http://lod.bco-dmo.org/id/dataset/491463
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2014-02-17
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
Experimental results: calcification by primary coral polyps under high bicarbonate and low pH from 2007-2008 (OA Nutrition and Coral Calcification project)
2014-01-31
publication
2014-01-31
revision
BCO-DMO Linked Data URI
2014-01-31
creation
http://lod.bco-dmo.org/id/dataset/491463
Anne L. Cohen
Woods Hole Oceanographic Institution
principalInvestigator
Samantha J. de Putron
Bermuda Institute of Ocean Sciences
principalInvestigator
Daniel C. McCorkle
Woods Hole Oceanographic Institution
principalInvestigator
Ann M. Tarrant
Woods Hole Oceanographic Institution
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Cohen, A. L., McCorkle, D. C., Tarrant, A. M., de Putron, S. J. (2014) Experimental results: calcification by primary coral polyps under high bicarbonate and low pH from 2007-2008 (OA Nutrition and Coral Calcification project). Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 2014-01-31) Version Date 2014-01-31 [if applicable, indicate subset used]. http://lod.bco-dmo.org/id/dataset/491463 [access date]
Calcification by primary coral polyps under high bicarbonate and low pH Dataset Description: <p>Data used in the published manuscript: ‘The impact of seawater saturation state and bicarbonate ion concentration on calcification by new recruits of two Atlantic corals’. Carbonate chemistry and coral skeletal weights from two aquaria based OA experiments at the Bermuda Institute of Ocean Sciences: in 2007 acid was used to decrease the pH and in 2008 pCO2 bubbling was used. Comparison of the results determined the relative importance of [HCO3-] versus [CO32-] for early calcification by the coral species Favia fragum and Porites astreoides. Data analysis was performed at Woods Hole Oceanographic Institution.</p>
<p>These data have also been deposited to PANGAEA where additional carbonate system variables were calculated as described by Nisumaa et al. (2010; doi: <a href="http://www.earth-syst-sci-data.net/2/167/2010/essd-2-167-2010.html" target="_blank">10.5194/essd-2-167-2010</a>). See: <a href="http://doi.pangaea.de/10.1594/PANGAEA.770070">http://doi.pangaea.de/10.1594/PANGAEA.770070</a></p>
<p><strong>Related References:</strong></p>
<p>de Putron, S. J., D. C. McCorkle, A. L. Cohen, A. B. Dillon.(2011) The impact of seawater saturation state and bicarbonate ion concentration on calcification by new recruits of two Atlantic corals. Coral Reefs,&nbsp;30:321-328. DOI: 10.1007/s00338-010-0697-z</p>
<p>Drenkard, E., Cohen, A.L., McCorkle D.C., de Putron S.J., Zicht, A., Starczak, V. (3013) The Impact of Heterotrophic Feeding on the Coral Calcification Response, Coral Reefs.&nbsp;10.1007/s00338-013-1021-5</p> Methods and Sampling: <p><strong>Larval collection and settlement</strong><br />
Mature colonies of the brooding corals F. fragum and P. astreoides were collected from inshore patch reefs in Bermuda just prior to their predicted time of larval release in July 2007 (F. fragum), August 2007 (P. astreoides), and July 2008 (both species). Colonies were maintained at the Bermuda Institute of Ocean Sciences (BIOS) in outdoor flow-through seawater aquaria under near-ambient temperature and light conditions, and were held in either jars or mesh bags of aerated seawater during the nights of release to isolate the larvae. Zooxanthellate larvae were collected daily as they were released by the adults, and were settled on preconditioned tiles in small (0.5 L) plastic containers of seawater at the saturation state of each experimental aquarium (see below). Preconditioning of tiles was achieved by leaving racks of tiles on nearby reefs for 4-6 weeks, allowing them to obtain the biofilms and algae needed to induce larval settlement. After a settlement period of 24-48 h, the tiles containing metamorphosed primary polyps were transferred to the experimental aquaria. The polyps were grown for two weeks, after which the polyp tissue was removed by bleaching to reveal the underlying corallite. The skeleton of each polyp was removed from the tile and individually weighed using a micro balance. Since all skeletal carbonate retrieved from the experiments was formed under the experimental conditions, total corallite weight provides a direct measure of the amount of calcification (CaCO3 production) achieved by each polyp under the different experimental conditions. For statistical analysis, corallite weight data were square root transformed to meet assumptions and were analyzed using One-Way ANOVA followed by Multiple Comparison of Means TK, GT2, T’ tests (BIOMstat33).</p>
<p><strong>Experimental conditions&nbsp;</strong><br />
Static, 30 L, glass-lidded aquaria containing reef seawater were pre-adjusted to a range of seawater saturation states (Table 1). In 2007, the aquarium seawater alkalinity was decreased by small additions of HCl and bubbled with lab air. The seawater pCO2, calculated from alkalinity and DIC, was approximately 450 ppmv. In 2008, the aquarium seawater pCO2 and DIC levels were set by bubbling with air from a compressor room separate from the lab, and with air+CO2 mixtures produced with pairs of mass flow controllers. The composition of the bubbling gas mixtures in 2008 was monitored daily using a Qubit infra-red CO2 analyzer and mean ppmv ± SD were: 394 ± 9 (ambient air; control), 753 ± 12 (mid CO2), and 2327 ± 23 (high CO2). The seawater temperature in all aquaria in each experiment was monitored using Hobo temperature loggers (Onset Corp.) Average seawater temperatures for the two week period were: 25 °C ± 0.5 (mean ± SD) for 2007 F. fragum; 28.5 ± 0.2 for 2007 P. astreoides; and 29.4 ± 1.3 for both species in 2008. The polyps were not fed during the two week experiments (apart from particulate matter initially present in the aquaria), and were kept on a 12/12 hr light-dark cycle with the maximum light levels achievable with the aquarium lights: mean (± SD) of 61 ± 6 µmol m-2 s-1.&nbsp;</p>
<p>The chemical conditions for all treatments in each experiment are summarized in the manuscript. Salinity was determined with an Autosal salinometer. Discrete water samples for analysis of salinity, alkalinity (Alk), and dissolved inorganic carbon (DIC) were collected weekly; the Alk/DIC samples were poisoned immediately after collection. Alkalinity and DIC were measured using a closed cell titration (inorganic carbon and alkalinity analyser) with non-linear curve fitting on ~100 mL samples, standardized using certified reference materials obtained from Dr. A Dickson (SIO). The pH (NBS) of the aquaria during all experiments was checked twice weekly using an Orion 3-star pH meter and calibrated electrode; the precision of replicate pH measurements was +/- 0.015 units. The measured seawater temperature, salinity, alkalinity, and DIC concentrations were used to calculate other carbonate system parameters ([HCO3-], [CO32-] and Omega), using a spreadsheet version of the CO2SYS program of Lewis and Wallace (1998), with the dissociation constants of Roy et al. (1993) and the aragonite solubility of Mucci (1983). The precision of the titrations was ± 0.2 % for both alkalinity and DIC in ambient seawater, but only ± 0.6 % and ± 1.7 %, respectively, in the most strongly acidified treatment. This resulted in an analytical uncertainty in calculated saturation state of roughly ± 0.5 % at ambient conditions and ± 16 % in the lowest Omega treatment.&nbsp;</p>
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1041052 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1041052
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1041106 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1041106
completed
Anne L. Cohen
Woods Hole Oceanographic Institution
508-289-2958
Geology & Geophysics 266 Woods Hole Rd MS #23
Woods Hole
MA
02543
USA
acohen@whoi.edu
pointOfContact
Samantha J. de Putron
Bermuda Institute of Ocean Sciences
441-297-1880 ext. 261
17 Biological Station St. George's GE01
Bermuda
samantha.deputron@bios.edu
pointOfContact
Daniel C. McCorkle
Woods Hole Oceanographic Institution
508-289-2949
Geology & Geophysics 266 Woods Hole Rd MS #08
Woods Hole
MA
02543
USA
dmccorkle@whoi.edu
pointOfContact
Ann M. Tarrant
Woods Hole Oceanographic Institution
508-289-3398
Biology Department 266 Woods Hole Rd MS #33
Woods Hole
MA
02543
USA
atarrant@whoi.edu
pointOfContact
asNeeded
Dataset Version: 2014-01-31
Unknown
species
date_expt
treatment
weight
weight_se
OM_ar
OM_ar_sd
HCO3
HCO3_sd
CO3
CO3_sd
sal
sal_sd
alkalinity
alk_sd
DIC
DIC_sd
pCO2
pCO2_sd
pH
pH_sd
Aquarium
salinometer
CO2 Analyzer
inorganic carbon and alkalinity analyser
MFC
pH Sensor
Scale
Water Temp Sensor
theme
None, User defined
species scientific name (binomial)
date
treatment
weight
standard error
Aragonite Saturation State
standard deviation
bicarbonate concentration [HCO3]-
Carbonate concentration [CO3]2-
salinity
total alkalinity (TA)
dissolved inorganic Carbon
Partial pressure of CO2
pH
featureType
BCO-DMO Standard Parameters
Aquarium
Autosal salinometer
CO2 Analyzer
MARIANDA VINDTA 3C total inorganic carbon and titration alkalinity analyser
Mass Flow Controller
pH Sensor
scale or balance
Water Temperature Sensor
instrument
BCO-DMO Standard Instruments
lab_dePutron_BIOS
lab_Cohen_WHOI
service
Deployment Activity
St George, Bermuda
Woods Hole, MA
place
Locations
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
Science, Engineering and Education for Sustainability NSF-Wide Investment (SEES): Ocean Acidification (formerly CRI-OA)
https://www.nsf.gov/funding/pgm_summ.jsp?pims_id=503477
Science, Engineering and Education for Sustainability NSF-Wide Investment (SEES): Ocean Acidification (formerly CRI-OA)
NSF Climate Research Investment (CRI) activities that were initiated in 2010 are now included under Science, Engineering and Education for Sustainability NSF-Wide Investment (SEES). SEES is a portfolio of activities that highlights NSF's unique role in helping society address the challenge(s) of achieving sustainability. Detailed information about the SEES program is available from NSF (https://www.nsf.gov/funding/pgm_summ.jsp?pims_id=504707).
In recognition of the need for basic research concerning the nature, extent and impact of ocean acidification on oceanic environments in the past, present and future, the goal of the SEES: OA program is to understand (a) the chemistry and physical chemistry of ocean acidification; (b) how ocean acidification interacts with processes at the organismal level; and (c) how the earth system history informs our understanding of the effects of ocean acidification on the present day and future ocean.
Solicitations issued under this program:
NSF 10-530, FY 2010-FY2011
NSF 12-500, FY 2012
NSF 12-600, FY 2013
NSF 13-586, FY 2014
NSF 13-586 was the final solicitation that will be released for this program.
PI Meetings:
1st U.S. Ocean Acidification PI Meeting(March 22-24, 2011, Woods Hole, MA)
2nd U.S. Ocean Acidification PI Meeting(Sept. 18-20, 2013, Washington, DC)
3rd U.S. Ocean Acidification PI Meeting (June 9-11, 2015, Woods Hole, MA – Tentative)
NSF media releases for the Ocean Acidification Program:
Press Release 10-186 NSF Awards Grants to Study Effects of Ocean Acidification
Discovery Blue Mussels "Hang On" Along Rocky Shores: For How Long?
Discovery nsf.gov - National Science Foundation (NSF) Discoveries - Trouble in Paradise: Ocean Acidification This Way Comes - US National Science Foundation (NSF)
Press Release 12-179 nsf.gov - National Science Foundation (NSF) News - Ocean Acidification: Finding New Answers Through National Science Foundation Research Grants - US National Science Foundation (NSF)
Press Release 13-102 World Oceans Month Brings Mixed News for Oysters
Press Release 13-108 nsf.gov - National Science Foundation (NSF) News - Natural Underwater Springs Show How Coral Reefs Respond to Ocean Acidification - US National Science Foundation (NSF)
Press Release 13-148 Ocean acidification: Making new discoveries through National Science Foundation research grants
Press Release 13-148 - Video nsf.gov - News - Video - NSF Ocean Sciences Division Director David Conover answers questions about ocean acidification. - US National Science Foundation (NSF)
Press Release 14-010 nsf.gov - National Science Foundation (NSF) News - Palau's coral reefs surprisingly resistant to ocean acidification - US National Science Foundation (NSF)
Press Release 14-116 nsf.gov - National Science Foundation (NSF) News - Ocean Acidification: NSF awards $11.4 million in new grants to study effects on marine ecosystems - US National Science Foundation (NSF)
SEES-OA
largerWorkCitation
program
Ocean Carbon and Biogeochemistry
http://us-ocb.org/
Ocean Carbon and Biogeochemistry
The Ocean Carbon and Biogeochemistry (OCB) program focuses on the ocean's role as a component of the global Earth system, bringing together research in geochemistry, ocean physics, and ecology that inform on and advance our understanding of ocean biogeochemistry. The overall program goals are to promote, plan, and coordinate collaborative, multidisciplinary research opportunities within the U.S. research community and with international partners. Important OCB-related activities currently include: the Ocean Carbon and Climate Change (OCCC) and the North American Carbon Program (NACP); U.S. contributions to IMBER, SOLAS, CARBOOCEAN; and numerous U.S. single-investigator and medium-size research projects funded by U.S. federal agencies including NASA, NOAA, and NSF.
The scientific mission of OCB is to study the evolving role of the ocean in the global carbon cycle, in the face of environmental variability and change through studies of marine biogeochemical cycles and associated ecosystems.
The overarching OCB science themes include improved understanding and prediction of: 1) oceanic uptake and release of atmospheric CO2 and other greenhouse gases and 2) environmental sensitivities of biogeochemical cycles, marine ecosystems, and interactions between the two.
The OCB Research Priorities (updated January 2012) include: ocean acidification; terrestrial/coastal carbon fluxes and exchanges; climate sensitivities of and change in ecosystem structure and associated impacts on biogeochemical cycles; mesopelagic ecological and biogeochemical interactions; benthic-pelagic feedbacks on biogeochemical cycles; ocean carbon uptake and storage; and expanding low-oxygen conditions in the coastal and open oceans.
OCB
largerWorkCitation
program
An Investigation of the Role of Nutrition in the Coral Calcification Response to Ocean Acidification
https://osprey.bco-dmo.org/project/2183
An Investigation of the Role of Nutrition in the Coral Calcification Response to Ocean Acidification
<p><i>The project description is a modification of the original NSF award abstract.</i></p>
<p>This research project is part of the larger NSF funded CRI-OA collaborative research initiative and was funded as an Ocean Acidification-Category 1, 2010 award. Over the course of this century, all tropical coral reef ecosystems, whether fringing heavily populated coastlines or lining remote islands and atolls, face unprecedented threat from ocean acidification caused by rising levels of atmospheric CO2. In many laboratory experiments conducted to date, calcium carbonate production (calcification) by scleractinian (stony) corals showed an inverse correlation to seawater saturation state OMEGAar), whether OMEGAar was manipulated by acid or CO2 addition. Based on these data, it is predicted that coral calcification rates could decline by up to 80% of modern values by the end of this century. A growing body of new experimental data however, suggests that the coral calcification response to ocean acidification may be less straightforward and a lot more variable than previously recognized. In at least 10 recent experiments including our own, 8 different tropical and temperate species reared under nutritionally-replete but significantly elevated CO2 conditions (780-1200 ppm, OMEAGar ~1.5-2), continued to calcify at rates comparable to conspecifics reared under ambient CO2. These experimental results are consistent with initial field data collected on reefs in the eastern Pacific and southern Oman, where corals today live and accrete their skeletons under conditions equivalent to 2X and 3X pre-industrial CO2. On these high CO2, high nutrient reefs (where nitrate concentrations typically exceed 2.5 micro-molar), coral growth rates rival, and sometimes even exceed, those of conspecifics in low CO2, oligotrophic reef environments.</p>
<p>The investigators propose that a coral's energetic status, tightly coupled to the availability of inorganic nutrients and/or food, is a key factor in the calcification response to CO2-induced ocean acidification. Their hypothesis, if confirmed by the proposed laboratory investigations, implies that predicted changes in coastal and open ocean nutrient concentrations over the course of this century, driven by both climate impacts on ocean stratification and by increased human activity in coastal regions, could play a critical role in exacerbating and in some areas, modulating the coral reef response to ocean acidification. This research program builds on the investigators initial results and observations. The planned laboratory experiments will test the hypothesis that: (1) The coral calcification response to ocean acidification is linked to the energetic status of the coral host. The relative contribution of symbiont photosynthesis and heterotrophic feeding to a coral's energetic status varies amongst species. Enhancing the energetic status of corals reared under high CO2, either by stimulating photosynthesis with inorganic nutrients or by direct heterotrophic feeding of the host lowers the sensitivity of calcification to decreased seawater OMEGAar; (2) A species-specific threshold CO2 level exists over which enhanced energetic status can no longer compensate for decreased OMEGAar of the external seawater. Similarly, we will test the hypothesis that a nutrient threshold exists over which nutrients become detrimental for calcification even under high CO2 conditions; and (3) Temperature-induced reduction of algal symbionts is one stressor that can reduce the energetic reserve of the coral host and exacerbate the calcification response to ocean acidification.</p>
<p>The investigator's initial findings highlight the critical importance of energetic status in the coral calcification response to ocean acidification. Verification of these findings in the laboratory, and identification of nutrient and CO2 thresholds for a range of species will have immediate, direct impact on predictions of reef resilience in a high CO2 world. The research project brings together a diverse group of expertise in coral biogeochemistry, chemical oceanography, molecular biology and coral reproductive ecology to focus on a problem that has enormous societal, economic and conservation relevance.</p>
OA Nutrition and Coral Calcification
largerWorkCitation
project
eng; USA
oceans
St George, Bermuda; Woods Hole, MA
2014-01-31
global; experimental
0
BCO-DMO catalogue of parameters from Experimental results: calcification by primary coral polyps under high bicarbonate and low pH from 2007-2008 (OA Nutrition and Coral Calcification project)
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/491478.rdf
Name: species
Units: unitless
Description: <p>species of coral used in experiment</p>
http://lod.bco-dmo.org/id/dataset-parameter/491479.rdf
Name: date_expt
Units: unitless
Description: <p>date that experiment was performed</p>
http://lod.bco-dmo.org/id/dataset-parameter/491480.rdf
Name: treatment
Units: unitless
Description: <p>treatment identification</p>
http://lod.bco-dmo.org/id/dataset-parameter/491481.rdf
Name: weight
Units: micrograms
Description: <p>total corallite skeletal weight; average of all replicate tanks for the given experimental treatment</p>
http://lod.bco-dmo.org/id/dataset-parameter/491482.rdf
Name: weight_se
Units: micrograms
Description: <p>standard error of corallite wt</p>
http://lod.bco-dmo.org/id/dataset-parameter/491483.rdf
Name: OM_ar
Units: unitless
Description: <p>omega; aragonite saturation state; average of all replicate tanks for the given experimental treatment. (The saturation state of seawater with respect to aragonite is a measure of the thermodynamic potential for aragonite to form or to dissolve and is defined as the product of the concentrations of dissolved calcium and carbonate ions in seawater divided by their product at equilibrium.)</p>
http://lod.bco-dmo.org/id/dataset-parameter/491484.rdf
Name: OM_ar_sd
Units: unitless
Description: <p>standard deviation of omega</p>
http://lod.bco-dmo.org/id/dataset-parameter/491485.rdf
Name: HCO3
Units: micromoles/kilogram
Description: <p>concentration of bicarbonate ions; average of all replicate tanks for the given experimental treatment</p>
http://lod.bco-dmo.org/id/dataset-parameter/491486.rdf
Name: HCO3_sd
Units: micromoles/kilogram
Description: <p>standard deviation of HCO3</p>
http://lod.bco-dmo.org/id/dataset-parameter/491487.rdf
Name: CO3
Units: micromoles/kilogram
Description: <p>concentration of carbonate ions; average of all replicate tanks for the given experimental treatment</p>
http://lod.bco-dmo.org/id/dataset-parameter/491488.rdf
Name: CO3_sd
Units: micromoles/kilogram
Description: <p>standard deviation of CO3</p>
http://lod.bco-dmo.org/id/dataset-parameter/491489.rdf
Name: sal
Units: psu
Description: <p>average salinity of all replicate tanks for the given experimental treatment</p>
http://lod.bco-dmo.org/id/dataset-parameter/491490.rdf
Name: sal_sd
Units: psu
Description: <p>standard deviation of Salinity</p>
http://lod.bco-dmo.org/id/dataset-parameter/491491.rdf
Name: alkalinity
Units: microequivalent/kilogram
Description: <p>average alkinity of all replicate tanks for the given experimental treatment</p>
http://lod.bco-dmo.org/id/dataset-parameter/491492.rdf
Name: alk_sd
Units: microequivalent/kilogram
Description: <p>standard deviation of Alkalinity</p>
http://lod.bco-dmo.org/id/dataset-parameter/491493.rdf
Name: DIC
Units: micromoles/kilogram
Description: <p>Concentration of dissolved inorganic carbon; average of all replicate tanks for the given experimental treatment</p>
http://lod.bco-dmo.org/id/dataset-parameter/491494.rdf
Name: DIC_sd
Units: micromoles/kilogram
Description: <p>standard deviation of DIC</p>
http://lod.bco-dmo.org/id/dataset-parameter/491495.rdf
Name: pCO2
Units: parts per million by volume
Description: <p>partial pressure of carbon dioxide; average of all replicate tanks for the given experimental treatment</p>
http://lod.bco-dmo.org/id/dataset-parameter/491496.rdf
Name: pCO2_sd
Units: parts per million by volume
Description: <p>standard deviation of pCO2</p>
http://lod.bco-dmo.org/id/dataset-parameter/491497.rdf
Name: pH
Units: unitless
Description: <p>average pH of all replicate tanks for the given experimental treatment; NBS scale</p>
http://lod.bco-dmo.org/id/dataset-parameter/491498.rdf
Name: pH_sd
Units: unitless
Description: <p>standard deviation of pH; NBS scale</p>
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2423
https://datadocs.bco-dmo.org/file/jAABwzAUYVOBk1/coral_chem.csv
coral_chem.csv
Primary data file for dataset ID 491463
download
https://osprey.bco-dmo.org/dataset/491463/data/download
download
onLine
dataset
<p><strong>Larval collection and settlement</strong><br />
Mature colonies of the brooding corals F. fragum and P. astreoides were collected from inshore patch reefs in Bermuda just prior to their predicted time of larval release in July 2007 (F. fragum), August 2007 (P. astreoides), and July 2008 (both species). Colonies were maintained at the Bermuda Institute of Ocean Sciences (BIOS) in outdoor flow-through seawater aquaria under near-ambient temperature and light conditions, and were held in either jars or mesh bags of aerated seawater during the nights of release to isolate the larvae. Zooxanthellate larvae were collected daily as they were released by the adults, and were settled on preconditioned tiles in small (0.5 L) plastic containers of seawater at the saturation state of each experimental aquarium (see below). Preconditioning of tiles was achieved by leaving racks of tiles on nearby reefs for 4-6 weeks, allowing them to obtain the biofilms and algae needed to induce larval settlement. After a settlement period of 24-48 h, the tiles containing metamorphosed primary polyps were transferred to the experimental aquaria. The polyps were grown for two weeks, after which the polyp tissue was removed by bleaching to reveal the underlying corallite. The skeleton of each polyp was removed from the tile and individually weighed using a micro balance. Since all skeletal carbonate retrieved from the experiments was formed under the experimental conditions, total corallite weight provides a direct measure of the amount of calcification (CaCO3 production) achieved by each polyp under the different experimental conditions. For statistical analysis, corallite weight data were square root transformed to meet assumptions and were analyzed using One-Way ANOVA followed by Multiple Comparison of Means TK, GT2, T’ tests (BIOMstat33).</p>
<p><strong>Experimental conditions&nbsp;</strong><br />
Static, 30 L, glass-lidded aquaria containing reef seawater were pre-adjusted to a range of seawater saturation states (Table 1). In 2007, the aquarium seawater alkalinity was decreased by small additions of HCl and bubbled with lab air. The seawater pCO2, calculated from alkalinity and DIC, was approximately 450 ppmv. In 2008, the aquarium seawater pCO2 and DIC levels were set by bubbling with air from a compressor room separate from the lab, and with air+CO2 mixtures produced with pairs of mass flow controllers. The composition of the bubbling gas mixtures in 2008 was monitored daily using a Qubit infra-red CO2 analyzer and mean ppmv ± SD were: 394 ± 9 (ambient air; control), 753 ± 12 (mid CO2), and 2327 ± 23 (high CO2). The seawater temperature in all aquaria in each experiment was monitored using Hobo temperature loggers (Onset Corp.) Average seawater temperatures for the two week period were: 25 °C ± 0.5 (mean ± SD) for 2007 F. fragum; 28.5 ± 0.2 for 2007 P. astreoides; and 29.4 ± 1.3 for both species in 2008. The polyps were not fed during the two week experiments (apart from particulate matter initially present in the aquaria), and were kept on a 12/12 hr light-dark cycle with the maximum light levels achievable with the aquarium lights: mean (± SD) of 61 ± 6 µmol m-2 s-1.&nbsp;</p>
<p>The chemical conditions for all treatments in each experiment are summarized in the manuscript. Salinity was determined with an Autosal salinometer. Discrete water samples for analysis of salinity, alkalinity (Alk), and dissolved inorganic carbon (DIC) were collected weekly; the Alk/DIC samples were poisoned immediately after collection. Alkalinity and DIC were measured using a closed cell titration (inorganic carbon and alkalinity analyser) with non-linear curve fitting on ~100 mL samples, standardized using certified reference materials obtained from Dr. A Dickson (SIO). The pH (NBS) of the aquaria during all experiments was checked twice weekly using an Orion 3-star pH meter and calibrated electrode; the precision of replicate pH measurements was +/- 0.015 units. The measured seawater temperature, salinity, alkalinity, and DIC concentrations were used to calculate other carbonate system parameters ([HCO3-], [CO32-] and Omega), using a spreadsheet version of the CO2SYS program of Lewis and Wallace (1998), with the dissociation constants of Roy et al. (1993) and the aragonite solubility of Mucci (1983). The precision of the titrations was ± 0.2 % for both alkalinity and DIC in ambient seawater, but only ± 0.6 % and ± 1.7 %, respectively, in the most strongly acidified treatment. This resulted in an analytical uncertainty in calculated saturation state of roughly ± 0.5 % at ambient conditions and ± 16 % in the lowest Omega treatment.&nbsp;</p>
Specified by the Principal Investigator(s)
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
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info@bco-dmo.org
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Aquarium
Aquarium
PI Supplied Instrument Name: Aquarium PI Supplied Instrument Description:Static, 30 L, glass-lidded aquaria containing reef seawater. Instrument Name: Aquarium Instrument Short Name:Aquarium Instrument Description: Aquarium - a vivarium consisting of at least one transparent side in which water-dwelling plants or animals are kept
salinometer
salinometer
PI Supplied Instrument Name: salinometer Instrument Name: Autosal salinometer Instrument Short Name:salinometer Instrument Description: The salinometer is an instrument for measuring the salinity of a water sample. Community Standard Description: http://vocab.nerc.ac.uk/collection/L05/current/LAB30/
CO2 Analyzer
CO2 Analyzer
PI Supplied Instrument Name: CO2 Analyzer PI Supplied Instrument Description:Qubit infra-red CO2 analyzer is a non-dispersive infrared CO2 analyzer that measures CO2 in 0 to 2000 ppm range with 1 ppm resolution. The composition of the bubbling gas mixtures was monitored daily using a Qubit infra-red CO2 analyzer.
http://www.qubitbiology.com/animal-and-insect/gas-analysis-control-a-i/s158-co2-analyzer-0-10/ Instrument Name: CO2 Analyzer Instrument Short Name:CO2 Analyzer Instrument Description: Measures atmospheric carbon dioxide (CO2) concentration. Community Standard Description: http://vocab.nerc.ac.uk/collection/L05/current/382/
inorganic carbon and alkalinity analyser
inorganic carbon and alkalinity analyser
PI Supplied Instrument Name: inorganic carbon and alkalinity analyser PI Supplied Instrument Description:The Alk/DIC samples were poisoned with mercuric chloride immediately after collection and analyzed using a Marianda VINDTA-3C analysis system at WHOI. Instrument Name: MARIANDA VINDTA 3C total inorganic carbon and titration alkalinity analyser Instrument Short Name:inorganic carbon and alkalinity analyser Instrument Description: The Versatile INstrument for the Determination of Total inorganic carbon and titration Alkalinity (VINDTA) 3C is a laboratory alkalinity titration system combined with an extraction unit for coulometric titration, which simultaneously determines the alkalinity and dissolved inorganic carbon content of a sample. The sample transport is performed with peristaltic pumps and acid is added to the sample using a membrane pump. No pressurizing system is required and only one gas supply (nitrogen or dry and CO2-free air) is necessary. The system uses a Metrohm Titrino 719S, an ORION-Ross pH electrode and a Metrohm reference electrode. The burette, the pipette and the analysis cell have a water jacket around them. Precision is typically +/- 1 umol/kg for TA and/or DIC in open ocean water. Community Standard Description: http://vocab.nerc.ac.uk/collection/L22/current/TOOL0481/
MFC
MFC
PI Supplied Instrument Name: MFC PI Supplied Instrument Description:Tthe aquarium seawater pCO2 and DIC levels were set by bubbling with air from a compressor room separate from the lab, and with air+CO2 mixtures produced with pairs of mass flow controllers. Instrument Name: Mass Flow Controller Instrument Short Name:MFC Instrument Description: Mass Flow Controller (MFC) - A device used to measure and control the flow of fluids and gases
pH Sensor
pH Sensor
PI Supplied Instrument Name: pH Sensor PI Supplied Instrument Description:The pH (NBS) of the aquaria during all experiments was checked twice weekly using an Orion 3-star pH meter and calibrated electrode; the precision of replicate pH measurements was +/- 0.015 units. Instrument Name: pH Sensor Instrument Short Name:pH Sensor Instrument Description: An instrument that measures the hydrogen ion activity in solutions.
The overall concentration of hydrogen ions is inversely related to its pH. The pH scale ranges from 0 to 14 and indicates whether acidic (more H+) or basic (less H+).
Scale
Scale
PI Supplied Instrument Name: Scale PI Supplied Instrument Description:The skeleton of each polyp was removed from the tile and individually weighed using a micro balance. Instrument Name: scale or balance Instrument Short Name: Instrument Description: Devices that determine the mass or weight of a sample. Community Standard Description: http://vocab.nerc.ac.uk/collection/L05/current/LAB13/
Water Temp Sensor
Water Temp Sensor
PI Supplied Instrument Name: Water Temp Sensor PI Supplied Instrument Description:The seawater temperature in all aquaria in each experiment was monitored using Hobo temperature loggers (Onset Corp.) Instrument Name: Water Temperature Sensor Instrument Short Name:Water Temp Sensor Instrument Description: General term for an instrument that measures the temperature of the water with which it is in contact (thermometer). Community Standard Description: http://vocab.nerc.ac.uk/collection/L05/current/134/
Deployment: lab_dePutron_BIOS
lab_dePutron_BIOS
BIOS
BIOS
laboratory
lab_dePutron_BIOS
Anne L. Cohen
Woods Hole Oceanographic Institution
Deployment: lab_Cohen_WHOI
lab_Cohen_WHOI
WHOI
laboratory
lab_Cohen_WHOI
Anne L. Cohen
Woods Hole Oceanographic Institution
BIOS
BIOS
laboratory
WHOI
laboratory