http://lod.bco-dmo.org/id/dataset/3272
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2009-11-20
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
qPCR FCM from R/V Kilo Moana KM0715 in the North Pacific Subtropical Gyre north of Hawaii, near (24 N, 159.0 W) from August 2007 (C-MORE project)
2009-09-30
publication
2009-09-30
revision
BCO-DMO Linked Data URI
2009-09-30
creation
http://lod.bco-dmo.org/id/dataset/3272
Jonathan P. Zehr
University of California-Santa Cruz
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Zehr, J. P. (2009) qPCR FCM from R/V Kilo Moana KM0715 in the North Pacific Subtropical Gyre north of Hawaii, near (24 N, 159.0 W) from August 2007 (C-MORE project). Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version (See Platform Deployments)) Version Date 2009-09-30 [if applicable, indicate subset used]. http://lod.bco-dmo.org/id/dataset/3272 [access date]
qPCR FCM Dataset Description: <p>C-MORE qPCR FCM<br />
qPCR and FCM results<br />
&nbsp;</p> Methods and Sampling: <p>See Platform Deployments for cruise specific documentation</p>
Funding provided by NSF Division of Biological Infrastructure (NSF DBI) Award Number: DBI-0424599 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=0424599
onGoing
Jonathan P. Zehr
University of California-Santa Cruz
831-459 4009
E&MS A438, Ocean Sciences Department 1156 High Street
Santa Cruz
CA
95064
USA
zehrj@ucsc.edu
pointOfContact
asNeeded
Dataset Version: (See Platform Deployments)
Unknown
sta
date
cast
lat
lon
depth
nifH_grpB_10um
nifH_grpB_0point2um
nifH_grpB_wc_qPCR
Croco_like_FCM
Syn_like_FCM
narB_HT_grpA_0point2um_qPCR
narB_HT_grpB_0point2um_qPCR
rhizo_richleia_10um_qPCR
hemiaulus_richleia_10um_qPCR
chaetoceros_calothrix_10um_qPCR
tricho_10um_qPCR
theme
None, User defined
station number
date
cast
latitude
longitude
depth
No BCO-DMO term
featureType
BCO-DMO Standard Parameters
KM0715
service
Deployment Activity
North Pacific Subtropical Gyre north of Hawaii, near (24 N, 159.0 W)
place
Locations
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
Center for Microbial Oceanography: Research and Education
http://cmore.soest.hawaii.edu/
Center for Microbial Oceanography: Research and Education
<h3>Project summary</h3>
<p>The <strong>Center for Microbial Oceanography: Research and Education</strong> (C-MORE) is a recently established (August 2006; NSF award: EF-0424599) NSF-sponsored Science and Technology Center designed to facilitate a more comprehensive understanding of the diverse assemblages of microorganisms in the sea, ranging from the genetic basis of marine microbial biogeochemistry including the metabolic regulation and environmental controls of gene expression, to the processes that underpin the fluxes of carbon, related bioelements and energy in the marine environment. Stated holistically, C-MORE's primary mission is: <em>Linking Genomes to Biomes</em>.</p>
<p>We believe that the time is right to address several major, long-standing questions in microbial oceanography. Recent advances in the application of molecular techniques have provided an unprecedented view of the structure, diversity and possible function of sea microbes. By combining these and other novel approaches with more well-established techniques in microbiology, oceanography and ecology, it may be possible to develop a meaningful predictive understanding of the ocean with respect to energy transduction, carbon sequestration, bioelement cycling and the probable response of marine ecosystems to global environmental variability and climate change. The strength of C-MORE resides in the synergy created by bringing together experts who traditionally have not worked together and this, in turn, will facilitate the creation and dissemination of new knowledge on the role of marine microbes in global habitability.</p>
<p>The new Center will design and conduct novel research, broker partnerships, increase diversity of human resources, implement education and outreach programs, and utilize comprehensive information about microbial life in the sea. The Center will bring together teams of scientists, educators and community members who otherwise do not have an opportunity to communicate, collaborate or design creative solutions to long-term ecosystem scale problems. The Center's research will be organized around four interconnected themes:</p>
<ul>
<li>(Theme I) microbial biodiversity,</li>
<li>(Theme II) metabolism and C-N-P-energy flow,</li>
<li>(Theme III) remote and continuous sensing and links to climate variability, and</li>
<li>(Theme IV) ecosystem modeling, simulation and prediction.</li>
</ul>
<p> Each theme will have a leader to help coordinate the research programs and to facilitate interactions among the other related themes. The education programs will focus on pre-college curriculum enhancements, in service teacher training and formal undergraduate/graduate and post-doctoral programs to prepare the next generation of microbial oceanographers. The Center will establish and maintain creative outreach programs to help diffuse the new knowledge gained into society at large including policymakers. The Center's activities will be dispersed among five partner institutions:</p>
<ul>
<li>Massachusetts Institute of Technology,</li>
<li>Woods Hole Oceanographic Institution,</li>
<li>Monterey Bay Aquarium Research Institute,</li>
<li>University of California at Santa Cruz and</li>
<li>Oregon State University</li>
</ul>
<p>and will be coordinated at the University of Hawaii at Manoa.</p>
<h4>Related Files:</h4>
<p><a href="http://bcodata.whoi.edu/C-MORE/C-MORE_SIP_ver_09-01-2008.pdf">Strategic plan (PDF file)</a></p>
C-MORE
largerWorkCitation
project
eng; USA
oceans
North Pacific Subtropical Gyre north of Hawaii, near (24 N, 159.0 W)
2009-09-30
North Pacific Subtropical Gyre (large region around 22 45 N, 158 W)
0
BCO-DMO catalogue of parameters from qPCR FCM from R/V Kilo Moana KM0715 in the North Pacific Subtropical Gyre north of Hawaii, near (24 N, 159.0 W) from August 2007 (C-MORE project)
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/20318.rdf
Name: sta
Units: dimensionless
Description: <p>station number</p>
http://lod.bco-dmo.org/id/dataset-parameter/20319.rdf
Name: date
Units: YYYYMMDD GMT
Description: <p>date</p>
http://lod.bco-dmo.org/id/dataset-parameter/20320.rdf
Name: cast
Units: dimensionless
Description: <p>cast number</p>
http://lod.bco-dmo.org/id/dataset-parameter/20321.rdf
Name: lat
Units: decimal degrees (West is negative)
Description: <p>latitude</p>
http://lod.bco-dmo.org/id/dataset-parameter/20322.rdf
Name: lon
Units: decimal degrees (South is negative)
Description: <p>longitude</p>
http://lod.bco-dmo.org/id/dataset-parameter/20323.rdf
Name: depth
Units: meters
Description: <p>depth</p>
http://lod.bco-dmo.org/id/dataset-parameter/20324.rdf
Name: nifH_grpB_10um
Units: cells/L
Description: <p>nifH_grpB_10um</p>
http://lod.bco-dmo.org/id/dataset-parameter/20325.rdf
Name: nifH_grpB_0point2um
Units: cells/L
Description: <p>nifH_grpB_0.2um</p>
http://lod.bco-dmo.org/id/dataset-parameter/20326.rdf
Name: nifH_grpB_wc_qPCR
Units: cells/L
Description: <p>nifH_grpB_wc_qPCR</p>
http://lod.bco-dmo.org/id/dataset-parameter/20327.rdf
Name: Croco_like_FCM
Units: cells/L
Description: <p>Croco-like_FCM</p>
http://lod.bco-dmo.org/id/dataset-parameter/20328.rdf
Name: Syn_like_FCM
Units: cells/L
Description: <p>Syn-like_FCM</p>
http://lod.bco-dmo.org/id/dataset-parameter/20329.rdf
Name: narB_HT_grpA_0point2um_qPCR
Units: cells/L
Description: <p>narB_HT_grpA_0.2um_qPCR</p>
http://lod.bco-dmo.org/id/dataset-parameter/20330.rdf
Name: narB_HT_grpB_0point2um_qPCR
Units: cells/L
Description: <p>narB_HT_grpB_0.2um_qPCR</p>
http://lod.bco-dmo.org/id/dataset-parameter/20331.rdf
Name: rhizo_richleia_10um_qPCR
Units: cells/L
Description: <p>rhizo_richleia_10um_qPCR</p>
http://lod.bco-dmo.org/id/dataset-parameter/20332.rdf
Name: hemiaulus_richleia_10um_qPCR
Units: cells/L
Description: <p>hemiaulus_richleia_10um_qPCR</p>
http://lod.bco-dmo.org/id/dataset-parameter/20333.rdf
Name: chaetoceros_calothrix_10um_qPCR
Units: cells/L
Description: <p>chaetoceros_calothrix_10um_qPCR</p>
http://lod.bco-dmo.org/id/dataset-parameter/20334.rdf
Name: tricho_10um_qPCR
Units: cells/L
Description: <p>tricho_10um_qPCR</p>
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
7642
https://datadocs.bco-dmo.org/file/jAKxGpxu3y07Br/qPCR_FCM_KM0715.csv
qPCR_FCM_KM0715.csv
qPCR and FCM results
CMORE/BLOOMER
Zehr Lab, UCSC
Jonathan P. Zehr
2009
original file: Zehr_CMORE_2007_cruise_data_zehrlab_3_25_08.xls
date ingested into BCO-DMO: September 30, 2009
download
https://osprey.bco-dmo.org/dataset/3272/data/download
download
onLine
dataset
<p>See Platform Deployments for cruise specific documentation</p>
from Cruise: KM0715 <p>(tbd)</p>
Specified by the Principal Investigator(s)
<p>See Platform Deployments for cruise specific documentation</p>
from Cruise: KM0715 <p>(tbd)</p>
Specified by the Principal Investigator(s)
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
Cruise: KM0715
KM0715
R/V Kilo Moana
Community Standard Description
International Council for the Exploration of the Sea
R/V Kilo Moana
vessel
KM0715
Ricardo Letelier
Oregon State University
ftp://ftp.soest.hawaii.edu/dkarl/cmore/Cruise_Reports/bloomer1//Letelier_cmore_2_rpt.pdf
Report describing KM0715
R/V Kilo Moana
Community Standard Description
International Council for the Exploration of the Sea
R/V Kilo Moana
vessel