http://lod.bco-dmo.org/id/dataset/2930
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2009-03-12
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
Nano- and microplankton biomass, epifluorescence microscopy from R/V Melville, R/V Roger Revelle cruises COOK19MV, DRFT08RR from the Southern Ocean, south of New Zealand in 2002 (SOFeX project)
2007-03-28
publication
2007-03-28
revision
BCO-DMO Linked Data URI
2007-03-28
creation
http://lod.bco-dmo.org/id/dataset/2930
Michael R. Landry
University of Hawaiʻi at Mānoa
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Landry, M. R. (2007) Nano- and microplankton biomass, epifluorescence microscopy from R/V Melville, R/V Roger Revelle cruises COOK19MV, DRFT08RR from the Southern Ocean, south of New Zealand in 2002 (SOFeX project). Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version final) Version Date 2007-03-28 [if applicable, indicate subset used]. http://lod.bco-dmo.org/id/dataset/2930 [access date]
nano- and microplankton biomass, epifluorescence microscopy Dataset Description: <p>nano- and microplankton biomass estimated by epifluorescence microscopy from bottle samples</p> Methods and Sampling: <pre>
<strong>dates:</strong> 11 January 2002 to 08 February 2002 (20020111-20020208)
<strong>location:</strong> N: -54.09 S: -66.42 W: -172.02 E: -169.35
<strong>project/cruise:</strong> SOFeX/RR
<strong>platform:</strong> R/V Roger Revelle
Methodology: image-enhanced epifluorescent microscopy methods described in:
Brown, S.L., M.R. Landry, J. Neveux, and C. Dupouy. 2003. Microbial community
abundance and biomass along a 180° transect in the equatorial Pacific during
an El Niño-Southern Oscillation cold phase. Journal of Geophysical Research,
108(C12), 8139. (available from AGU.org <a href="http://www.agu.org/pubs/crossref/2003/2001JC000817.shtml">abstract and PDF link</a>)
</pre>
completed
Michael R. Landry
University of Hawaiʻi at Mānoa
858-534-4702
9500 Gilman Drive Mail Code: 0227
La Jolla
CA
92093-0227
USA
mlandry@ucsd.edu
pointOfContact
asNeeded
Dataset Version: final
Unknown
event
date
time
time_L
lon
lat
station
ev_type
patch_loc
depth
flag_het_C
ciliates_C
diatoms_lt20_C
diatoms_gt20_C
phyto_tot_C
Niskin Bottle
theme
None, User defined
event
date
time of day
No BCO-DMO term
longitude
latitude
station
depth
ciliate Carbon biomass
featureType
BCO-DMO Standard Parameters
Niskin bottle
instrument
BCO-DMO Standard Instruments
COOK19MV
DRFT08RR
service
Deployment Activity
Southern Ocean
Southern Ocean, south of New Zealand
place
Locations
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
Ocean Carbon and Biogeochemistry
http://us-ocb.org/
Ocean Carbon and Biogeochemistry
The Ocean Carbon and Biogeochemistry (OCB) program focuses on the ocean's role as a component of the global Earth system, bringing together research in geochemistry, ocean physics, and ecology that inform on and advance our understanding of ocean biogeochemistry. The overall program goals are to promote, plan, and coordinate collaborative, multidisciplinary research opportunities within the U.S. research community and with international partners. Important OCB-related activities currently include: the Ocean Carbon and Climate Change (OCCC) and the North American Carbon Program (NACP); U.S. contributions to IMBER, SOLAS, CARBOOCEAN; and numerous U.S. single-investigator and medium-size research projects funded by U.S. federal agencies including NASA, NOAA, and NSF.
The scientific mission of OCB is to study the evolving role of the ocean in the global carbon cycle, in the face of environmental variability and change through studies of marine biogeochemical cycles and associated ecosystems.
The overarching OCB science themes include improved understanding and prediction of: 1) oceanic uptake and release of atmospheric CO2 and other greenhouse gases and 2) environmental sensitivities of biogeochemical cycles, marine ecosystems, and interactions between the two.
The OCB Research Priorities (updated January 2012) include: ocean acidification; terrestrial/coastal carbon fluxes and exchanges; climate sensitivities of and change in ecosystem structure and associated impacts on biogeochemical cycles; mesopelagic ecological and biogeochemical interactions; benthic-pelagic feedbacks on biogeochemical cycles; ocean carbon uptake and storage; and expanding low-oxygen conditions in the coastal and open oceans.
OCB
largerWorkCitation
program
Iron Synthesis
https://osprey.bco-dmo.org/program/2017
Iron Synthesis
The two main objectives of the Iron Synthesis program (SCOR Working Group proposal, 2005), are:
1. Data compilation: assembling a common open-access database of the in situ iron experiments, beginning with the first period (1993-2002; Ironex-1, Ironex-2, SOIREE, EisenEx, SEEDS-1; SOFeX, SERIES) where primary articles have already been published, to be followed by the 2004 experiments where primary articles are now in progress (EIFEX, SEEDS-2; SAGE, FeeP); similarly for the natural fertilizations S.O.JGOFS (1992), CROZEX (2004/2005) and KEOPS (2005).
2. Modeling and data synthesis of specific aspects of two or more such experiments for various topics such as physical mixing, phytoplankton productivity, overall ecosystem functioning, iron chemistry, CO2 budgeting, nutrient uptake ratios, DMS(P) processes, and combinations of these variables and processes.
SCOR Working Group proposal, 2005. "The Legacy of in situ Iron Enrichments: Data Compilation and Modeling".
http://www.scor-int.org/Working_Groups/wg131.htm
See also: SCOR Proceedings Vol. 42 Concepcion, Chile October 2006, pgs: 13-16 2.3.3 Working Group on The Legacy of in situ Iron Enrichments: Data Compilation and Modeling.
The first objective of the Iron Synthesis program involves a data recovery effort aimed at assembling a common, open-access database of data and metadata from a series of in-situ ocean iron fertilization experiments conducted between 1993 and 2005. Initially, funding for this effort is being provided by the Scientific Committee on Oceanic Research (SCOR) and the U.S. National Science Foundation (NSF).
Through the combined efforts of the principal investigators of the individual projects and the staff of Biological and Chemical Oceanography Data Management Office (BCO-DMO), data currently available primarily through individuals, disparate reports and data agencies, and in multiple formats, are being collected and prepared for addition to the BCO-DMO database from which they will be freely available to the community.
As data are contributed to the BCO-DMO office, they are organized into four overlapping categories:
1. Level 1, basic metadata
(e.g., description of project/study, general location, PI(s), participants);
2. Level 2, detailed metadata and basic shipboard data and routine ship's operations
(e.g., CTDs, underway measurements, sampling event logs);
3. Level 3, detailed metadata and data from specialized observations
(e.g., discrete observations, experimental results, rate measurements) and
4. Level 4, remaining datasets
(e.g., highest level of detailed data available from each study).
Collaboration with BCO-DMO staff began in March of 2008 and initial efforts have been directed toward basic project descriptions, levels 1 and 2 metadata and basic data, with detailed and more detailed data files being incorporated as they become available and are processed.
Related file
Program Documentation
The Iron Synthesis Program is funded jointly by the Scientific Committee on Oceanic Research (SCOR) and the U.S. National Science Foundation (NSF).
FeSynth
largerWorkCitation
program
Southern Ocean Iron Experiment
http://www.mbari.org/expeditions/SOFeX2002/
Southern Ocean Iron Experiment
<p>Before he passed away in 1993, John Martin suggested that an increase in the flow of iron-rich dust to the ocean causes phytoplankton (single celled algae) to grow. The increased photosynthesis removes carbon dioxide from surface waters as the algae create biomass. This carbon dioxide is replaced by carbon dioxide gas that flows into the sea from the atmosphere. Reduced carbon dioxide in the atmosphere cools the planet (CO2 is a greenhouse gas that warms the earth). The results of this work, funded by the National Science Foundation, the Department of Energy, and the US Coast Guard, will be a much better understanding of how biological processes may regulate climate. (see Related Info: Fe cycle)</p>
<p>A direct test of the 'Martin Hypothesis' that trace concentrations of Fe are responsible for phytoplankton's ability to grow by direct experimental addition of Fe to the surface waters. Consequently the distribution of bioavailable Fe in the surface waters determines large geographical areas primary production and the following flux of fixed organic matter to the deep sea. The aim of the SOFeX project is to investigate the effects of iron fertilization on the productivity of the Southern Ocean. The results of this work will contribute significantly to our understanding of important biogeochemical processes which bear directly on the global carbon cycle, atmospheric carbon dioxide concentration, and climate control.</p>
<p>The SOFeX-N and SOFeX-S designations are sometimes used to distinguish between two iron enriched patches - one in low silicate waters north of the polar front (SOFEX-N), and the other in high silicate waters south of the polar front (SOFEX-S). All three ships, Melville (MV), Revelle (RR) and Polar Star (PS), worked in SOFEX-S, but only the Revelle and Melville worked in the SOFeX N patch and shuttled between the two patches.</p>
SOFeX
largerWorkCitation
project
eng; USA
oceans
Southern Ocean; Southern Ocean, south of New Zealand
2007-03-28
Southern Ocean, south of New Zealand
0
BCO-DMO catalogue of parameters from Nano- and microplankton biomass, epifluorescence microscopy from R/V Melville, R/V Roger Revelle cruises COOK19MV, DRFT08RR from the Southern Ocean, south of New Zealand in 2002 (SOFeX project)
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/15339.rdf
Name: event
Units: doYhhmm
Description: <p>unique sampling event number from event log (day of year and time (UTC))</p>
http://lod.bco-dmo.org/id/dataset-parameter/15340.rdf
Name: date
Units: YYYYMMDD
Description: <p>date sampling began (UTC)</p>
http://lod.bco-dmo.org/id/dataset-parameter/15341.rdf
Name: time
Units: hhmm
Description: <p>time sampling began (UTC)</p>
http://lod.bco-dmo.org/id/dataset-parameter/15342.rdf
Name: time_L
Units: hhmm
Description: <p>time sampling began (local; GMT +13)</p>
http://lod.bco-dmo.org/id/dataset-parameter/15343.rdf
Name: lon
Units: decimal degrees
Description: <p>longitude, negative denotes West</p>
http://lod.bco-dmo.org/id/dataset-parameter/15344.rdf
Name: lat
Units: decimal degrees
Description: <p>latitude, negative denotes South</p>
http://lod.bco-dmo.org/id/dataset-parameter/15345.rdf
Name: station
Units: dimensionless
Description: <p>station identifier</p>
http://lod.bco-dmo.org/id/dataset-parameter/15346.rdf
Name: ev_type
Units: dimensionless
Description: <p>event type descriptor string</p>
http://lod.bco-dmo.org/id/dataset-parameter/15347.rdf
Name: patch_loc
Units: dimensionless
Description: <p>denotes in or out and which patch</p>
http://lod.bco-dmo.org/id/dataset-parameter/15348.rdf
Name: depth
Units: meters
Description: <p>depth, calculated from pressure</p>
http://lod.bco-dmo.org/id/dataset-parameter/15349.rdf
Name: flag_het_C
Units: micrograms of carbon per liter
Description: <p>biomass attributed to flagellated grazers heterotrophic flagellates (2-200 microns)</p>
http://lod.bco-dmo.org/id/dataset-parameter/15350.rdf
Name: ciliates_C
Units: micrograms of carbon per liter
Description: <p>biomass attributed to ciliates</p>
http://lod.bco-dmo.org/id/dataset-parameter/15351.rdf
Name: diatoms_lt20_C
Units: micrograms of carbon per liter
Description: <p>biomass attributed to diatoms less than 20 microns in length</p>
http://lod.bco-dmo.org/id/dataset-parameter/15352.rdf
Name: diatoms_gt20_C
Units: micrograms of carbon per liter
Description: <p>biomass attributed to diatoms greater than 20 microns in length</p>
http://lod.bco-dmo.org/id/dataset-parameter/15353.rdf
Name: phyto_tot_C
Units: micrograms of carbon per liter
Description: <p>total biomass attributed to phytoplankton</p>
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2649
https://datadocs.bco-dmo.org/file/OJDO13MspkxBKo/nano_micro_COOK19MV.csv
nano_micro_COOK19MV.csv
version 02 February 2007
PI: Michael Landry
SOFeX cruise: R/V Melville
nano- and microplankton biomass estimated by epifluorescence microscopy
download
2455
https://datadocs.bco-dmo.org/file/k6LyJq8uqQJKk0/nano_micro_DRFT08RR.csv
nano_micro_DRFT08RR.csv
version 28 March 2007
PI: Michael Landry
SOFeX cruise: R/V Revelle
nano- and microplankton biomass estimated by epifluorescence microscopy
download
https://osprey.bco-dmo.org/dataset/2930/data/download
download
onLine
dataset
<pre>
<strong>dates:</strong> 11 January 2002 to 08 February 2002 (20020111-20020208)
<strong>location:</strong> N: -54.09 S: -66.42 W: -172.02 E: -169.35
<strong>project/cruise:</strong> SOFeX/RR
<strong>platform:</strong> R/V Roger Revelle
Methodology: image-enhanced epifluorescent microscopy methods described in:
Brown, S.L., M.R. Landry, J. Neveux, and C. Dupouy. 2003. Microbial community
abundance and biomass along a 180° transect in the equatorial Pacific during
an El Niño-Southern Oscillation cold phase. Journal of Geophysical Research,
108(C12), 8139. (available from AGU.org <a href="http://www.agu.org/pubs/crossref/2003/2001JC000817.shtml">abstract and PDF link</a>)
</pre>
from Cruise: COOK19MV <pre>
<b>dates:</b> 24 January 2002 to 14 February 2002 (20020124-20020214)
<b>location:</b> N: -55.256 S: -66.612 W: -172.228 E: -170.999
<b>project/cruise:</b> SOFeX/MV
Methodology: image-enhanced epifluorescent microscopy methods described in:
Brown, S.L., M.R. Landry, J. Neveux, and C. Dupouy. 2003. Microbial community
abundance and biomass along a 180° transect in the equatorial Pacific during
an El Niño-Southern Oscillation cold phase. Journal of Geophysical Research,
108(C12), 8139. (available from AGU.org <a
href="http://www.agu.org/pubs/crossref/2003/2001JC000817.shtml">abstract and PDF link</a>)
</pre>
from Cruise: DRFT08RR <pre>
<b>dates:</b> 11 January 2002 to 08 February 2002 (20020111-20020208)
<b>location:</b> N: -54.09 S: -66.42 W: -172.02 E: -169.35
<b>project/cruise:</b> SOFeX/RR
<b>platform:</b> R/V Roger Revelle
Methodology: image-enhanced epifluorescent microscopy methods described in:
Brown, S.L., M.R. Landry, J. Neveux, and C. Dupouy. 2003. Microbial community
abundance and biomass along a 180° transect in the equatorial Pacific during
an El Niño-Southern Oscillation cold phase. Journal of Geophysical Research,
108(C12), 8139. (available from AGU.org <a
href="http://www.agu.org/pubs/crossref/2003/2001JC000817.shtml">abstract and PDF link</a>)
</pre>
Specified by the Principal Investigator(s)
<pre>
Change history: YYMMDD
061215: original data received from Susan Brown (UH Manoa);
070129: added to OCB database by Cyndy Chandler, OCB DMO, (cchandler@whoi.edu)
070328: update metadata from new version of cruise event log
070503: data is now considered final following PI review
OCB DMO Note: event, date, time, lon, lat and ev_type taken from event logs
PI note:
all biomass reported in micrograms of Carbon per liter
</pre>
from Cruise: COOK19MV <pre>
Change history: YYMMDD
061215: original data received from Susan Brown (UH Manoa);
070129: added to OCB database by Cyndy Chandler, OCB DMO, (cchandler@whoi.edu)
070503: data is now considered final following PI review
OCB DMO Note:
070129: event, date, time, lon, lat and ev_type taken from event logs
PI note:
all biomass reported in micrograms of Carbon per liter
</pre>
from Cruise: DRFT08RR <pre>
Change history: YYMMDD
061215: original data received from Susan Brown (UH Manoa);
070129: added to OCB database by Cyndy Chandler, OCB DMO, (cchandler@whoi.edu)
070328: update metadata from new version of cruise event log
070503: data is now considered final following PI review
OCB DMO Note: event, date, time, lon, lat and ev_type taken from event logs
PI note:
all biomass reported in micrograms of Carbon per liter
</pre>
Specified by the Principal Investigator(s)
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
Niskin Bottle
Niskin Bottle
PI Supplied Instrument Name: Niskin Bottle Instrument Name: Niskin bottle Instrument Short Name:Niskin bottle Instrument Description: A Niskin bottle (a next generation water sampler based on the Nansen bottle) is a cylindrical, non-metallic water collection device with stoppers at both ends. The bottles can be attached individually on a hydrowire or deployed in 12, 24, or 36 bottle Rosette systems mounted on a frame and combined with a CTD. Niskin bottles are used to collect discrete water samples for a range of measurements including pigments, nutrients, plankton, etc. Community Standard Description: http://vocab.nerc.ac.uk/collection/L22/current/TOOL0412/
Cruise: COOK19MV
COOK19MV
R/V Melville
Community Standard Description
International Council for the Exploration of the Sea
R/V Melville
vessel
COOK19MV
Kenneth H. Coale
Moss Landing Marine Laboratories
http://ocb.whoi.edu/SOFeX/CRUISES/proj_description.pdf
Report describing COOK19MV
Cruise: DRFT08RR
DRFT08RR
R/V Roger Revelle
Community Standard Description
International Council for the Exploration of the Sea
R/V Roger Revelle
vessel
DRFT08RR
Kenneth S. Johnson
Monterey Bay Aquarium Research Institute
http://ocb.whoi.edu/SOFeX/CRUISES/proj_description.pdf
Report describing DRFT08RR
R/V Melville
Community Standard Description
International Council for the Exploration of the Sea
R/V Melville
vessel
R/V Roger Revelle
Community Standard Description
International Council for the Exploration of the Sea
R/V Roger Revelle
vessel