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                <gmx:Anchor xlink:href="https://ror.org/03taz7m60" xlink:title="ROR ID" xlink:actuate="onRequest">University of Southern California</gmx:Anchor>
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            <gco:CharacterString>Cite this dataset as: Devol, A., Moffett, J. W., Ingalls, A. E., Armbrust, E., Stahl, D. A. (2014) CTD data from R/V Kilo Moana KM1314 in the The North Pacific Ocean (Seattle to Honolulu, including Line P, Station ALOHA), Aug - Sept 2013 (Nitrification and Marine Planktonic Biodiversity project). Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 2014-11-24) Version Date 2014-11-24 [if applicable, indicate subset used]. http://lod.bco-dmo.org/id/dataset/539810 [access date]</gco:CharacterString>
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        <gco:CharacterString>CTD data from cruise KM1314, Aug. 8 - Sept. 4, 2013 in the northern Pacific Dataset Description: &amp;lt;p&amp;gt;Water property data from the North Pacific Ocean, including CTD, dissolved oxygen, chlorophyll fluorescence, PAR, turbidity, beam transmission.&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;&amp;lt;strong&amp;gt;Related Dataset:&amp;lt;/strong&amp;gt;&amp;amp;nbsp;&amp;lt;a href=&amp;quot;http://www.bco-dmo.org/dataset/539724&amp;quot; target=&amp;quot;_blank&amp;quot;&amp;gt;KM1314 bottle&amp;lt;/a&amp;gt;&amp;lt;/p&amp;gt; Methods and Sampling: &amp;lt;p&amp;gt;Samples were collected onboard the R/V Kilo Moana between 8/7 and 9/5 2013. Water property data were collected using a Niskin rosette equipped with a Seabird CTD package and auxiliary sensors, specifically: Seabird 911 CTD, SBE 43 Dissolved Oxygen Sensor, Biospherical/Licor PAR/Irradiance Sensor, WETLabs ECO Chlorophyll Fluorometer, WETLabs C-Star Transmissometer, Seapoint Chlorophyll Fluorometer. Discrete samples for nutrients, oxygen, and prokaryotic cells were collected using a Niskin rosette attached to the sensor package. All CTD sensors were factory calibrated within 1 year of deployment. Nutrient samples were filtered onboard, frozen immediately at -80 degrees C, and subsequently processed at the University of Washington Marine Chemistry Lab using the US-JGOFS protocols. Discrete oxygen samples were analyzed on board using the Carpenter modification of the Winkler method.&amp;amp;nbsp;&amp;lt;/p&amp;gt;</gco:CharacterString>
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        <gmx:Anchor xlink:href="http://lod.bco-dmo.org/id/award/536043.rdf" xlink:title="OCE-1046017" xlink:actuate="onRequest">Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1046017 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1046017</gmx:Anchor>
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            <gmx:Anchor xlink:href="http://lod.bco-dmo.org/id/person/517495.rdf" xlink:title="ORCID" xlink:actuate="onRequest">E. Virginia Armbrust</gmx:Anchor>
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                            <gco:CharacterString>&lt;p&gt;Microorganisms sustain the biogeochemical cycling of nitrogen, one of the most important nutrient cycles on earth. A key step in this cycle, the oxidation of ammonia to nitrite by autotrophic microorganisms, was for a century thought mediated by a few restricted bacterial genera. Significant ammonia oxidation, perhaps most, is now attributed to a previously enigmatic group of Archaea - the ammonia-oxidizing archaea (AOA) - of high abundance in both marine and terrestrial environments. The investigators prior physiological and environmental analyses, the foundation for this proposal, have shown that AOA are active within the marine photic zone and that their competitive fitness in the marine environment is at least in part attributable to an extremely high affinity for ammonia, growing at near maximum growth rates at concentrations of ammonia that would not sustain known bacterial ammonia oxidizers, and an unusual copper-based respiratory system that may render them more competitive in iron limited environments. The compelling inference from these prior analyses is that AOA alter and possibly control the forms of fixed nitrogen available to other microbial assemblages within the photic zone by converting ammonia, a nearly universally available form of nitrogen, into nitrite, a form only available to nitrite oxidizing bacteria and some phytoplankton. If correct, this has a significant impact on biodiversity.&lt;/p&gt;
&lt;p&gt;The PIs will use the most recent technological advances in protein and high throughput sequencing to evaluate the significance of nitrification in shaping biodiversity (genomic and metagenomics), activity (transcriptome, proteome and stable isotope probing), and in controlling availability of an important trace element (copper). In turn, by resolving the environmental and biotic variables that influence the diversity, distribution and activity of AOA, they will advance general understanding of their taxonomy. More directly, functional knowledge of the contribution of AOA to regenerated nitrate will improve estimates of new ocean production (&quot;biological pump&quot;) based on nitrate assimilation, which in the past has mostly neglected the importance of nitrification as a major source of nitrate. Together these studies will transform understanding of the marine nitrogen cycle, estimates of new production, and will ultimately provide a better understanding of the impact of human activity on this critical nutrient cycle.&lt;/p&gt;
&lt;p&gt;The nitrogen cycle has been profoundly affected by anthropogenic inputs of reactive nitrogen into terrestrial, marine, and atmospheric systems having, or predicted to have, major impacts on marine biological production, increased N20 emissions, nitrogen pollution, and eutrophication. Likewise, there is a poor understanding of the relationship between nitrogen cycling and productivity in marine ecosystems. Marine systems are increasingly affected by ocean acidification and by atmospheric inputs of reactive nitrogen. Since both changes greatly alter nitrogen available to microorganisms, the characterization of the response of these environmentally relevant AOA is of tremendous relevance to understanding the affect of acidification and anthropogenic nitrogen inputs on major ocean processes.&lt;/p&gt;
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http://lod.bco-dmo.org/id/dataset-parameter/539843.rdf
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http://lod.bco-dmo.org/id/dataset-parameter/539844.rdf
	Name: fluor
	Units: mg/m^3
	Description: &lt;p&gt;Fluorescence measured by WET Labs ECO-AFL/FL in milligrams per cubic meter.&lt;/p&gt; 
http://lod.bco-dmo.org/id/dataset-parameter/539845.rdf
	Name: fluor_spt
	Units: ?
	Description: &lt;p&gt;Fluorescence, Seapoint.&lt;/p&gt; 
http://lod.bco-dmo.org/id/dataset-parameter/539846.rdf
	Name: sal
	Units: PSU
	Description: &lt;p&gt;Salinity from primary sensor in practical salinity units.&lt;/p&gt; 
http://lod.bco-dmo.org/id/dataset-parameter/539847.rdf
	Name: sal2
	Units: PSU
	Description: &lt;p&gt;Salinity from secondary sensor in practical salinity units.&lt;/p&gt; 
http://lod.bco-dmo.org/id/dataset-parameter/539848.rdf
	Name: sigma_theta
	Units: kg/m^3
	Description: &lt;p&gt;Sigma theta density from primary sensor in kilograms per cubic meter.&lt;/p&gt; 
http://lod.bco-dmo.org/id/dataset-parameter/539849.rdf
	Name: sigma_theta_2
	Units: kg/m^3
	Description: &lt;p&gt;Sigma theta density from secondary sensor in kilograms per cubic meter.&lt;/p&gt; 
http://lod.bco-dmo.org/id/dataset-parameter/539850.rdf
	Name: potemp
	Units: degrees C
	Description: &lt;p&gt;Potential temperature from primary sensor, ITS-90, measured in degrees Celsius.&lt;/p&gt; 
http://lod.bco-dmo.org/id/dataset-parameter/539851.rdf
	Name: potemp2
	Units: degrees C
	Description: &lt;p&gt;Potential temperature from secondary sensor, ITS-90, measured in degrees Celsius.&lt;/p&gt; 
http://lod.bco-dmo.org/id/dataset-parameter/539852.rdf
	Name: beam_c
	Units: 1/m
	Description: &lt;p&gt;Beam attenuation measured by the WET Labs C-Star transmissometer.&lt;/p&gt; 
http://lod.bco-dmo.org/id/dataset-parameter/539853.rdf
	Name: PAR
	Units: unknown
	Description: &lt;p&gt;PAR/Irradiance, Biospherical/Licor&lt;/p&gt; 
http://lod.bco-dmo.org/id/dataset-parameter/539854.rdf
	Name: cruise_id
	Units: unitless
	Description: &lt;p&gt;Cruise identification&lt;/p&gt; 
http://lod.bco-dmo.org/id/dataset-parameter/539855.rdf
	Name: turbidity
	Units: NTU
	Description: &lt;p&gt;Turbidity&lt;/p&gt; 
http://lod.bco-dmo.org/id/dataset-parameter/539856.rdf
	Name: trans
	Units: percent
	Description: &lt;p&gt;Beam transmission&lt;/p&gt; 
http://lod.bco-dmo.org/id/dataset-parameter/539857.rdf
	Name: O2sat
	Units: percent
	Description: &lt;p&gt;Oxygen saturation measured by primary SBE 43 sensor&lt;/p&gt; 
http://lod.bco-dmo.org/id/dataset-parameter/539858.rdf
	Name: O2sat_2
	Units: percent
	Description: &lt;p&gt;Oxygen saturation measured by secondary SBE 43 sensor&lt;/p&gt; 
http://lod.bco-dmo.org/id/dataset-parameter/539870.rdf
	Name: yrday_gmt
	Units: unitless
	Description: &lt;p&gt;UTC day and decimal time, as 326.5 for the 326th day of the year, or November 22 at 1200 hours (noon).&lt;/p&gt; 
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&amp;lt;p&amp;gt;&amp;lt;strong&amp;gt;BCO-DMO Data Processing Notes:&amp;lt;/strong&amp;gt;&amp;lt;/p&amp;gt;

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