http://lod.bco-dmo.org/id/dataset/540354
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2014-11-21
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
Event log from R/V Atlantic Explorer AE1319 in the NW Atlantic from Aug-Sept. 2013 (Biological C:N:P ratios project)
2014-11-21
publication
2014-11-21
revision
Marine Biological Laboratory/Woods Hole Oceanographic Institution Library (MBLWHOI DLA)
2020-12-09
publication
https://doi.org/10.26008/1912/bco-dmo.540354.1
Michael W. Lomas
Bigelow Laboratory for Ocean Sciences
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Lomas, M. W. (2020) Event log from R/V Atlantic Explorer AE1319 in the NW Atlantic from Aug-Sept. 2013 (Biological C:N:P ratios project). Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2014-11-21 [if applicable, indicate subset used]. doi:10.26008/1912/bco-dmo.540354.1 [access date]
Event log for AE1319, Aug-Sept. 2013 Dataset Description: <p>Date, time, position, depth of each CTD sample, with list of analyses for each sample<span style="font-size:12.7272720336914px">&nbsp;and scientist name.</span></p> Methods and Sampling:
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1046001 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1046001
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1046368 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1046368
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1046297 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1046297
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1045966 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1045966
completed
Michael W. Lomas
Bigelow Laboratory for Ocean Sciences
207-315-2567 ext 311
60 Bigelow Drive PO Box 380
East Boothbay
ME
04544
United States
mlomas@bigelow.org
pointOfContact
asNeeded
Dataset Version: 1
Unknown
date
time
ISO_DateTime_UTC
yrday_utc
lat
lon
sample
depth
surface_sample
Johnson_Metabolomics
van_Mooy_Lipids
van_Mooy_PolyP
Bates_DIC
Fawcett_delNO3
Fawcett_delPON
Dziallas_Severin_N2fix
Dziallas_Severin_DNA
Whitney_DNA_RNA
Whitney_Nutrient_Bioassay
Krause_SynSort
Krause_DNA
Krause_32Si
Krause_SXRF
Krause_Bsi
Lomas_Nuts
Lomas_SRP
Lomas_TDP
Lomas_POC_N
Lomas_POP
Lomas_FCM
Lomas_Chla
Lomas_Txn_POC_N_pP_nP
Lomas_Txn_POP_pP_nP
Lomas_biochem_by_fcm
Lomas_Txn_POC_N_P_mP
Lomas_Kinetics_amb_Uptake
Lomas_Paytan_O18_phos
Cetinic_Optics_Particles
Bachman_NPP
Martiny_WGA_DNA
Martiny_RTE
Garcia_NAE
Garcia_VTE
Martiny_test_filter
BATS_O2
BATS_salinity
Pedersen_cilliates
GPS
theme
None, User defined
date
time of day
ISO_DateTime_UTC
UTC day of year and decimal time
latitude
longitude
sample identification
depth
flag
featureType
BCO-DMO Standard Parameters
Global Positioning System Receiver
instrument
BCO-DMO Standard Instruments
AE1319
service
Deployment Activity
NW Atlantic
place
Locations
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
Dimensions of Biodiversity
http://www.nsf.gov/funding/pgm_summ.jsp?pims_id=503446
Dimensions of Biodiversity
(adapted from the NSF Synopsis of Program)
Dimensions of Biodiversity is a program solicitation from the NSF Directorate for Biological Sciences. FY 2010 was year one of the program. [MORE from NSF]
The NSF Dimensions of Biodiversity program seeks to characterize biodiversity on Earth by using integrative, innovative approaches to fill rapidly the most substantial gaps in our understanding. The program will take a broad view of biodiversity, and in its initial phase will focus on the integration of genetic, taxonomic, and functional dimensions of biodiversity. Project investigators are encouraged to integrate these three dimensions to understand the interactions and feedbacks among them. While this focus complements several core NSF programs, it differs by requiring that multiple dimensions of biodiversity be addressed simultaneously, to understand the roles of biodiversity in critical ecological and evolutionary processes.
Dimensions of Biodiversity
largerWorkCitation
program
Ocean Carbon and Biogeochemistry
http://us-ocb.org/
Ocean Carbon and Biogeochemistry
The Ocean Carbon and Biogeochemistry (OCB) program focuses on the ocean's role as a component of the global Earth system, bringing together research in geochemistry, ocean physics, and ecology that inform on and advance our understanding of ocean biogeochemistry. The overall program goals are to promote, plan, and coordinate collaborative, multidisciplinary research opportunities within the U.S. research community and with international partners. Important OCB-related activities currently include: the Ocean Carbon and Climate Change (OCCC) and the North American Carbon Program (NACP); U.S. contributions to IMBER, SOLAS, CARBOOCEAN; and numerous U.S. single-investigator and medium-size research projects funded by U.S. federal agencies including NASA, NOAA, and NSF.
The scientific mission of OCB is to study the evolving role of the ocean in the global carbon cycle, in the face of environmental variability and change through studies of marine biogeochemical cycles and associated ecosystems.
The overarching OCB science themes include improved understanding and prediction of: 1) oceanic uptake and release of atmospheric CO2 and other greenhouse gases and 2) environmental sensitivities of biogeochemical cycles, marine ecosystems, and interactions between the two.
The OCB Research Priorities (updated January 2012) include: ocean acidification; terrestrial/coastal carbon fluxes and exchanges; climate sensitivities of and change in ecosystem structure and associated impacts on biogeochemical cycles; mesopelagic ecological and biogeochemical interactions; benthic-pelagic feedbacks on biogeochemical cycles; ocean carbon uptake and storage; and expanding low-oxygen conditions in the coastal and open oceans.
OCB
largerWorkCitation
program
Biological Controls on the Ocean C:N:P ratios
https://osprey.bco-dmo.org/project/2178
Biological Controls on the Ocean C:N:P ratios
<p>One of the fundamental patterns of ocean biogeochemistry is the Redfield ratio, linking the stoichiometry of surface plankton with the chemistry of the deep ocean. There is no obvious mechanism for the globally consistent C:N:P ratio of 106:16:1 (Redfield ratio), especially as there is substantial elemental variation among plankton communities in different ocean regions. Thus, knowing how biodiversity regulates the elemental composition of the ocean is important for understanding the ocean and climate as a whole -- now and in the future.</p>
<p>The conceptual hypotheses for this study are as follows: 1. The C:N:P ratio of a cell is constrained by its broad taxonomic group, which determines, for example, whether it has an outer shell, its size, functional metabolism, membrane lipid composition. 2. Within a taxon, there is high genetic diversity. Some of this genetic diversity is potentially laterally transferred, or can be lost within taxa, and confers various functional abilities (organic phosphate assimilation, nitrate assimilation, photoheterotrophy, etc.). Functional diversity provides the cell with further flexibility, such as the ability to respond to varying nutrient supply rates/ratios, and affects a cell's C:N:P ratio within the range specified by the taxon. 3. Given these taxonomic and genetic constraints, a cell is physiologically plastic and modifies how it allocates cellular resources in response to nutrient supply rates/ratios in the environment. 4. The microbial diversity (taxonomic, genetic, and functional) of the surface ocean varies over time and space, driven by many factors in addition to nutrients. The sum of this mixture composes the ecosystem C:N:P, the ratio that Redfield described.</p>
<p>Based on this framework, the CoPIs will make field observations of taxon-specific stoichiometry and growth rates, genomic analyses, and conduct laboratory chemostat experiments to improve understanding of how ocean taxonomic, genetic, and functional biodiversity control the stoichiometry of the surface ocean plankton. Their analyses of these data would lead to a mechanistic understanding of variations in the Redfield ratio, both spatially and temporally.</p>
<p>This study will greatly expand knowledge of the genomic diversity among ocean microbes and how this diversity affects biogeochemistry. The stoichiometry of the ocean's microbes is a parameter that nearly every chemical or biological oceanographer uses, from converting measurements made in one element to another, to estimating regional and global nitrogen budgets. The research also has important implications for the global carbon budget and any changes that might result from climate change.</p>
<p>To understand mechanistically temporal and spatial variability of the plankton C:N:P ratio, biodiversity must be studied not only at the traditional taxonomic level, but at the genetic and functional levels which dictate organism response to their environment. Data will be integrated into a combined ocean ecological, evolutionary, and biogeochemical model, with flexible stoichiometry, including cellular biochemical allocations. Seeding a coupled physical-biological model of the oceans with multiple competing genotypes enables the exploration of ecological and evolutionary patterns of resource acquisition and C:N:P ratios. Developing a more mechanistic examination of the course of ecology and evolution, in which laboratory and field data define tradeoffs between different growth and nutrient acquisition strategies, would estabblish the framework of adaptive dynamics for determining "evolutionarily convergence". Finally, model outcomes will be evaluated against field data.</p>
<p>The field work planned for this project includes several cruises: BV46 (September/October 2011), BV48 (September 2012), a June 2013 cruise from Bermuda to the Labrador Sea, and a cruise from Hawaii to Tahiti (May 2014). Additionally, samples will be be acquired during cruises of opportunity.</p>
Biological C:N:P ratios
largerWorkCitation
project
eng; USA
oceans
NW Atlantic
-69.20828
-40.00282
5.17
55.00382
2013-08-15
2013-09-09
western North Atlantic; 60N to 20N along 66W longitude; 20N to 15S in the tropical Pacific
0
BCO-DMO catalogue of parameters from Event log from R/V Atlantic Explorer AE1319 in the NW Atlantic from Aug-Sept. 2013 (Biological C:N:P ratios project)
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/540361.rdf
Name: date
Units: yyyy-mm-dd
Description: <p>UTC date</p>
http://lod.bco-dmo.org/id/dataset-parameter/540362.rdf
Name: time
Units: HH:MM
Description: <p>UTC time</p>
http://lod.bco-dmo.org/id/dataset-parameter/540363.rdf
Name: ISO_DateTime_UTC
Units: yyyy-mm-ddTHH:MMZ
Description: <p>Date/Time (UTC) ISO formatted</p>
http://lod.bco-dmo.org/id/dataset-parameter/540364.rdf
Name: yrday_utc
Units: unitless
Description: <p>UTC day and decimal time: 326.5 for the 326th day of the year or November 22 at 1200 hours (noon)</p>
http://lod.bco-dmo.org/id/dataset-parameter/540365.rdf
Name: lat
Units: decimal degrees
Description: <p>latitude; north is positive</p>
http://lod.bco-dmo.org/id/dataset-parameter/540366.rdf
Name: lon
Units: decimal degrees
Description: <p>longitude; east is positive</p>
http://lod.bco-dmo.org/id/dataset-parameter/540367.rdf
Name: sample
Units: unitless
Description: <p>sample identification</p>
http://lod.bco-dmo.org/id/dataset-parameter/540368.rdf
Name: depth
Units: meters
Description: <p>sample depth</p>
http://lod.bco-dmo.org/id/dataset-parameter/540369.rdf
Name: surface_sample
Units: unitless
Description: <p>flag for surface sample; X=sampled; O=not sampled</p>
http://lod.bco-dmo.org/id/dataset-parameter/540370.rdf
Name: Johnson_Metabolomics
Units: unitless
Description: <p>flag for sample use: scientist name_analysis description; X=sampled; O=not sampled</p>
http://lod.bco-dmo.org/id/dataset-parameter/540371.rdf
Name: van_Mooy_Lipids
Units: unitless
Description: <p>flag for sample use: scientist name_analysis description; X=sampled; O=not sampled</p>
http://lod.bco-dmo.org/id/dataset-parameter/540372.rdf
Name: van_Mooy_PolyP
Units: unitless
Description: <p>flag for sample use: scientist name_analysis description; X=sampled; O=not sampled</p>
http://lod.bco-dmo.org/id/dataset-parameter/540373.rdf
Name: Bates_DIC
Units: unitless
Description: <p>flag for sample use: scientist name_analysis description; X=sampled; O=not sampled</p>
http://lod.bco-dmo.org/id/dataset-parameter/540374.rdf
Name: Fawcett_delNO3
Units: unitless
Description: <p>flag for sample use: scientist name_analysis description; X=sampled; O=not sampled</p>
http://lod.bco-dmo.org/id/dataset-parameter/540375.rdf
Name: Fawcett_delPON
Units: unitless
Description: <p>flag for sample use: scientist name_analysis description; X=sampled; O=not sampled</p>
http://lod.bco-dmo.org/id/dataset-parameter/540376.rdf
Name: Dziallas_Severin_N2fix
Units: unitless
Description: <p>flag for sample use: scientist name_analysis description; X=sampled; O=not sampled</p>
http://lod.bco-dmo.org/id/dataset-parameter/540377.rdf
Name: Dziallas_Severin_DNA
Units: unitless
Description: <p>flag for sample use: scientist name_analysis description; X=sampled; O=not sampled</p>
http://lod.bco-dmo.org/id/dataset-parameter/540378.rdf
Name: Whitney_DNA_RNA
Units: unitless
Description: <p>flag for sample use: scientist name_analysis description; X=sampled; O=not sampled</p>
http://lod.bco-dmo.org/id/dataset-parameter/540379.rdf
Name: Whitney_Nutrient_Bioassay
Units: unitless
Description: <p>flag for sample use: scientist name_analysis description; X=sampled; O=not sampled</p>
http://lod.bco-dmo.org/id/dataset-parameter/540380.rdf
Name: Krause_SynSort
Units: unitless
Description: <p>flag for sample use: scientist name_analysis description; X=sampled; O=not sampled</p>
http://lod.bco-dmo.org/id/dataset-parameter/540381.rdf
Name: Krause_DNA
Units: unitless
Description: <p>flag for sample use: scientist name_analysis description; X=sampled; O=not sampled</p>
http://lod.bco-dmo.org/id/dataset-parameter/540382.rdf
Name: Krause_32Si
Units: unitless
Description: <p>flag for sample use: scientist name_analysis description; X=sampled; O=not sampled</p>
http://lod.bco-dmo.org/id/dataset-parameter/540383.rdf
Name: Krause_SXRF
Units: unitless
Description: <p>flag for sample use: scientist name_analysis description; X=sampled; O=not sampled</p>
http://lod.bco-dmo.org/id/dataset-parameter/540384.rdf
Name: Krause_Bsi
Units: unitless
Description: <p>flag for sample use: scientist name_analysis description; X=sampled; O=not sampled</p>
http://lod.bco-dmo.org/id/dataset-parameter/540385.rdf
Name: Lomas_Nuts
Units: unitless
Description: <p>flag for sample use: scientist name_analysis description; X=sampled; O=not sampled</p>
http://lod.bco-dmo.org/id/dataset-parameter/540386.rdf
Name: Lomas_SRP
Units: unitless
Description: <p>flag for sample use: scientist name_analysis description; X=sampled; O=not sampled</p>
http://lod.bco-dmo.org/id/dataset-parameter/540387.rdf
Name: Lomas_TDP
Units: unitless
Description: <p>flag for sample use: scientist name_analysis description; X=sampled; O=not sampled</p>
http://lod.bco-dmo.org/id/dataset-parameter/540388.rdf
Name: Lomas_POC_N
Units: unitless
Description: <p>flag for sample use: scientist name_analysis description; X=sampled; O=not sampled</p>
http://lod.bco-dmo.org/id/dataset-parameter/540389.rdf
Name: Lomas_POP
Units: unitless
Description: <p>flag for sample use: scientist name_analysis description; X=sampled; O=not sampled</p>
http://lod.bco-dmo.org/id/dataset-parameter/540390.rdf
Name: Lomas_FCM
Units: unitless
Description: <p>flag for sample use: scientist name_analysis description; X=sampled; O=not sampled</p>
http://lod.bco-dmo.org/id/dataset-parameter/540391.rdf
Name: Lomas_Chla
Units: unitless
Description: <p>flag for sample use: scientist name_analysis description; X=sampled; O=not sampled</p>
http://lod.bco-dmo.org/id/dataset-parameter/540392.rdf
Name: Lomas_Txn_POC_N_pP_nP
Units: unitless
Description: <p>flag for sample use: scientist name_analysis description; X=sampled; O=not sampled</p>
http://lod.bco-dmo.org/id/dataset-parameter/540393.rdf
Name: Lomas_Txn_POP_pP_nP
Units: unitless
Description: <p>flag for sample use: scientist name_analysis description; X=sampled; O=not sampled</p>
http://lod.bco-dmo.org/id/dataset-parameter/540394.rdf
Name: Lomas_biochem_by_fcm
Units: unitless
Description: <p>flag for sample use: scientist name_analysis description; X=sampled; O=not sampled</p>
http://lod.bco-dmo.org/id/dataset-parameter/540395.rdf
Name: Lomas_Txn_POC_N_P_mP
Units: unitless
Description: <p>flag for sample use: scientist name_analysis description; X=sampled; O=not sampled</p>
http://lod.bco-dmo.org/id/dataset-parameter/540396.rdf
Name: Lomas_Kinetics_amb_Uptake
Units: unitless
Description: <p>flag for sample use: scientist name_analysis description; X=sampled; O=not sampled</p>
http://lod.bco-dmo.org/id/dataset-parameter/540397.rdf
Name: Lomas_Paytan_O18_phos
Units: unitless
Description: <p>flag for sample use: scientist name_analysis description; X=sampled; O=not sampled</p>
http://lod.bco-dmo.org/id/dataset-parameter/540398.rdf
Name: Cetinic_Optics_Particles
Units: unitless
Description: <p>flag for sample use: scientist name_analysis description; X=sampled; O=not sampled</p>
http://lod.bco-dmo.org/id/dataset-parameter/540399.rdf
Name: Bachman_NPP
Units: unitless
Description: <p>flag for sample use: scientist name_analysis description; X=sampled; O=not sampled</p>
http://lod.bco-dmo.org/id/dataset-parameter/540400.rdf
Name: Martiny_WGA_DNA
Units: unitless
Description: <p>flag for sample use: scientist name_analysis description; X=sampled; O=not sampled</p>
http://lod.bco-dmo.org/id/dataset-parameter/540401.rdf
Name: Martiny_RTE
Units: unitless
Description: <p>flag for sample use: scientist name_analysis description; X=sampled; O=not sampled</p>
http://lod.bco-dmo.org/id/dataset-parameter/540402.rdf
Name: Garcia_NAE
Units: unitless
Description: <p>flag for sample use: scientist name_analysis description; X=sampled; O=not sampled</p>
http://lod.bco-dmo.org/id/dataset-parameter/540403.rdf
Name: Garcia_VTE
Units: unitless
Description: <p>flag for sample use: scientist name_analysis description; X=sampled; O=not sampled</p>
http://lod.bco-dmo.org/id/dataset-parameter/540404.rdf
Name: Martiny_test_filter
Units: unitless
Description: <p>flag for sample use: scientist name_analysis description; X=sampled; O=not sampled</p>
http://lod.bco-dmo.org/id/dataset-parameter/540405.rdf
Name: BATS_O2
Units: unitless
Description: <p>flag for sample use: scientist name_analysis description; X=sampled; O=not sampled</p>
http://lod.bco-dmo.org/id/dataset-parameter/540406.rdf
Name: BATS_salinity
Units: unitless
Description: <p>flag for sample use: scientist name_analysis description; X=sampled; O=not sampled</p>
http://lod.bco-dmo.org/id/dataset-parameter/540407.rdf
Name: Pedersen_cilliates
Units: unitless
Description: <p>flag for sample use: scientist name_analysis description; X=sampled; O=not sampled</p>
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
204615
https://darchive.mblwhoilibrary.org/bitstream/1912/26463/1/dataset-540354_ctd-sample-log-ae1319__v1.tsv
download
https://doi.org/10.26008/1912/bco-dmo.540354.1
download
onLine
dataset
<p>Generated from original Excel file: AE1319_event_log.xlsx contributed by Mike Lomas.</p>
<p><strong>BCO-DMO Processing:</strong></p>
<p>- added conventional header with dataset name, PI name, version date<br />
- renamed parameters to BCO-DMO standard<br />
- reformated data from mmddyyyy to yyyy-mm-dd<br />
- replaced spaces and other special characters with underscore<br />
- replaced blank cells with nd<br />
- converted lat/lon to decimal degrees</p>
Specified by the Principal Investigator(s)
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
GPS
GPS
PI Supplied Instrument Name: GPS Instrument Name: Global Positioning System Receiver Instrument Short Name:GPS Instrument Description: The Global Positioning System (GPS) is a U.S. space-based radionavigation system that provides reliable positioning, navigation, and timing services to civilian users on a continuous worldwide basis. The U.S. Air Force develops, maintains, and operates the space and control segments of the NAVSTAR GPS transmitter system. Ships use a variety of receivers (e.g. Trimble and Ashtech) to interpret the GPS signal and determine accurate latitude and longitude. Community Standard Description: http://vocab.nerc.ac.uk/collection/L05/current/POS03/
Cruise: AE1319
AE1319
R/V Atlantic Explorer
Community Standard Description
International Council for the Exploration of the Sea
R/V Atlantic Explorer
vessel
AE1319
Michael W. Lomas
Bigelow Laboratory for Ocean Sciences
http://dmoserv3.whoi.edu/data_docs/Bio_CNP_Ratios/AE1319_Cruise_Report_09182013_reduced2.pdf
Report describing AE1319
R/V Atlantic Explorer
Community Standard Description
International Council for the Exploration of the Sea
R/V Atlantic Explorer
vessel