http://lod.bco-dmo.org/id/dataset/3565
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2011-10-19
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
Scientific sampling event log from ARSV Laurence M. Gould LMG1110 in the Southern Ocean from Nov. 2011 (Salp_Antarctic project)
2011-12-28
publication
2011-12-28
revision
Marine Biological Laboratory/Woods Hole Oceanographic Institution Library (MBLWHOI DLA)
2016-10-10
publication
https://doi.org/10.1575/1912/bco-dmo.661345
Ann Bucklin
University of Connecticut
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Bucklin, A. (2011) Scientific sampling event log from ARSV Laurence M. Gould LMG1110 in the Southern Ocean from Nov. 2011 (Salp_Antarctic project). Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version final) Version Date 2011-12-28 [if applicable, indicate subset used]. doi:10.1575/1912/bco-dmo.661345 [access date]
scientific sampling event log Dataset Description: <p>A digital event log to record all instrument deployments during the cruise.</p> Methods and Sampling:
Funding provided by NSF Antarctic Sciences (NSF ANT) Award Number: ANT-1044982 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1044982
completed
Ann Bucklin
University of Connecticut
860-405-9208
Avery Point Campus 1080 Shennecossett Rd.
Groton
CT
06340
USA
ann.bucklin@uconn.edu
pointOfContact
asNeeded
Dataset Version: final
Unknown
event
time_local
time_utc
lat
lon
inst
se_flag
station
cast
depth_w
comments
si
day_local
month_local
day_utc
depth
month_utc
station_std
date_utc
theme
None, User defined
event
time_local
time_utc
latitude
longitude
instrument
se_flag
station
cast
depth_bottom
comments
investigator
day_local
month_local
day_gmt
depth
month_utc
station_std
date_utc
featureType
BCO-DMO Standard Parameters
LMG1110
service
Deployment Activity
Southern Ocean
place
Locations
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
Population ecology of Salpa thompsoni based on molecular indicators
https://osprey.bco-dmo.org/project/2174
Population ecology of Salpa thompsoni based on molecular indicators
<p>The Antarctic salp, <em>Salpa thompsoni</em>, is an increasingly important player in the vulnerable Antarctic Peninsula pelagic ecosystem. Observations of high abundance of Salpa thompsoni during the summer in the Southern Ocean suggest that this species is capable of rapid somatic and population growth, and frequently forms dense blooms under favorable environmental conditions. The proposed research will examine genome-wide patterns of gene expression, target gene expression levels, and patterns of population genetic diversity and structure of the target salp species. Our preliminary results and data analysis have provided a promising basis for transcriptomic studies of <em>S. thompsoni</em> in the Southern Ocean. The proposed next steps in our genomic/transcriptomic analysis of <em>Salpa thompsoni</em> are: 1) completion of a reference transcriptome as a basis for genome-wide analysis of gene expression; 2) whole transcriptome shotgun sequencing (RNA-Seq) analysis to characterize gene expression in relation to individual characteristics and environmental conditions; 3) quantitative real-time PCR (qRT-PCR) characterization and validation of gene expression for 10-20 top differentially-expressed genes; and 4) detection of strand-specific allelic variation at SNP (Single Nucleotide Polymorphic) sites to analyze clonal diversity and population genetic diversity and structure. We hypothesize that: 1) deep analysis of the Salpa thompsoni transcriptome will reveal significant associations among selected set of differentially-expressed genes and critical life history stages and events (e.g., ontogenetic maturation, sexual reproduction, senescence) of the salp; and 2) the species will show variable levels of clonal diversity and significant genetic differentiation among salp populations in different regions of the Southern Ocean. Samples will be obtained from research cruises during 2011-2013 in diverse regions of the Southern Ocean; dedicated sample and data collection will be carried out during a cruise of the R/V LM GOULD (LMG11-10) to the Western Antarctic Peninsula region in November, 2011. The significance of this effort lies in new understanding of the molecular processes underlying the complex life history and population dynamics of <em>S. thompsoni</em> in relation to the Antarctic pelagic ecosystem and extreme and variable environmental conditions of the Southern Ocean.</p>
<p>Most of the data from this project are available from the Marine Geoscience Data System (MGDS), part of IEDA and is available at <a href="http://www.marine-geo.org/tools/search/Files.php?data_set_uid=18148">http://www.marine-geo.org/tools/search/Files.php?data_set_uid=18148</a>.</p>
Salp_Antarctic
largerWorkCitation
project
eng; USA
oceans
Southern Ocean
-70.907
-53.55507
-65.08178
-53.1695
2011-11-02
2011-12-01
Southern Ocean
0
BCO-DMO catalogue of parameters from Scientific sampling event log from ARSV Laurence M. Gould LMG1110 in the Southern Ocean from Nov. 2011 (Salp_Antarctic project)
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/26495.rdf
Name: event
Units: dimensionless
Description: <p>unique sampling event number derived from local YYYYMMDD.HHMM</p>
http://lod.bco-dmo.org/id/dataset-parameter/26496.rdf
Name: time_local
Units: dimensionless
Description: <p>local time (close to EDT) as 2400 clock HHMM format</p>
http://lod.bco-dmo.org/id/dataset-parameter/26497.rdf
Name: time_utc
Units: dimensionless
Description: <p>time (UTC) using 24 hour clock HHMMSS format</p>
http://lod.bco-dmo.org/id/dataset-parameter/26498.rdf
Name: lat
Units: decimal degrees
Description: <p>latitude (North is positive; South is negative)</p>
http://lod.bco-dmo.org/id/dataset-parameter/26499.rdf
Name: lon
Units: decimal degrees
Description: <p>longitude (East is positive; West is negative)</p>
http://lod.bco-dmo.org/id/dataset-parameter/26500.rdf
Name: inst
Units: dimensionless
Description: <p>name of sampling device</p>
http://lod.bco-dmo.org/id/dataset-parameter/26501.rdf
Name: se_flag
Units: dimensionless
Description: <p>s=start of activity; e=end of activity; s/e=point activity</p>
http://lod.bco-dmo.org/id/dataset-parameter/26502.rdf
Name: station
Units: dimensionless
Description: <p>station number</p>
http://lod.bco-dmo.org/id/dataset-parameter/26503.rdf
Name: cast
Units: dimensionless
Description: <p>cast number</p>
http://lod.bco-dmo.org/id/dataset-parameter/26504.rdf
Name: depth_w
Units: meters
Description: <p>depth of water; seafloor depth from the shipboard 12 kHz Knudsen echosounder</p>
http://lod.bco-dmo.org/id/dataset-parameter/26505.rdf
Name: comments
Units: dimensionless
Description: <p>free text comment</p>
http://lod.bco-dmo.org/id/dataset-parameter/26506.rdf
Name: si
Units: dimensionless
Description: <p>name of investigator responsible for the data from a sampling device</p>
http://lod.bco-dmo.org/id/dataset-parameter/26507.rdf
Name: day_local
Units: unknown
Description: <p>day of month, local time</p>
http://lod.bco-dmo.org/id/dataset-parameter/26508.rdf
Name: month_local
Units: 1-12
Description: <p>month, local time</p>
http://lod.bco-dmo.org/id/dataset-parameter/26509.rdf
Name: day_utc
Units: 1-31
Description: <p>day of month, utc time</p>
http://lod.bco-dmo.org/id/dataset-parameter/26510.rdf
Name: depth
Units: meters
Description: <p>depth of cast or tow</p>
http://lod.bco-dmo.org/id/dataset-parameter/26511.rdf
Name: month_utc
Units: 1-12
Description: <p>month of year, UTC time</p>
http://lod.bco-dmo.org/id/dataset-parameter/26512.rdf
Name: station_std
Units: unknown
Description: <p>standard station number</p>
http://lod.bco-dmo.org/id/dataset-parameter/26513.rdf
Name: date_utc
Units: unitless
Description: <p>date, UTC in yyyyMMdd format</p>
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
30932
https://darchive.mblwhoilibrary.org/bitstream/1912/8438/1/data_event-log-lmg11-10.tsv
download
https://doi.org/10.1575/1912/bco-dmo.661345
download
onLine
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
Cruise: LMG1110
LMG1110
ARSV Laurence M. Gould
Community Standard Description
International Council for the Exploration of the Sea
ARSV Laurence M. Gould
vessel
LMG1110
Ann Bucklin
University of Connecticut
http://data.bcodmo.org/LMG11-10/LMG11-10_Cruise_Report_06dec11.pdf
Report describing LMG1110
ARSV Laurence M. Gould
Community Standard Description
International Council for the Exploration of the Sea
ARSV Laurence M. Gould
vessel