liter
Description: <p>number of pteropods per liter</p>
http://lod.bco-dmo.org/id/dataset-parameter/13925.rdf
Name: radiolarians
Units: number/Liter
Description: <p>number of radiolarians per liter</p>
http://lod.bco-dmo.org/id/dataset-parameter/13926.rdf
Name: polychaetes
Units: number/Liter
Description: <p>number of polychaetes per liter</p>
http://lod.bco-dmo.org/id/dataset-parameter/24250.rdf
Name: diatoms
Units: number/Liter
Description: <p>diatoms</p>
http://lod.bco-dmo.org/id/dataset-parameter/24251.rdf
Name: algal_mat
Units: number/Liter
Description: <p>algal mats</p>
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
87861743
https://datadocs.bco-dmo.org/file/P66GwDys44wNM8/vpr_cashjian.csv
vpr_cashjian.csv
Primary data file for dataset ID 2823
download
https://osprey.bco-dmo.org/dataset/2823/data/download
download
onLine
dataset
<p>These data are from images of plankton and particles collected using the Video Plankton Recorder (VPR), a camera system mounted on the BIO -Optical Multi-frequency Acoustical and Physical Environmental Recorder (BIOMAPER II)1 data acquisition system. BIOMAPERII is a towed package consisting of a number of independent observational components: a multi-frequency sonar (Acoustics) system, a video plankton recorder (VPR) system, and an environmental sensor system (ESS).</p>
from Cruise: NBP0103 These data are from images of plankton and particles collected using the Video Plankton Recorder (VPR), a camera system mounted on the BIO -Optical Multi-frequency Acoustical and Physical Environmental Recorder (BIOMAPER II)1 data acquisition system.
BIOMAPERII is a towed package consisting of a number of independent observational components: a multi-frequency sonar (Acoustics) system, a video plankton recorder (VPR) system, and an environmental sensor system (ESS).
from Cruise: NBP0104 These data are from images of plankton and particles collected using the Video Plankton Recorder (VPR), a camera system mounted on the BIO -Optical Multi-frequency Acoustical and Physical Environmental Recorder (BIOMAPER II)1 data acquisition system.
from Cruise: NBP0202 <p>VPR data</p>
Specified by the Principal Investigator(s)
<p>Detailed discussion of the data and sampling methods used here can be found in C.J. Ashjian et al., 2008. Distribution of larval krill and zooplankton in association with hydrography in Marguerite Bay, Antarctic Peninsula, in austral fall and winter 2001 described using the Video Plankton Recorder. Deep- Sea Research II 55/3-4(2008), pp. 455-471.</p>
from Cruise: NBP0103 Detailed discussion of the data and sampling methods used here can be found in C.J. Ashjian et al., 2008. Distribution of larval krill and zooplankton in association with hydrography in Marguerite Bay, Antarctic Peninsula, in austral fall and winter 2001 described using the Video Plankton Recorder. Deep- Sea Research II 55/3-4(2008), pp. 455-471.
from Cruise: NBP0104 Detailed discussion of the data and sampling methods used here can be found in C.J. Ashjian et al., 2008. Distribution of larval krill and zooplankton in association with hydrography in Marguerite Bay, Antarctic Peninsula, in austral fall and winter 2001 described using the Video Plankton Recorder. Deep- Sea Research II 55/3-4(2008), pp. 455-471.
Specified by the Principal Investigator(s)
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
BIo-Optical Multi-frequency Acoustical and Physical Environmental Recorder II
BIo-Optical Multi-frequency Acoustical and Physical Environmental Recorder II
PI Supplied Instrument Name: BIo-Optical Multi-frequency Acoustical and Physical Environmental Recorder II Instrument Name: BIo-Optical Multi-frequency Acoustical and Physical Environmental Recorder II Instrument Short Name:BIOMAPERII Instrument Description: BIOMAPER II is a set of sensors on a long aluminum frame that resembles the tail of a World War II airplane. A research vessel tows the instrument through the water on a specialized tow cable that sends power to the sensors and brings data back to the ship. People use BIOMAPER II to learn about phytoplankton and zooplankton over areas that are too large to study with the traditional net-and-microscope method. Whereas nets can sample areas up to about 5 meters (16 feet) on a side, BIOMAPER II can record data from 500 meters (1,640 feet) or more of the water column at a time. The instrument's standard suite of sensors were chosen for studying plankton: a five-frequency sonar system, a video plankton recorder and an environmental sensor system (ESS, like the one on MOCNESS). The ESS measures water temperature, salinity, oxygen, chlorophyll and light levels. BIOMAPER II also has room for attaching other instruments for specific uses. The instrument's official name is BIOMAPER-II: the BIo-Optical Multi-frequency Acoustical and Physical Environmental Recorder. The Roman numeral II indicates that it's a redesign of the original BIOMAPER, a prototype that was invented and tested in the mid 1990s. (more information). Community Standard Description: http://vocab.nerc.ac.uk/collection/L22/current/NETT0007/
Video Plankton Recorder
Video Plankton Recorder
PI Supplied Instrument Name: Video Plankton Recorder Instrument Name: Video Plankton Recorder Instrument Short Name:VPR Instrument Description: The Video Plankton Recorder (VPR) is a video-microscope system used for imaging plankton and other particulate matter in the size range from a few micrometers to several centimeters. The VPR is essentially an underwater microscope. It consists of four video cameras (with magnifying optics) synchronized at 60 fields per second (fps) to a red-filtered 80 W xenon strobe (pulse duration = 1 microsecond). The current lens on each camera can be adjusted to provide a field of view between 5 mm and 10 cm. Use of higher magnification lenses is currently being explored for viewing protozoans (less than 1 micrometer resolution). The four cameras are set for concentric viewing fields so that a range of up to four magnifications can be viewed simultaneously, allowing a wide size range of plankton to be sampled. Depth of field is adjusted by the lens aperture setting, and the volume sampled in each video field ranges from about 1 ml to 1 liter, depending on lens settings. The cameras have been configured for stereoscopic viewing as well.A strobe on the other arm illuminates the imaged volume and flashes 60 times per second, producing 60 images per second of the particles and plankton in the water. The images are then saved internally on a computer hard disk and later plotted.
Deployment: Most commonly, the VPR is mounted in a frame and lowered into the water from the stern of the ship. Sometimes, a CTD also is mounted next to the VPR to collect depth, temperature, and salinity information at the same time as each video image. The instrument is lowered down through the water to a maximum depth of 350 meters to generate a profile of plankton/particle abundance and taxon group along with temperature and salinity. In addition to the towed configuration for mapping plankton distributions, it is possible to deploy the VPR in a fixed position (on a mooring) for viewing plankton swimming behaviors in two or three dimensions. The VPR instrument system has been used in both configurations, and deployment on ROVs has been proposed.
This definition was taken from the WHOI Ocean Instruments Web site and from a US GLOBEC Newsletter.
Cruise: NBP0103
NBP0103
Community Standard Description
International Council for the Exploration of the Sea
RVIB Nathaniel B. Palmer
vessel
NBP0103
Peter H. Wiebe
Woods Hole Oceanographic Institution
http://globec.whoi.edu/so-dir/reports/nbp0103/nbp0103.html
Report describing NBP0103
Cruise: NBP0104
NBP0104
Community Standard Description
International Council for the Exploration of the Sea
RVIB Nathaniel B. Palmer
vessel
NBP0104
Peter H. Wiebe
Woods Hole Oceanographic Institution
http://www.ccpo.odu.edu/Research/globec/cruises01/nbp0104_menu.html
Report describing NBP0104
Cruise: NBP0202
NBP0202
Community Standard Description
International Council for the Exploration of the Sea
RVIB Nathaniel B. Palmer
vessel
NBP0202
Peter H. Wiebe
Woods Hole Oceanographic Institution
http://globec.whoi.edu/so-dir/reports/nbp0202/nbp0202b.html
Report describing NBP0202
Community Standard Description
International Council for the Exploration of the Sea
RVIB Nathaniel B. Palmer
vessel