http://lod.bco-dmo.org/id/dataset/2891
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2010-06-16
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
Pre-Fertilization (PF) CTD profile measurements from R/V Kaiyo-Maru cruise KY0103-01 in the Northwestern Sub-Arctic Pacific in 2001 (SEEDS I project)
2008-09-16
publication
2008-09-16
revision
BCO-DMO Linked Data URI
2008-09-16
creation
http://lod.bco-dmo.org/id/dataset/2891
Atsushi Tsuda
University of Tokyo
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Tsuda, A. (2008) Pre-Fertilization (PF) CTD profile measurements from R/V Kaiyo-Maru cruise KY0103-01 in the Northwestern Sub-Arctic Pacific in 2001 (SEEDS I project). Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 16September2008) Version Date 2008-09-16 [if applicable, indicate subset used]. http://lod.bco-dmo.org/id/dataset/2891 [access date]
Pre Fertilization (PF) CTD profile data Dataset Description: <p><strong>SEEDS 2001 Pre Fertilization (PF) CTD profile data</strong></p> Methods and Sampling: <p><strong>PF Station Header</strong><br />
PF00.HDR:* System UpLoad Time = Jul 05 2001 07:08:41<br />
<br />
It is not explicitly stated but it appears that at all stations<br />
two CTD sampling rosette casts were made: clean and rms.<br />
<br />
The clean rosette appears to have typically sampled the mixed layer(&lt;50 m)<br />
e.g. 5, 10, 20, 30, 50 m.<br />
<br />
The rms rosette appears to have typically sampled the euphotic zone (&lt;200 m)<br />
e.g. 10, 20, 30, 40, 50, 80, 100, 150, 200 m.<br />
<br />
<br />
<strong>NOTE: Temp is ITS-90 scale</strong></p>
completed
Atsushi Tsuda
University of Tokyo
+81-3-5351-6342
Plankton Laboratory, Ocean Research Institute, University of Tokyo: 1-15-1 Minamidai, Nakano-ku
Tokyo
164-8693
Japan
tsuda@ori.u-tokyo.ac.jp
pointOfContact
asNeeded
Dataset Version: 16September2008
Unknown
lon
lat
date_start
Pr
Sal00
Sigma_t00
time_start
date_end
time_end
event
station
C0S_per_m
DepS
Flag
T090
CTD Seabird 19
theme
None, User defined
longitude
latitude
date
water pressure
salinity
sigma-t
time of day
event
station
conductivity
depth
No BCO-DMO term
water temperature at measurement depth
featureType
BCO-DMO Standard Parameters
CTD Sea-Bird SEACAT 19
instrument
BCO-DMO Standard Instruments
KY0103-01
service
Deployment Activity
Northwestern Sub-Arctic Pacific
place
Locations
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
Iron Synthesis
https://osprey.bco-dmo.org/program/2017
Iron Synthesis
The two main objectives of the Iron Synthesis program (SCOR Working Group proposal, 2005), are:
1. Data compilation: assembling a common open-access database of the in situ iron experiments, beginning with the first period (1993-2002; Ironex-1, Ironex-2, SOIREE, EisenEx, SEEDS-1; SOFeX, SERIES) where primary articles have already been published, to be followed by the 2004 experiments where primary articles are now in progress (EIFEX, SEEDS-2; SAGE, FeeP); similarly for the natural fertilizations S.O.JGOFS (1992), CROZEX (2004/2005) and KEOPS (2005).
2. Modeling and data synthesis of specific aspects of two or more such experiments for various topics such as physical mixing, phytoplankton productivity, overall ecosystem functioning, iron chemistry, CO2 budgeting, nutrient uptake ratios, DMS(P) processes, and combinations of these variables and processes.
SCOR Working Group proposal, 2005. "The Legacy of in situ Iron Enrichments: Data Compilation and Modeling".
http://www.scor-int.org/Working_Groups/wg131.htm
See also: SCOR Proceedings Vol. 42 Concepcion, Chile October 2006, pgs: 13-16 2.3.3 Working Group on The Legacy of in situ Iron Enrichments: Data Compilation and Modeling.
The first objective of the Iron Synthesis program involves a data recovery effort aimed at assembling a common, open-access database of data and metadata from a series of in-situ ocean iron fertilization experiments conducted between 1993 and 2005. Initially, funding for this effort is being provided by the Scientific Committee on Oceanic Research (SCOR) and the U.S. National Science Foundation (NSF).
Through the combined efforts of the principal investigators of the individual projects and the staff of Biological and Chemical Oceanography Data Management Office (BCO-DMO), data currently available primarily through individuals, disparate reports and data agencies, and in multiple formats, are being collected and prepared for addition to the BCO-DMO database from which they will be freely available to the community.
As data are contributed to the BCO-DMO office, they are organized into four overlapping categories:
1. Level 1, basic metadata
(e.g., description of project/study, general location, PI(s), participants);
2. Level 2, detailed metadata and basic shipboard data and routine ship's operations
(e.g., CTDs, underway measurements, sampling event logs);
3. Level 3, detailed metadata and data from specialized observations
(e.g., discrete observations, experimental results, rate measurements) and
4. Level 4, remaining datasets
(e.g., highest level of detailed data available from each study).
Collaboration with BCO-DMO staff began in March of 2008 and initial efforts have been directed toward basic project descriptions, levels 1 and 2 metadata and basic data, with detailed and more detailed data files being incorporated as they become available and are processed.
Related file
Program Documentation
The Iron Synthesis Program is funded jointly by the Scientific Committee on Oceanic Research (SCOR) and the U.S. National Science Foundation (NSF).
FeSynth
largerWorkCitation
program
Subarctic-Pacific Iron Experiment for Ecosystem Dynamics Study I
http://www.seeds-exp.jp/en/index.html
Subarctic-Pacific Iron Experiment for Ecosystem Dynamics Study I
<p>An in situ test of the iron limitation hypothesis in the subarctic North Pacific Oceanwas performed. First experiment of two (see SEEDS 2004)</p>
<p>A single enrichment of dissolved iron caused a large increase in phytoplanktonstanding stock and decreases in macronutrients and dissolved carbon dioxide. The dominant phytoplankton species shifted after the iron addition from pennate diatoms to a centric diatom, <i>Chaetoceros debilis</i>, that showed a very high growth rate, 2.6 doublings per day. Conclusion was that the bioavailability of iron regulates the magnitude of the phytoplankton biomass and the key phytoplankton species that determine the biogeochemical sensitivity to iron supply of high-nitrate, low-chlorophyll waters.</p>
<p>Data was collected at a total of 13 stations and from 3 moored sediment traps.<br />
- Stations were occupied IN patch for days 0, 2, 4, 7, 9, 11 and 13.<br />
- Stations were occupied OUT patch for days 2, 4, 7, 9, 11, 13.</p>
<p>It is not explicitly stated but it appears that at all stations two CTDsampling rosette casts were made: clean and rms. The clean rosette appears to have typically sampled the mixed layer (<50 m) e.g. 5, 10, 20, 30, 50 m. The rms rosette appears to have typically sampled the euphotic zone (<200m) e.g. 10, 20, 30, 40, 50, 80, 100, 150, 200 m.</p>
<p>Sediment traps were deployed at:<br />
- CENTRE: 20 m<br />
- IN: 40, 60, 100, 200 m<br />
- OUT: 20, 40, 60 and 100 m</p>
<p>Traps were recovered several times. Deployment times (days):<br />
- CENTRE: 3.95, 2.83, 2.02, 1.98, 1.93, 2.05<br />
- IN: 3.99, 2.84, 2.03, 2.00, 1.95, 2.01<br />
- OUT: 5.17, 3.97, 3.42</p>
<p><b>BCO-DMO/Doug Mackie Note:</b><br />
Throughout these data, stations are identified as D2-I, D2-O, etc.<br />
D2-I indicates "Day 2, in patch station".<br />
while D2-O indicates "Day 2, out patch station".<br />
This applies to all station identifiers.</p>
<h3>Related file</h3>
<p><a href="http://data.bco-dmo.org/Fe_Synthesis/SEEDS_2001/Project_SEEDS-ONE_Master.pdf">SEEDS 2001 Project Documentation</a></p>
<p> </p>
<p> </p>
SEEDS I
largerWorkCitation
project
eng; USA
oceans
Northwestern Sub-Arctic Pacific
2008-09-16
Western subarctic gyre in the North Pacific at 48.5°N, 165°E
0
BCO-DMO catalogue of parameters from Pre-Fertilization (PF) CTD profile measurements from R/V Kaiyo-Maru cruise KY0103-01 in the Northwestern Sub-Arctic Pacific in 2001 (SEEDS I project)
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/18003.rdf
Name: lon
Units: decimal degrees
Description: <p>longitude, negative denotes West</p>
http://lod.bco-dmo.org/id/dataset-parameter/18004.rdf
Name: lat
Units: decimal degrees
Description: <p>latitude, negative denotes South</p>
http://lod.bco-dmo.org/id/dataset-parameter/18005.rdf
Name: date_start
Units: YYYYMMDD
Description: <p>start date of sampling</p>
http://lod.bco-dmo.org/id/dataset-parameter/18006.rdf
Name: Pr
Units: decibars
Description: <p>pressure, from CTD</p>
http://lod.bco-dmo.org/id/dataset-parameter/18007.rdf
Name: Sal00
Units: dimensionless
Description: <p>salinity, from CTD, PSS-78 (PSU)</p>
http://lod.bco-dmo.org/id/dataset-parameter/18008.rdf
Name: Sigma_t00
Units: kilograms/meter^3
Description: <p>density sigma-t</p>
http://lod.bco-dmo.org/id/dataset-parameter/18009.rdf
Name: time_start
Units: HHMM
Description: <p>Start time of sampling</p>
http://lod.bco-dmo.org/id/dataset-parameter/18010.rdf
Name: date_end
Units: YYYYMMDD
Description: <p>End date of sampling</p>
http://lod.bco-dmo.org/id/dataset-parameter/18011.rdf
Name: time_end
Units: HHMM
Description: <p>End time of sampling</p>
http://lod.bco-dmo.org/id/dataset-parameter/18012.rdf
Name: event
Units: YYYYMMDDHHMM
Description: <p>Cruise event id</p>
http://lod.bco-dmo.org/id/dataset-parameter/18013.rdf
Name: station
Units: text
Description: <p>Station Id</p>
http://lod.bco-dmo.org/id/dataset-parameter/18014.rdf
Name: C0S_per_m
Units: S/m
Description: <p>Conductivity</p>
http://lod.bco-dmo.org/id/dataset-parameter/18015.rdf
Name: DepS
Units: meters
Description: <p>depth, salt water</p>
http://lod.bco-dmo.org/id/dataset-parameter/18016.rdf
Name: Flag
Units: (none)
Description: <p>Data flag - Use/Indication not noted</p>
http://lod.bco-dmo.org/id/dataset-parameter/18017.rdf
Name: T090
Units: degrees celsius
Description: <p>temperature, ITS-90</p>
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
34522
https://datadocs.bco-dmo.org/file/0AAMnZ0Tk4OMnJ/PF_CTD.csv
PF_CTD.csv
Primary data file for dataset ID 2891
download
https://osprey.bco-dmo.org/dataset/2891/data/download
download
onLine
dataset
<p><strong>PF Station Header</strong><br />
PF00.HDR:* System UpLoad Time = Jul 05 2001 07:08:41<br />
<br />
It is not explicitly stated but it appears that at all stations<br />
two CTD sampling rosette casts were made: clean and rms.<br />
<br />
The clean rosette appears to have typically sampled the mixed layer(&lt;50 m)<br />
e.g. 5, 10, 20, 30, 50 m.<br />
<br />
The rms rosette appears to have typically sampled the euphotic zone (&lt;200 m)<br />
e.g. 10, 20, 30, 40, 50, 80, 100, 150, 200 m.<br />
<br />
<br />
<strong>NOTE: Temp is ITS-90 scale</strong></p>
Specified by the Principal Investigator(s)
<p><strong>BCO-DMO Processing Notes</strong><br />
Generated from the original CTD data<br />
<br />
<strong>BCO-DMO Edits</strong><br />
- Cruise event generated as YYYYMMDDHHMM<br />
- Parameter names modified to conform to BCO-DMO convention<br />
- Date converted to YYYYMMDD<br />
- Time converted to HHMM<br />
- Lat/Lon converted from degs, decimal minutes to decimal degrees</p>
Specified by the Principal Investigator(s)
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
CTD Seabird 19
CTD Seabird 19
PI Supplied Instrument Name: CTD Seabird 19 PI Supplied Instrument Description:CTD header file for SEEDS 2001 PF CTD data:
* Sea-Bird SBE 19 Data File:
* FileName = CTD19pf00.HEX
* Software Version 4.233
* Temperature SN = 591
* Conductivity SN = 591
* System UpLoad Time = Jul 05 2001 07:08:41
** Ship:kaiyomaru
** Cruise:9605 2001N3
** Station:i08 PF
** Latitude:38-32.2 48-29.98N
** Longitude:135-00.0 164-59.67E
* ds
* SEACAT PROFILER V2.1 SN 591 07/05/01 16:25:44.181
* pressure sensor: serial no = 9B383, range = 3000 psia, tc = 0
* clk = 32767.922 iop = 136 vmain = 8.4 vlith = 5.3
* ncasts = 1 samples = 1949 free = 8598 lwait = 0 msec
* sample rate = 1 scan every 0.5 seconds
* minimum raw conductivity frequency for pump turn on = 3203 hertz
* pump delay = 45 seconds
* battery cutoff = 5.8 volts
* number of voltages sampled = 0
* S>
* cast 0 07/05 16:03:22 samples 0 to 1948 stop = switch off
# nquan = 7
# nvalues = 296
# units = metric
# name 0 = depS: depth, salt water [m]
# name 1 = pr: pressure [db]
# name 2 = t090: temperature, ITS-90 [deg C]
# name 3 = c0S/m: conductivity [S/m]
# name 4 = sal00: salinity, PSS-78 [PSU]
# name 5 = sigma-t00: density, sigma-t [kg/m^3]
# name 6 = flag: 0.000e+00
# span 0 = 1.000, 296.000
# span 1 = 1.036, 298.687
# span 2 = 1.2100, 5.6701
# span 3 = 2.875072, 3.264853
# span 4 = 31.7617, 34.0901
# span 5 = 25.2717, 27.1038
# span 6 = 0.000e+00, 0.000e+00
# interval = meters: 1
# start_time = Jul 05 2001 16:03:22
# bad_flag = -9.990e-29
# sensor 0 = Frequency 0 temperature, 591, 02-Nov-00
# sensor 1 = Frequency 1 conductivity, 591, 02-Nov-00, cpcor = -9.5700e-08
# sensor 2 = Pressure Voltage, 9B383, 09-Nov-00
# datcnv_date = Jul 05 2001 07:12:58, 4.233
# datcnv_in = PF00.HEX 19-591.CON
# datcnv_skipover = 0
# filter_date = Jul 05 2001 07:13:03, 4.233
# filter_in = WORK0.CNV
# filter_low_pass_tc_A = 0.500
# filter_low_pass_tc_B = 0.000
# filter_low_pass_A_vars = depS
# filter_low_pass_B_vars =
# alignctd_date = Jul 05 2001 07:13:08, 4.233
# alignctd_in = WORK1.CNV
# alignctd_cond_advSecs = 0.000, 0.000
# alignctd_temp_advSecs = 0.500, 0.000
# alignctd_oxygen_current_advSecs = 0.000, 0.000
# alignctd_oxygen_temp_advSecs = 0.000, 0.000
# alignctd_wetstar_advSecs = 0.000
# binavg_date = Jul 05 2001 07:13:13, 4.233
# binavg_in = WORK2.CNV
# binavg_bintype = Depth Bins
# binavg_binsize = 1.00
# binavg_excl_bad_scans = yes
# binavg_downcast_only = yes
# binavg_skipover = 0
# binavg_surface_bin = no, min = 0.000, max = 0.000, value = 0.000
# derive_date = Jul 05 2001 07:13:17, 4.233
# derive_in = WORK3.CNV 19-591.CON
# file_type = binary
*END* Instrument Name: CTD Sea-Bird SEACAT 19 Instrument Short Name:CTD SBE 19 Instrument Description: The Sea-Bird SBE 19 SEACAT Recorder measures conductivity, temperature, and pressure (depth). The SEACAT is self-powered and self-contained and can be deployed in profiling or moored mode. The SBE 19 SEACAT was replaced in 2001 by the 19plus. more information from Sea-Bird Electronics Community Standard Description: http://vocab.nerc.ac.uk/collection/L22/current/TOOL0042/
Cruise: KY0103-01
KY0103-01
Community Standard Description
International Council for the Exploration of the Sea
R/V Kaiyo-Maru
vessel
KY0103-01
Atsushi Tsuda
Ocean Research Institute - University of Tokyo
Community Standard Description
International Council for the Exploration of the Sea
R/V Kaiyo-Maru
vessel