Processed CTD data from six cruises of the DeZoZoo project from R/V Hugh R. Sharp in the Chesapeake Bay from 2010-2011 (DeZoZoo project)

Website: https://www.bco-dmo.org/dataset/561249
Data Type: Cruise Results
Version: working
Version Date: 2015-06-29

Project
» Hypoxia in Marine Ecosystems: Implications for Neritic Copepods (DeZoZoo)
ContributorsAffiliationRole
Pierson, James J.University of Maryland Center for Environmental Science (UMCES/HPL)Principal Investigator
Decker, Mary BethYale UniversityContact
Houde, EdwardUniversity of Maryland Center for Environmental Science (UMCES/HPL)Contact
Roman, Michael R.University of Maryland Center for Environmental Science (UMCES/HPL)Contact
Stoecker, DianeUniversity of Maryland Center for Environmental Science (UMCES/HPL)Contact
Allison, DickyWoods Hole Oceanographic Institution (WHOI BCO-DMO)BCO-DMO Data Manager


Coverage

Spatial Extent: N:39.5371 E:-74.9864 S:37.4565 W:-76.6289
Temporal Extent: 2010-05-24 - 2011-12-21

Dataset Description

These are the processed CTD data from the DeZoZoo project taken from the mesohaline portion of Chesapeake Bay from 37.5 - 38.5 degrees N and from 76 - 76.5 degrees West.


Methods & Sampling

Data were collected using the shipboard SeaBird 9plus CTD fitted with a variety of sensors. Sensors are listed in the table below:

CTD was lowered to within 2 m of the bottom slowly, with bottom depth determined by CTD mounted altimeter. If samples were collected on a given CTD cast, they were collected as the CTD was raised back to the surface using the attached Rosette fitted with 10L Niskin Bottles. 

 

Sensor Serial Number
SBE 9plus pressure 0445
SBE Temperature 1 2574
SBE Temperature 2 2631
SBE Conductivity 1 2208
SBE Conductivity 2 2209
WetLabs FLNTU 091
SBE 43 Oxygen 0539
C-Star Transmissometer n/a

Data Processing Description

Data were processed according to suggested post-processing routines outlined in the SeaBird Data Processing manual. Headers for the data processing routines are included in the .cnv files of post-processed data. All data were batch processed by cruise using the same routines and averaged in 0.5m bins. 


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Data Files

File
CTD_DZZ_rs.csv
(Comma Separated Values (.csv), 2.95 MB)
MD5:7c7520d6cc8d1d4d07ab9d0124db6d26
Primary data file for dataset ID 561249

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Parameters

ParameterDescriptionUnits
cruiseCruise Number - first two digits signify year (10 = 2010; 11 = 2011); second two digits signify the sequential number of the cruise in each year Number
stationStation Number; in order occupied (1 = South Station; 2 = North Station; 0 = Scanfish Survey) Number
campaignCampaign Number; in order conducted (1 = Anchor; 2 = Trawl; 0 = Scanfish Survey) Number
campaign_nameCampaign Name; which identifies both the station and the campaign Name
CTD_castConsecutive CTD number from each cruise Number
latNorth Latitude Decimal Degrees
lonWest Longitude Decimal Degrees
yearYear data was collected Year
month_gmtMonth data was collected Month
day_gmtDay data was collected Day
hour_gmtHour data was collected Hour
minute_gmtMinute data was collected Minute
second_gmtSecond data was collected Second
pressPressure in decibars db
tempTemperature in degrees C from sensor 1 C
temp2Temperature in degrees C from sensor 2 C
condConductivity S/m
cond2Conductivity S/m
O2_voltsDissolved oxygen voltage mV
fluorChlorophyll a fluorescence mg/m3
beam_attenBeam attenuation 1/m
beam_transBeam transmission %
altDepth of the altimiter m
O2_mg_LDissolved oxygen concentration in mg/L mg/L
O2_satDissolved oxygen saturation in % % saturation
sigma_tDensity in kg/m3 Kg/m3
depthDepth in saltwater m
temp_diffTemperature difference calculated between different temperature sensors C
salSalinity from sensor 1 PSU
sal2Salinity from sensor 2 PSU
binNumber of scans averaged for this bin of data Number
flagFlagged data n/a
density_diffDensity difference between the primary and secondary sensors. Kg/m3
ISO_DateTime_UTCISO 8601:2004(E) standard for time.  Added to the dataset by the DMO. YYYY-MM-DDTHH:MM:SS.xx


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Instruments

Dataset-specific Instrument Name
CTD
Generic Instrument Name
CTD Sea-Bird 911
Dataset-specific Description
Standard CTD911+ with fluorometer and oxygen sensors working.  
Generic Instrument Description
The Sea-Bird SBE 911 is a type of CTD instrument package. The SBE 911 includes the SBE 9 Underwater Unit and the SBE 11 Deck Unit (for real-time readout using conductive wire) for deployment from a vessel. The combination of the SBE 9 and SBE 11 is called a SBE 911. The SBE 9 uses Sea-Bird's standard modular temperature and conductivity sensors (SBE 3 and SBE 4). The SBE 9 CTD can be configured with auxiliary sensors to measure other parameters including dissolved oxygen, pH, turbidity, fluorescence, light (PAR), light transmission, etc.). More information from Sea-Bird Electronics.

Dataset-specific Instrument Name
Fluorometer
Generic Instrument Name
Fluorometer
Dataset-specific Description
WET Labs ECO-AFL/FL
Generic Instrument Description
A fluorometer or fluorimeter is a device used to measure parameters of fluorescence: its intensity and wavelength distribution of emission spectrum after excitation by a certain spectrum of light. The instrument is designed to measure the amount of stimulated electromagnetic radiation produced by pulses of electromagnetic radiation emitted into a water sample or in situ.

Dataset-specific Instrument Name
Oxygen sensor
Generic Instrument Name
Sea-Bird SBE 43 Dissolved Oxygen Sensor
Dataset-specific Description
SBE 43 Oxygen sensor
Generic Instrument Description
The Sea-Bird SBE 43 dissolved oxygen sensor is a redesign of the Clark polarographic membrane type of dissolved oxygen sensors. more information from Sea-Bird Electronics


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Deployments

HRS100524JP

Website
Platform
R/V Hugh R. Sharp
Report
Start Date
2010-05-24
End Date
2010-06-01
Description
Cruise in Main Channel of Chesapeake Bay

HRS100819JP

Website
Platform
R/V Hugh R. Sharp
Start Date
2010-08-19
End Date
2010-08-26
Description
Cruise in main channel of Chesapeake Bay to collect zooplankton samples.

HRS100920JP

Website
Platform
R/V Hugh R. Sharp
Start Date
2010-09-21
End Date
2010-09-27
Description
One of a series of cruises in the main channel of the Chesapeake Bay to collect gelatinous zooplankton.

HRS110525JP

Website
Platform
R/V Hugh R. Sharp
Start Date
2011-05-24
End Date
2011-06-01
Description
One of six week-long cruises in the main channel of Chesapeake Bay to collect gelatinous zooplankton.

HRS110719JP

Website
Platform
R/V Hugh R. Sharp
Start Date
2011-07-19
End Date
2011-07-26
Description
One of six week-long cruises in the main channel of the Chesapeake Bay to collect gelatinous zooplankton

HRS110922JP

Website
Platform
R/V Hugh R. Sharp
Start Date
2011-09-21
End Date
2011-09-26
Description
One of 6 week-long cruises in the main channel of the Chesapeake Bay, collecting gelatinous zooplankton.


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Project Information

Hypoxia in Marine Ecosystems: Implications for Neritic Copepods (DeZoZoo)


Coverage: Chesapeake Bay


Description from NSF award abstract:
The occurrence of low-oxygen waters, often called "dead zones" in coastal ecosystems throughout the world is increasing. Despite these increases, the pelagic food-web consequences of low-oxygen waters remain poorly understood. Laboratory research has demonstrated that hypoxic water (< 2 mg l-1) can result in mortality, reduced fitness and lower egg production of planktonic copepods, a major link in food webs supporting pelagic fish. Observations in the sea indicate that hypoxic bottom waters usually have depressed abundances of copepods compared to normoxic waters (> 2 mg l-1). The gradient of declining oxygen concentration with respect to depth (oxycline) can be a critical interface in coastal pelagic ecosystems by altering the migratory behavior and depth distribution of copepods and their spatial coherence with potential predators and prey. This project will result in a mechanistic understanding of how behavior and fitness of copepods are affected by hypoxia. The PIs will compare bottom-up and top-down controls on the ecology of copepods in Chesapeake Bay waters experiencing seasonal hypoxia and those that are normoxic.

Specific objectives of this project are to:
1) analyze changes in migratory behavior and fine-scale (meter) distribution of copepods across the oxycline over hourly and diel time scales while simultaneously examining the distribution and abundance of their food (phytoplankton and microzooplankton) and predators (fish, gelatinous zooplankton);
2) estimate effects of hypoxia on the "fitness" of copepods using a suite of measurements (length/weight ratios, feeding, egg production, and egg hatching success) to develop condition indices of copepods captured at different times and depths in hypoxic and normoxic waters; and
3) evaluate effects of hypoxia on copepod mortality by hypoxia-induced, stage-specific copepod mortality in hypoxic bottom waters and by changes in top-down control of copepods from predation by fish and gelatinous zooplankton.

Oxyclines may be a barrier to vertical migration of copepods and thus disruptive to predator avoidance behavior. Faced with increased predation risk from fish and jellyfish, copepods may seek refuge in hypoxic waters for part of the day and/or make short-term vertical excursions between hypoxic and normoxic waters. By regulating vertical migrations, copepods may increase utilization of microzooplankton prey concentrated in the oxycline. Hypoxic waters may elevate consumption of copepods by jellyfish and depress consumption by pelagic fish. This project will evaluate copepod distribution and migration behavior, individual fitness and stage-specific mortality in hypoxic and normoxic waters. It will examine food-web consequences of increased or decreased spatial coherence of copepods and their predators and prey in regions with hypoxic bottom waters and will contribute to fundamental understanding of food-web processes in eutrophic coastal ecosystems.

Project acronym "DeZoZoo" = "Dead Zone Zooplankton"



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Funding

Funding SourceAward
NSF Division of Ocean Sciences (NSF OCE)

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