http://lod.bco-dmo.org/id/dataset/473389
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2013-12-26
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
Nutrient Data from R/V Hugh R. Sharp cruise HRS100808BW in 2010 (Marine Nitrogen Cycling by Stable Isotope Probing project)
2014-01-09
publication
2014-01-09
revision
BCO-DMO Linked Data URI
2014-01-09
creation
http://lod.bco-dmo.org/id/dataset/473389
Boris Wawrik
University of Oklahoma
principalInvestigator
Deborah A. Bronk
Virginia Institute of Marine Science
principalInvestigator
Rachel E. Sipler
Virginia Institute of Marine Science
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Wawrik, B., Sipler, R. E., Bronk, D. A. (2014) Nutrient Data from R/V Hugh R. Sharp cruise HRS100808BW in 2010 (Marine Nitrogen Cycling by Stable Isotope Probing project). Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 09 January 2014) Version Date 2014-01-09 [if applicable, indicate subset used]. http://lod.bco-dmo.org/id/dataset/473389 [access date]
Nutrient Data Dataset Description: <p>Nutrient Data</p> Methods and Sampling:
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-0960806 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=0960806
completed
Boris Wawrik
University of Oklahoma
301-903-4742
Burke
VA
USA
Boris.Wawrik@science.doe.gov
pointOfContact
Deborah A. Bronk
Virginia Institute of Marine Science
207-315-2567
60 Bigelow Drive
East Boothbay
ME
04544
USA
dbronk@bigelow.org
pointOfContact
Rachel E. Sipler
Virginia Institute of Marine Science
804-684-7779
Virginia Institute of Marine Science, College of William and Mary PO Box 1346
Gloucester Point
VA
23062
USA
rachelsipler@gmail.com
pointOfContact
asNeeded
Dataset Version: 09 January 2014
Unknown
Experiment
Station
Lat
Lon
Fraction
Date
Cast_Time
Depth
Ambient_Total_Dissolved_Nitrogen
Ambient_Total_Dissolved_Nitrogen_SD
Ambient_Ammonium
Ambient_Ammonium_SD
Ambient_Nitrite
Ambient_Nitrite_SD
Ambient_Nitrate
Ambient_Nitrate_SD
Ambient_Dissolved_Organic_Nitrogen
Ambient_Dissolved_Organic_Nitrogen_SD
Ambient_Urea
Ambient_Urea_SD
Ambient_Dissolved_Primary_Amines
Ambient_Dissolved_Primary_Amines_SD
Ambient_Phosphate
Ambient_Phosphate_SD
Ambient_Silicate
Ambient_Silicate_SD
CTD SBE 911plus
Niskin bottle
theme
None, User defined
No BCO-DMO term
station
latitude
longitude
date
time of day
depth
featureType
BCO-DMO Standard Parameters
CTD Sea-Bird SBE 911plus
Niskin bottle
instrument
BCO-DMO Standard Instruments
HRS100808BW
service
Deployment Activity
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
Ocean Carbon and Biogeochemistry
http://us-ocb.org/
Ocean Carbon and Biogeochemistry
The Ocean Carbon and Biogeochemistry (OCB) program focuses on the ocean's role as a component of the global Earth system, bringing together research in geochemistry, ocean physics, and ecology that inform on and advance our understanding of ocean biogeochemistry. The overall program goals are to promote, plan, and coordinate collaborative, multidisciplinary research opportunities within the U.S. research community and with international partners. Important OCB-related activities currently include: the Ocean Carbon and Climate Change (OCCC) and the North American Carbon Program (NACP); U.S. contributions to IMBER, SOLAS, CARBOOCEAN; and numerous U.S. single-investigator and medium-size research projects funded by U.S. federal agencies including NASA, NOAA, and NSF.
The scientific mission of OCB is to study the evolving role of the ocean in the global carbon cycle, in the face of environmental variability and change through studies of marine biogeochemical cycles and associated ecosystems.
The overarching OCB science themes include improved understanding and prediction of: 1) oceanic uptake and release of atmospheric CO2 and other greenhouse gases and 2) environmental sensitivities of biogeochemical cycles, marine ecosystems, and interactions between the two.
The OCB Research Priorities (updated January 2012) include: ocean acidification; terrestrial/coastal carbon fluxes and exchanges; climate sensitivities of and change in ecosystem structure and associated impacts on biogeochemical cycles; mesopelagic ecological and biogeochemical interactions; benthic-pelagic feedbacks on biogeochemical cycles; ocean carbon uptake and storage; and expanding low-oxygen conditions in the coastal and open oceans.
OCB
largerWorkCitation
program
Determining rates of group-specific phytoplankton and bacterial uptake of inorganic and organic nitrogen by means of stable isotope techniques
https://osprey.bco-dmo.org/project/2157
Determining rates of group-specific phytoplankton and bacterial uptake of inorganic and organic nitrogen by means of stable isotope techniques
<p>From the NSF award abstract: The marine nitrogen (N) cycle involves a complex network of biological transformations among different inorganic and organic N reservoirs. Considerable progress has been made in defining N cycling processes in marine environments in recent years, but significant questions remain unanswered in part due to methodological limitations. Traditional tools for studying N cycling, for example, cannot accurately assess phytoplankton or bacteria specific N use in marine ecosystems. Therefore there is a need to develop new techniques and methodologies. The PIs of this project have recently made two important advances in this context: (1) a flowcytometric methodology (FCM) to separate phytoplankton from bacteria was applied to separately measure N uptake by these two groups. Prior methodologies relied on measurements of different size fractions, which always contain some degree of both phytoplankton and bacterial uptake. FCM allows for the distinct separation of bacterial versus phytoplankton N incorporation. (2) N-based DNA stable isotope probing (SIP) methodology has been adapted to interrogate N uptake in specific phytoplankton populations. DNA SIP can provide evidence for the uptake of an N source into a specific population of phytoplankton or bacteria. This methodology is in contrast to traditional measurements, which cannot make inferences about individual populations or species.</p>
<p>This project aims to apply these two methodological advances in order to obtain the next generation of N uptake measurements. Phytoplankton and bacteria specific uptake rates will be measured via the FCM technique, and the individual groups or species of phytoplankton or bacteria will be interrogated for N uptake via DNA SIP. These tools will be applied across the well-characterized nutrient gradient found in Chesapeake Bay during one summer cruise and one winter cruise. Phytoplankton, bacterial, and archaeal populations will be characterized along the sampling transect via multiplexed pyrosequencing technology. N uptake will be measured for inorganic (NH4+, NO3-, and NO2-) and organic N sources (15N and 14C urea dual-labeled and amino acids) as substrates. The investigators hypothesize that phytoplankton will derive a larger percentage of their N nutrition from organic forms along the transect (i.e. North to South), as competition with bacteria for ammonium increases. DNA SIP will be applied to specific dominant phytoplankton and bacterial populations in order to investigate their N nutrition. By applying this unique combination of methodologies, the project will provide unprecedented community, group and species level resolution of N uptake in Chesapeake Bay and will furnish us with an improved understanding of N cycling in the Bay and marine systems as a whole.</p>
<p>Related Publication: Wawrik, B; Callaghan, AV; Bronk, DA. "Use of Inorganic and Organic Nitrogen by Synechococcus spp. and Diatoms on the West Florida Shelf as Measured Using Stable Isotope Probing," <i>APPLIED AND ENVIRONMENTAL MICROBIOLOGY</i>, v.75, 2009, p. 6662-6670. <a href="http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=NSF_IR&SrcAuth=NSF&DestLinkType=FullRecord&KeyUT=000271161700005&DestApp=WOS_CPL">View record at Web of Science</a></p>
<p><noscript><a href="citUrl" target="_blank">View record at Web of Science</a><br type="_moz" /><br />
</noscript></p>
Marine Nitrogen Cycling by Stable Isotope Probing
largerWorkCitation
project
eng; USA
oceans
2014-01-09
Chesapeake Bay
0
BCO-DMO catalogue of parameters from Nutrient Data from R/V Hugh R. Sharp cruise HRS100808BW in 2010 (Marine Nitrogen Cycling by Stable Isotope Probing project)
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/473400.rdf
Name: Experiment
Units: text
Description: <p>Experiment</p>
http://lod.bco-dmo.org/id/dataset-parameter/473401.rdf
Name: Station
Units: text
Description: <p>Station</p>
http://lod.bco-dmo.org/id/dataset-parameter/473402.rdf
Name: Lat
Units: decimal degrees
Description: <p>Latitude (South is negative)</p>
http://lod.bco-dmo.org/id/dataset-parameter/473403.rdf
Name: Lon
Units: decimal degrees
Description: <p>Longitude (West is negative)</p>
http://lod.bco-dmo.org/id/dataset-parameter/473404.rdf
Name: Fraction
Units: um
Description: <p>Fraction</p>
http://lod.bco-dmo.org/id/dataset-parameter/473405.rdf
Name: Date
Units: YYYYMMDD
Description: <p>Date</p>
http://lod.bco-dmo.org/id/dataset-parameter/473406.rdf
Name: Cast_Time
Units: HHMM
Description: <p>Cast Time</p>
http://lod.bco-dmo.org/id/dataset-parameter/473407.rdf
Name: Depth
Units: m
Description: <p>Depth</p>
http://lod.bco-dmo.org/id/dataset-parameter/473408.rdf
Name: Ambient_Total_Dissolved_Nitrogen
Units: umol/L
Description: <p>Ambient Total Dissolved Nitrogen</p>
http://lod.bco-dmo.org/id/dataset-parameter/473409.rdf
Name: Ambient_Total_Dissolved_Nitrogen_SD
Units: umol/L
Description: <p>Ambient Total Dissolved Nitrogen SD</p>
http://lod.bco-dmo.org/id/dataset-parameter/473410.rdf
Name: Ambient_Ammonium
Units: umol/L
Description: <p>Ambient Ammonium</p>
http://lod.bco-dmo.org/id/dataset-parameter/473411.rdf
Name: Ambient_Ammonium_SD
Units: umol/L
Description: <p>Ambient Ammonium SD</p>
http://lod.bco-dmo.org/id/dataset-parameter/473412.rdf
Name: Ambient_Nitrite
Units: umol/L
Description: <p>Ambient Nitrite</p>
http://lod.bco-dmo.org/id/dataset-parameter/473413.rdf
Name: Ambient_Nitrite_SD
Units: umol/L
Description: <p>Ambient Nitrite SD</p>
http://lod.bco-dmo.org/id/dataset-parameter/473414.rdf
Name: Ambient_Nitrate
Units: umol/L
Description: <p>Ambient Nitrate</p>
http://lod.bco-dmo.org/id/dataset-parameter/473415.rdf
Name: Ambient_Nitrate_SD
Units: umol/L
Description: <p>Ambient Nitrate SD</p>
http://lod.bco-dmo.org/id/dataset-parameter/473416.rdf
Name: Ambient_Dissolved_Organic_Nitrogen
Units: umol/L
Description: <p>Ambient Dissolved Organic Nitrogen</p>
http://lod.bco-dmo.org/id/dataset-parameter/473417.rdf
Name: Ambient_Dissolved_Organic_Nitrogen_SD
Units: umol/L
Description: <p>Ambient Dissolved Organic Nitrogen SD</p>
http://lod.bco-dmo.org/id/dataset-parameter/473418.rdf
Name: Ambient_Urea
Units: umol/L
Description: <p>Ambient Urea</p>
http://lod.bco-dmo.org/id/dataset-parameter/473419.rdf
Name: Ambient_Urea_SD
Units: umol/L
Description: <p>Ambient Urea SD</p>
http://lod.bco-dmo.org/id/dataset-parameter/473420.rdf
Name: Ambient_Dissolved_Primary_Amines
Units: umol/L
Description: <p>Ambient Dissolved Primary Amines</p>
http://lod.bco-dmo.org/id/dataset-parameter/473421.rdf
Name: Ambient_Dissolved_Primary_Amines_SD
Units: umol/L
Description: <p>Ambient Dissolved Primary Amines SD</p>
http://lod.bco-dmo.org/id/dataset-parameter/473422.rdf
Name: Ambient_Phosphate
Units: umol/L
Description: <p>Ambient Phosphate</p>
http://lod.bco-dmo.org/id/dataset-parameter/473423.rdf
Name: Ambient_Phosphate_SD
Units: umol/L
Description: <p>Ambient Phosphate SD</p>
http://lod.bco-dmo.org/id/dataset-parameter/473424.rdf
Name: Ambient_Silicate
Units: umol/L
Description: <p>Ambient Silicate</p>
http://lod.bco-dmo.org/id/dataset-parameter/473425.rdf
Name: Ambient_Silicate_SD
Units: umol/L
Description: <p>Ambient Silicate SD</p>
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
1289
https://datadocs.bco-dmo.org/file/g77yqlRhGLzNBM/Nuts_15N_Ambient.csv
Nuts_15N_Ambient.csv
Primary data file for dataset ID 473389
download
https://osprey.bco-dmo.org/dataset/473389/data/download
download
onLine
dataset
<p><strong>BCO-DMO Processing Notes</strong><br />
Original file: "BCB2010-FinalDataReport.xlsx", Sheet "Ambient" contributed by Marta Sanderson<br />
- Date coverted to YYYYMMHH<br />
- Time converted to HHMM<br />
- Lon signed negative for West longitude<br />
- Parameter names edited to conform to BCO-DMO parameter naming conventions - "nd" (no data) inserted into blank cells</p>
Specified by the Principal Investigator(s)
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
CTD SBE 911plus
CTD SBE 911plus
PI Supplied Instrument Name: CTD SBE 911plus PI Supplied Instrument Description:CTD System: SeaBird Electronics 911 plus CTD, Rosette is a 12-bottle General Oceanic Model 1015, outfitted with an array of 10 liter bottles. Instrument Name: CTD Sea-Bird SBE 911plus Instrument Short Name:CTD SBE 911plus Instrument Description: The Sea-Bird SBE 911 plus is a type of CTD instrument package for continuous measurement of conductivity, temperature and pressure. The SBE 911 plus includes the SBE 9plus Underwater Unit and the SBE 11plus Deck Unit (for real-time readout using conductive wire) for deployment from a vessel. The combination of the SBE 9 plus and SBE 11 plus is called a SBE 911 plus. The SBE 9 plus uses Sea-Bird's standard modular temperature and conductivity sensors (SBE 3 plus and SBE 4). The SBE 9 plus CTD can be configured with up to eight auxiliary sensors to measure other parameters including dissolved oxygen, pH, turbidity, fluorescence, light (PAR), light transmission, etc.). more information from Sea-Bird Electronics Community Standard Description: http://vocab.nerc.ac.uk/collection/L22/current/TOOL0058/
Niskin bottle
Niskin bottle
PI Supplied Instrument Name: Niskin bottle Instrument Name: Niskin bottle Instrument Short Name:Niskin bottle Instrument Description: A Niskin bottle (a next generation water sampler based on the Nansen bottle) is a cylindrical, non-metallic water collection device with stoppers at both ends. The bottles can be attached individually on a hydrowire or deployed in 12, 24, or 36 bottle Rosette systems mounted on a frame and combined with a CTD. Niskin bottles are used to collect discrete water samples for a range of measurements including pigments, nutrients, plankton, etc. Community Standard Description: http://vocab.nerc.ac.uk/collection/L22/current/TOOL0412/
Cruise: HRS100808BW
HRS100808BW
R/V Hugh R. Sharp
Community Standard Description
International Council for the Exploration of the Sea
R/V Hugh R. Sharp
vessel
HRS100808BW
Boris Wawrik
University of Oklahoma
R/V Hugh R. Sharp
Community Standard Description
International Council for the Exploration of the Sea
R/V Hugh R. Sharp
vessel