http://lod.bco-dmo.org/id/dataset/553241
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2015-03-11
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
Diazotroph abundances (nifH gene) from multiple HOE-DYLAN cruises from July to September 2012 (C-MORE project)
2023-08-15
publication
2023-08-15
revision
Marine Biological Laboratory/Woods Hole Oceanographic Institution Library (MBLWHOI DLA)
2023-09-07
publication
https://doi.org/10.26008/1912/bco-dmo.553241.1
Jonathan P. Zehr
University of California-Santa Cruz
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Zehr, J. P. (2023) Diazotroph abundances (nifH gene) from multiple HOE-DYLAN cruises from July to September 2012 (C-MORE project). Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2023-08-15 [if applicable, indicate subset used]. doi:10.26008/1912/bco-dmo.553241.1 [access date]
HOE-DYLAN cruises - Diazotrophs Dataset Description: <p>Diazotroph abundances (nifH gene).</p>
<p>Oligotrophic waters 100 miles north of Oahu, Hawaii, near Station ALOHA (22.75 N, 158.00 W).</p>
<p><a href="http://hahana.soest.hawaii.edu/hoedylan/hoedylan.html" target="_blank">Hawaii Ocean Experiment - Dynamics of Light and Nutrients (HOE-DYLAN)</a></p> Methods and Sampling:
Funding provided by NSF Division of Biological Infrastructure (NSF DBI) Award Number: DBI-0424599 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=0424599
completed
Jonathan P. Zehr
University of California-Santa Cruz
831-459 4009
E&MS A438, Ocean Sciences Department 1156 High Street
Santa Cruz
CA
95064
USA
zehrj@ucsc.edu
pointOfContact
asNeeded
Dataset Version: 1
Unknown
cruise_id
sta
date
lat
lon
depth
UCYN_A
UCYN_A_log_xplus1_DNA
UCYN_A2
UCYN_A2_log_xplus1_DNA
UCYN_B
UCYN_B_log_xplus1_DNA
g_Pia
g_Pia_log_xplus1_DNA
Het_1
Het_1_log_xplus1_DNA
Het_2
Het_2_log_xplus1_DNA
tricho
tricho_log_xplus1_DNA
CTD Sea-Bird SBE 911plus
Niskin bottle
theme
None, User defined
Cruise identfier
station number
date
latitude
longitude
depth
UCYN_A
abundance
Het_1
Het_2
tricho
featureType
BCO-DMO Standard Parameters
CTD Sea-Bird SBE 911plus
Niskin bottle
instrument
BCO-DMO Standard Instruments
KM1215
KM1217
KM1219
service
Deployment Activity
Station ALOHA, an oligotrophic station 100 miles north of Oahu, Hawaii (22.75 N, 158 W)
Station ALOHA, an oligotrophic station 100 miles north of Oahu, Hawaii (22.75N, 158W)
place
Locations
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
Center for Microbial Oceanography: Research and Education
http://cmore.soest.hawaii.edu/
Center for Microbial Oceanography: Research and Education
<h3>Project summary</h3>
<p>The <strong>Center for Microbial Oceanography: Research and Education</strong> (C-MORE) is a recently established (August 2006; NSF award: EF-0424599) NSF-sponsored Science and Technology Center designed to facilitate a more comprehensive understanding of the diverse assemblages of microorganisms in the sea, ranging from the genetic basis of marine microbial biogeochemistry including the metabolic regulation and environmental controls of gene expression, to the processes that underpin the fluxes of carbon, related bioelements and energy in the marine environment. Stated holistically, C-MORE's primary mission is: <em>Linking Genomes to Biomes</em>.</p>
<p>We believe that the time is right to address several major, long-standing questions in microbial oceanography. Recent advances in the application of molecular techniques have provided an unprecedented view of the structure, diversity and possible function of sea microbes. By combining these and other novel approaches with more well-established techniques in microbiology, oceanography and ecology, it may be possible to develop a meaningful predictive understanding of the ocean with respect to energy transduction, carbon sequestration, bioelement cycling and the probable response of marine ecosystems to global environmental variability and climate change. The strength of C-MORE resides in the synergy created by bringing together experts who traditionally have not worked together and this, in turn, will facilitate the creation and dissemination of new knowledge on the role of marine microbes in global habitability.</p>
<p>The new Center will design and conduct novel research, broker partnerships, increase diversity of human resources, implement education and outreach programs, and utilize comprehensive information about microbial life in the sea. The Center will bring together teams of scientists, educators and community members who otherwise do not have an opportunity to communicate, collaborate or design creative solutions to long-term ecosystem scale problems. The Center's research will be organized around four interconnected themes:</p>
<ul>
<li>(Theme I) microbial biodiversity,</li>
<li>(Theme II) metabolism and C-N-P-energy flow,</li>
<li>(Theme III) remote and continuous sensing and links to climate variability, and</li>
<li>(Theme IV) ecosystem modeling, simulation and prediction.</li>
</ul>
<p> Each theme will have a leader to help coordinate the research programs and to facilitate interactions among the other related themes. The education programs will focus on pre-college curriculum enhancements, in service teacher training and formal undergraduate/graduate and post-doctoral programs to prepare the next generation of microbial oceanographers. The Center will establish and maintain creative outreach programs to help diffuse the new knowledge gained into society at large including policymakers. The Center's activities will be dispersed among five partner institutions:</p>
<ul>
<li>Massachusetts Institute of Technology,</li>
<li>Woods Hole Oceanographic Institution,</li>
<li>Monterey Bay Aquarium Research Institute,</li>
<li>University of California at Santa Cruz and</li>
<li>Oregon State University</li>
</ul>
<p>and will be coordinated at the University of Hawaii at Manoa.</p>
<h4>Related Files:</h4>
<p><a href="http://bcodata.whoi.edu/C-MORE/C-MORE_SIP_ver_09-01-2008.pdf">Strategic plan (PDF file)</a></p>
C-MORE
largerWorkCitation
project
eng; USA
oceans
Station ALOHA, an oligotrophic station 100 miles north of Oahu, Hawaii (22.75 N, 158 W); Station ALOHA, an oligotrophic station 100 miles north of Oahu, Hawaii (22.75N, 158W)
-158
-158
22.75
22.75
2012-07-09
2012-09-03
North Pacific Subtropical Gyre (large region around 22 45 N, 158 W)
0
BCO-DMO catalogue of parameters from Diazotroph abundances (nifH gene) from multiple HOE-DYLAN cruises from July to September 2012 (C-MORE project)
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/553293.rdf
Name: cruise_id
Units: unitless
Description: <p>cruise name</p>
http://lod.bco-dmo.org/id/dataset-parameter/553294.rdf
Name: sta
Units: unitless
Description: <p>station number</p>
http://lod.bco-dmo.org/id/dataset-parameter/553295.rdf
Name: date
Units: unitless
Description: <p>sampling date (UTC)</p>
http://lod.bco-dmo.org/id/dataset-parameter/553296.rdf
Name: lat
Units: decimal degrees (South is negative)
Description: <p>latitude</p>
http://lod.bco-dmo.org/id/dataset-parameter/553297.rdf
Name: lon
Units: decimal degrees (West is negative)
Description: <p>longitude</p>
http://lod.bco-dmo.org/id/dataset-parameter/553298.rdf
Name: depth
Units: meters
Description: <p>depth</p>
http://lod.bco-dmo.org/id/dataset-parameter/553299.rdf
Name: UCYN_A
Units: copies/liter
Description: <p>cyanobacterium UCYN-A (average total)</p>
http://lod.bco-dmo.org/id/dataset-parameter/553300.rdf
Name: UCYN_A_log_xplus1_DNA
Units: copies/liter
Description: <p>cyanobacterium UCYN-A log(x+1) DNA</p>
http://lod.bco-dmo.org/id/dataset-parameter/553301.rdf
Name: UCYN_A2
Units: copies/liter
Description: <p>cyanobacterium UCYN-A2 (average total)</p>
http://lod.bco-dmo.org/id/dataset-parameter/553302.rdf
Name: UCYN_A2_log_xplus1_DNA
Units: copies/liter
Description: <p>cyanobacterium UCYN-A2 log(x+1) DNA</p>
http://lod.bco-dmo.org/id/dataset-parameter/553303.rdf
Name: UCYN_B
Units: copies/liter
Description: <p>cyanobacterium UCYN-B (average total)</p>
http://lod.bco-dmo.org/id/dataset-parameter/553304.rdf
Name: UCYN_B_log_xplus1_DNA
Units: copies/liter
Description: <p>cyanobacterium UCYN-B log(x+1) DNA</p>
http://lod.bco-dmo.org/id/dataset-parameter/553305.rdf
Name: g_Pia
Units: copies/liter
Description: <p>gammaproteobacterium Gamma Pia (average total)</p>
http://lod.bco-dmo.org/id/dataset-parameter/553306.rdf
Name: g_Pia_log_xplus1_DNA
Units: copies/liter
Description: <p>gammaproteobacterium Gamma Pia log(x+1) DNA</p>
http://lod.bco-dmo.org/id/dataset-parameter/553307.rdf
Name: Het_1
Units: copies/liter
Description: <p>heterotrophic strain Het 1 (average total)</p>
http://lod.bco-dmo.org/id/dataset-parameter/553308.rdf
Name: Het_1_log_xplus1_DNA
Units: copies/liter
Description: <p>heterotrophic strain Het 1 log(x+1) DNA</p>
http://lod.bco-dmo.org/id/dataset-parameter/553309.rdf
Name: Het_2
Units: copies/liter
Description: <p>heterotrophic strain Het 2 (average total)</p>
http://lod.bco-dmo.org/id/dataset-parameter/553310.rdf
Name: Het_2_log_xplus1_DNA
Units: copies/liter
Description: <p>heterotrophic strain Het 2 log(x+1) DNA</p>
http://lod.bco-dmo.org/id/dataset-parameter/553311.rdf
Name: tricho
Units: copies/liter
Description: <p>Trichodesmium (average total)</p>
http://lod.bco-dmo.org/id/dataset-parameter/553312.rdf
Name: tricho_log_xplus1_DNA
Units: copies/liter
Description: <p>Trichodesmium log(x+1) DNA</p>
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
4507
https://darchive.mblwhoilibrary.org/server/api/core/bitstreams/4d9fe351-c76c-4d09-a19b-79178d991a92/content
download
https://doi.org/10.26008/1912/bco-dmo.553241.1
download
onLine
dataset
The date column in the submitted file was converted to a format YYYY-MM-DD
Specified by BCO-DMO Data Managers
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
CTD Sea-Bird SBE 911plus
CTD Sea-Bird SBE 911plus
PI Supplied Instrument Name: CTD Sea-Bird SBE 911plus Instrument Name: CTD Sea-Bird SBE 911plus Instrument Short Name:CTD SBE 911plus Instrument Description: The Sea-Bird SBE 911 plus is a type of CTD instrument package for continuous measurement of conductivity, temperature and pressure. The SBE 911 plus includes the SBE 9plus Underwater Unit and the SBE 11plus Deck Unit (for real-time readout using conductive wire) for deployment from a vessel. The combination of the SBE 9 plus and SBE 11 plus is called a SBE 911 plus. The SBE 9 plus uses Sea-Bird's standard modular temperature and conductivity sensors (SBE 3 plus and SBE 4). The SBE 9 plus CTD can be configured with up to eight auxiliary sensors to measure other parameters including dissolved oxygen, pH, turbidity, fluorescence, light (PAR), light transmission, etc.). more information from Sea-Bird Electronics Community Standard Description: http://vocab.nerc.ac.uk/collection/L22/current/TOOL0058/
Niskin bottle
Niskin bottle
PI Supplied Instrument Name: Niskin bottle Instrument Name: Niskin bottle Instrument Short Name:Niskin bottle Instrument Description: A Niskin bottle (a next generation water sampler based on the Nansen bottle) is a cylindrical, non-metallic water collection device with stoppers at both ends. The bottles can be attached individually on a hydrowire or deployed in 12, 24, or 36 bottle Rosette systems mounted on a frame and combined with a CTD. Niskin bottles are used to collect discrete water samples for a range of measurements including pigments, nutrients, plankton, etc. Community Standard Description: http://vocab.nerc.ac.uk/collection/L22/current/TOOL0412/
Cruise: KM1215
KM1215
R/V Kilo Moana
Community Standard Description
International Council for the Exploration of the Sea
R/V Kilo Moana
vessel
KM1215
Samuel T. Wilson
University of Hawai'i
Cruise: KM1217
KM1217
R/V Kilo Moana
Community Standard Description
International Council for the Exploration of the Sea
R/V Kilo Moana
vessel
KM1217
Sonya T. Dyhrman
Woods Hole Oceanographic Institution
Cruise: KM1219
KM1219
R/V Kilo Moana
Community Standard Description
International Council for the Exploration of the Sea
R/V Kilo Moana
vessel
KM1219
Samuel T. Wilson
University of Hawai'i
R/V Kilo Moana
Community Standard Description
International Council for the Exploration of the Sea
R/V Kilo Moana
vessel