http://lod.bco-dmo.org/id/dataset/3629
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2012-03-02
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
Alongtrack data from R/V Atlantis AT15-61 in the Eastern Tropical South Pacific from January 2010 (Syne_ETSP project)
2012-03-02
publication
2012-03-02
revision
BCO-DMO Linked Data URI
2012-03-02
creation
http://lod.bco-dmo.org/id/dataset/3629
Douglas G. Capone
University of Southern California
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Capone, D. G., Capone, D. G. (2012) Alongtrack data from R/V Atlantis AT15-61 in the Eastern Tropical South Pacific from January 2010 (Syne_ETSP project). Biological and Chemical Oceanography Data Management Office (BCO-DMO). Version Date 2012-03-02 [if applicable, indicate subset used]. http://lod.bco-dmo.org/id/dataset/3629 [access date]
alongtrack data for AT15-61 Dataset Description: <p>The alongtrack data from RV/Atlantis cruise 15-61 were recorded by the shipboard data acquisition system (Calliope).</p>
<p>The research objectives and planned science activities on this cruise include upper water column biogeochemistry and shallow and deep sediment trap deployment at six major (&gt; 24h) stations and 6 minor (&lt; 24h) stations in the Peru Basin.</p> Methods and Sampling:
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-0850801 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=0850801
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-0850905 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=0850905
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-0943319 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=0943319
completed
Douglas G. Capone
University of Southern California
213-740-2772
616 Trousdale Parkway AHF 246
Los Angeles
CA
90089
USA
capone@usc.edu
pointOfContact
asNeeded
Unknown
cog
cond_ss
yrday_gmt
flvolt
head
head2
humidity
humidity2
lat
lon
press_bar
press_bar2
radiation_s
rain_accum
rain_intensity
sal_ss
sog
sound_vel
temp_air
temp_air2
temp_ss
time_gmt
wind_dir_c
wind_dir_r
wind_speed_c
wind_speed_r
Anemometer
Fluorometer
Global Positioning System Receiver
Improved Meteorological Recorder
Knudsen 320 BR deepwater echosounder
Thermosalinograph
Weather transmitter
theme
None, User defined
course over ground
sea surface conductivity
day of year and decimal time (time zone GMT)
flvolt
heading
head2
humidity
latitude
longitude
barometric pressure
radiation_s
precip_level
precipitation rate
sea surface salinity
Speed over ground
sound velocity
air temperature
sea surface temperature
time_gmt
wind_dir_c
wind_dir_r
wind_speed_c
relative wind speed
featureType
BCO-DMO Standard Parameters
Anemometer
Fluorometer
Global Positioning System Receiver
Improved Meteorological Recorder
Knudsen 320 BR deepwater echosounder
Thermosalinograph
Weather Transmitter
instrument
BCO-DMO Standard Instruments
AT15-61
service
Deployment Activity
Eastern Tropical South Pacific
place
Locations
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
RAPID: Synechococcus diversity and Fe stress and the relationship to dissolved metals in the Eastern Tropical South Pacific
https://osprey.bco-dmo.org/project/2248
RAPID: Synechococcus diversity and Fe stress and the relationship to dissolved metals in the Eastern Tropical South Pacific
<p>The unicellular cyanobacterium <i>Synechococcus</i> is one of the most widespread and abundant photosynthetic organisms in the ocean, contributing substantially to marine primary production. It is also extremely diverse, with 16 clades identified so far. This diversity, however, has yet to be correlated with specific, well-defined ecological niches. It is important to define what these ecological niches are in order to determine the significance of <i>Synechococcus</i> diversity, i.e., does the clade present in a certain regime have a large impact on biogeochemical cycling in that area? In parallel, the distribution of the clades must also be defined, to able to understand more clearly the role of Synechococcus in the ocean, and how it might change in the future. In the funded project, "The role of iron (Fe) in controlling in situ distributions and activities of marine <i>Synechococcus</i> OCE-0825922" investigators Jill A Sohm (J.A.S.) and Eric Webb have been mapping the distribution of <i>Synechococcus</i> clades in the western Pacific, the North and South Atlantic, and off the coast of Los Angeles, in order to better define the ecological niches of the many clades of <i>Synechococcus</i>. <b>In this project, Webb and Sohm will participate in a research cruise occurring in February 2010 in the Eastern Tropical South Pacific (ETSP), a data poor region with little known about the ecology of its picocyanobacteria.</b> While it has been shown the <i>Synechococcus</i> from clade four dominate the upwelling region farther south of the proposed cruise, the diversity of the population farther offshore is much less well defined. <b>This cruise would allow expansion of the current database of <i>Synechococcus</i> clade distribution to an area where there is little to no data</b>, and add experimental field work to an existing project, testing the specific affects of Fe, light, temperature and nutrients on the diversity of field populations. These data combined with concurrent lab research will provide insight into the potential of oceanic change to affect the distribution and the activity of <i>Synechococcus</i>.</p>
<p>In addition to defining the role and impact of Fe limitation on marine <i>Synechococcus</i> activity and diversity in the field, this project will develop field incubation-tested, quantitative PCR-based Fe stress diagnostics that will be available to the community. Furthermore, the investigators will attempt to isolate and make available <i>Synechococcus</i> strains from the region; as such representatives are not in existence. The upkeep and addition to the culture collection in the Webb lab is an important service for the oceanographic community, as these strains are sent to any researcher that requests them without charge. Metadata obtained on this cruise will be shared with the oceanographic community by depositing them in a national database. Lastly this project will provide valuable research cruise experience and career development for one post-doctoral fellow, J.A.S., and one graduate student.</p>
Syne_ETSP
largerWorkCitation
project
eng; USA
oceans
Eastern Tropical South Pacific
2012-03-02
Eastern Tropical South Pacific, coast of Chile
0
BCO-DMO catalogue of parameters from Alongtrack data from R/V Atlantis AT15-61 in the Eastern Tropical South Pacific from January 2010 (Syne_ETSP project)
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/27151.rdf
Name: cog
Units: degrees
Description: <p>GPS course over ground</p>
http://lod.bco-dmo.org/id/dataset-parameter/27152.rdf
Name: cond_ss
Units: mmho/cm or milli-Siemens/centimeter
Description: <p>Sea Surface Conductivity (FSI)</p>
http://lod.bco-dmo.org/id/dataset-parameter/27153.rdf
Name: yrday_gmt
Units: no units
Description: <p>GMT day and decimal time, as 326.5 for the 326th day of the year, or November 22 at 1200 hours (noon). </p>
http://lod.bco-dmo.org/id/dataset-parameter/27154.rdf
Name: flvolt
Units: mV
Description: <p>Fluorescence</p>
http://lod.bco-dmo.org/id/dataset-parameter/27155.rdf
Name: head
Units: degrees true
Description: <p>Ship's heading</p>
http://lod.bco-dmo.org/id/dataset-parameter/27156.rdf
Name: head2
Units: degrees true
Description: <p>ship's heading using Phins</p>
http://lod.bco-dmo.org/id/dataset-parameter/27157.rdf
Name: humidity
Units: %
Description: <p>IMET % relative humidity</p>
http://lod.bco-dmo.org/id/dataset-parameter/27158.rdf
Name: humidity2
Units: %
Description: <p>Relative humidity from port side using WXT520</p>
http://lod.bco-dmo.org/id/dataset-parameter/27159.rdf
Name: lat
Units: decimal degrees
Description: <p>Decimal Latitude; South is negative</p>
http://lod.bco-dmo.org/id/dataset-parameter/27160.rdf
Name: lon
Units: decimal degrees
Description: <p>Decimal Longitude; West is negative</p>
http://lod.bco-dmo.org/id/dataset-parameter/27161.rdf
Name: press_bar
Units: no units
Description: <p>Barometric pressure; not corrected for 19.5m height above waterline</p>
http://lod.bco-dmo.org/id/dataset-parameter/27162.rdf
Name: press_bar2
Units: no units
Description: <p>Barometric pressure from port side using WXT520</p>
http://lod.bco-dmo.org/id/dataset-parameter/27163.rdf
Name: radiation_s
Units: watts/square meter
Description: <p>IMET Shortwave Radiation</p>
http://lod.bco-dmo.org/id/dataset-parameter/27164.rdf
Name: rain_accum
Units: mm
Description: <p>Rain accumulation from port side using WXT520</p>
http://lod.bco-dmo.org/id/dataset-parameter/27165.rdf
Name: rain_intensity
Units: mm/h
Description: <p>Rain intensity from port side using WXT520</p>
http://lod.bco-dmo.org/id/dataset-parameter/27166.rdf
Name: sal_ss
Units: psu?
Description: <p>Salinity calculated from SST and SSC</p>
http://lod.bco-dmo.org/id/dataset-parameter/27167.rdf
Name: sog
Units: knots
Description: <p>GPS speed over ground</p>
http://lod.bco-dmo.org/id/dataset-parameter/27168.rdf
Name: sound_vel
Units: meters/second
Description: <p>Sound velocity</p>
http://lod.bco-dmo.org/id/dataset-parameter/27169.rdf
Name: temp_air
Units: degrees C
Description: <p>Air Temp</p>
http://lod.bco-dmo.org/id/dataset-parameter/27170.rdf
Name: temp_air2
Units: degrees C
Description: <p>Air temperature from port side using WXT520</p>
http://lod.bco-dmo.org/id/dataset-parameter/27171.rdf
Name: temp_ss
Units: degrees C
Description: <p>Sea Surface Temperature</p>
http://lod.bco-dmo.org/id/dataset-parameter/27172.rdf
Name: time_gmt
Units: hh:mm:ss
Description: <p>GMT Time</p>
http://lod.bco-dmo.org/id/dataset-parameter/27173.rdf
Name: wind_dir_c
Units: deg
Description: <p>True Wind Direction</p>
http://lod.bco-dmo.org/id/dataset-parameter/27174.rdf
Name: wind_dir_r
Units: degrees ship relative
Description: <p>Relative wind direction from port side using WXT520</p>
http://lod.bco-dmo.org/id/dataset-parameter/27175.rdf
Name: wind_speed_c
Units: m/s
Description: <p>True Wind Speed</p>
http://lod.bco-dmo.org/id/dataset-parameter/27176.rdf
Name: wind_speed_r
Units: m/sec
Description: <p>Relative wind speed from port side using WXT520</p>
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
8856972
https://datadocs.bco-dmo.org/file/3YY3q5ZSmJrm73/alongtrack.csv
alongtrack.csv
Primary data file for dataset ID 3629
download
https://osprey.bco-dmo.org/dataset/3629/data/download
download
onLine
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
Anemometer
Anemometer
PI Supplied Instrument Name: Anemometer PI Supplied Instrument Description:Gill WindObserver II Ultrasonic Anemometer Instrument Name: Anemometer Instrument Short Name:Anemometer Instrument Description: An anemometer is a device for measuring the velocity or the pressure of the wind. It is commonly used to measure wind speed. Aboard research vessels, it is often mounted with other meteorological instruments and sensors. Community Standard Description: http://vocab.nerc.ac.uk/collection/L05/current/101/
Fluorometer
Fluorometer
PI Supplied Instrument Name: Fluorometer PI Supplied Instrument Description:WetLabs Wet-Star fluorometer located in the Hydro Lab clean seawater piping. A MetraByte A/D converter is used to convert the 0-5 vdc fluorometer output to serial data. This device sets the output decimal point as necessary for best resolution, which results in a 1 vdc fluorometer value being represented as +01000.00 in the raw MetraByte serial stream.
Instrument Name: Fluorometer Instrument Short Name:Fluorometer Instrument Description: A fluorometer or fluorimeter is a device used to measure parameters of fluorescence: its intensity and wavelength distribution of emission spectrum after excitation by a certain spectrum of light. The instrument is designed to measure the amount of stimulated electromagnetic radiation produced by pulses of electromagnetic radiation emitted into a water sample or in situ. Community Standard Description: http://vocab.nerc.ac.uk/collection/L05/current/113/
Global Positioning System Receiver
Global Positioning System Receiver
PI Supplied Instrument Name: Global Positioning System Receiver PI Supplied Instrument Description:NorthStar 941 GPS receiver NMEA (National Marine Electronics Association) output
Format:
$--RMC,hhmmss.ss,S,lat,a,lon,a,x.x,y.y,ddmmyy,m.m,d*hh
Time = UTC of position fix
S = Status ("A" = valid, "V" = receiver warning)
Lat & Lon
x.x = speed over ground (knots)
y.y = Course over ground (degrees true)
ddmmyy = date
m.m,d = magnetic variation, degrees ("E" subtracts from true, "W" adds to true)
Instrument Name: Global Positioning System Receiver Instrument Short Name:GPS Instrument Description: The Global Positioning System (GPS) is a U.S. space-based radionavigation system that provides reliable positioning, navigation, and timing services to civilian users on a continuous worldwide basis. The U.S. Air Force develops, maintains, and operates the space and control segments of the NAVSTAR GPS transmitter system. Ships use a variety of receivers (e.g. Trimble and Ashtech) to interpret the GPS signal and determine accurate latitude and longitude. Community Standard Description: http://vocab.nerc.ac.uk/collection/L05/current/POS03/
Improved Meteorological Recorder
Improved Meteorological Recorder
PI Supplied Instrument Name: Improved Meteorological Recorder PI Supplied Instrument Description:Sensors mounted on the bow mast at a height of 20 m above the waterline.
http://www.whoi.edu/page.do?cid=11368&pid=8415&tid=282 Instrument Name: Improved Meteorological Recorder Instrument Short Name:IMET Instrument Description: An IMET Recorder is an instrument package that can be mounted on a ship or buoy to record mean weather data including air and sea-surface temperature, incoming short and long-wave radiation, precipitation, humidity, wind velocity and barometric pressure. Each sensor in the system communicates digitally and returns calibrated values to a central data recorder. Community Standard Description: http://vocab.nerc.ac.uk/collection/L05/current/102/
Knudsen 320 BR deepwater echosounder
Knudsen 320 BR deepwater echosounder
PI Supplied Instrument Name: Knudsen 320 BR deepwater echosounder PI Supplied Instrument Description:Knudsen bathymetry ( Knudsen) Depth to surface (meters).
Format:
$PKEL99,HF,xx.xx,cc.cc,LF,yy.yy,cc.cc,ssss,lat,lon
"HF" High freq header
xx.xx 12 kHz depth to surface using cc.cc & ssss corrections (meters)
cc.cc depth of 12 kHz transducer (meters)
"LF" Low freq header
yy.yy 3.5 kHz depth to surface using cc.cc & ssss corrections (meters)
cc.cc depth of 3.5 kHz transducer (meters)
ssss sound speed used for depth calculations (m/s)
Lat Latitude
Lon Longitude Note - 12 kHz and 3.5 kHz transducers are at 5.95m (19.5 ft) depth on Atlantis. Instrument Name: Knudsen 320 BR deepwater echosounder Instrument Short Name:Knudsen 320 Instrument Description: The Knudsen 320 B/R deepwater echosounder is a digital data logging system used to measure water depth (e.g. depth of the seafloor). The system is configured to work with different frequency transducers. For example, the Edo 323 B is a 12 kHz High Frequency (HF) transducer or it can be configured to work with an array of 3.5 kHz Low Frequency (LF) transducers mounted in the hull of a vessel. Community Standard Description: http://vocab.nerc.ac.uk/collection/L05/current/156/
Thermosalinograph
Thermosalinograph
PI Supplied Instrument Name: Thermosalinograph PI Supplied Instrument Description:Seabird SBE 45 MicroTSG -or- Falmouth Scientific TSG. Located in bow thruster room; intake ~5m BWL Instrument Name: Thermosalinograph Instrument Short Name:TSG Instrument Description: A thermosalinograph (TSG) is used to obtain a continuous record of sea surface temperature and salinity. On many research vessels the TSG is integrated into the ship's underway seawater sampling system and reported with the underway or alongtrack data. Community Standard Description: http://vocab.nerc.ac.uk/collection/L05/current/133/
Weather transmitter
Weather transmitter
PI Supplied Instrument Name: Weather transmitter Instrument Name: Weather Transmitter Instrument Short Name:WXT520 Instrument Description: The ship-mounted Vaisala Weather Transmitter WXT520 measures: Wind speed and direction; Liquid precipitation: rainfall, duration, intensity; Barometric pressure; Air temperature and Relative humidity. (for more information see http://www.vaisala.com/en/products/multiweathersensors/Pages/WXT520.aspx) Community Standard Description: http://vocab.nerc.ac.uk/collection/L05/current/102/
Cruise: AT15-61
AT15-61
R/V Atlantis
Community Standard Description
International Council for the Exploration of the Sea
R/V Atlantis
vessel
AT15-61
Douglas G. Capone
University of Southern California
R/V Atlantis
Community Standard Description
International Council for the Exploration of the Sea
R/V Atlantis
vessel