Dataset: Sand City Ridge Phyto 2010

Name: Thirty day time series of avg daily phytoplankton concentration over ridges in the surf zone at Sand City, Monterey Bay, California in 2010 (Surf zone larval transport project)
Published: 2015-06-29
Keywords: biota, oceans

Cite This Dataset

Spatial Extent: N:36.61576 E:-121.85485 S:36.61576 W:-121.85485

Project:

Does coupling between the inner shelf and surf zone regulate larval supply to intertidal populations? (Surf zone larval transport)

Lead Principal Investigator:

Alan L. Shanks (University of Oregon, OIMB)

Co-Principal Investigator:

Jamie MacMahan (Naval Postgraduate School, NPS)

Steven Morgan (University of California-Davis, UC Davis-BML)

Ad Reniers (Delft University of Technology, TU Delft)

Contact:

Alan L. Shanks (University of Oregon, OIMB)

BCO-DMO Data Manager:

Shannon Rauch (Woods Hole Oceanographic Institution, WHOI BCO-DMO)

Version:

29 June 2015

Version Date:

2015-06-29

Validated:

Yes

Current State:

Final no updates expected

Thirty day time series of avg daily phytoplankton concentration over ridges in the surf zone at Sand City, Monterey Bay, California in 2010 (Surf zone larval transport project)

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Description

Thirty day time series of average daily phytoplankton concentration over ridges in the surf zone at Sand City, CA (36.615760 degrees N, 121.85485 degrees W).

Methods & Sampling

Phytoplankton samples were collected within the Sand City surf zone at about low tide each day. From 06 to 15 July, samples were collected over the shoal within the surf zone just south of the sampled rip current. Within the surf zone, swimmers collected replicate (n=3) 1 L water samples from a depth of about 1 m by filling a sample jar. The investigators assumed that due to the turbulence of the surf zone that there was no vertical stratification of the phytoplankton. Samples were preserved in acid Lugols. Phytoplankton were identified to genus and counted on Sedgwick Rafter slides using standard techniques (Sournia 1978).

Data Processing Description

Three samples were collected each day in the water over the ridges. Counts from the microscopic analysis of the samples were converted to number per liter and the average and 95% confidence interval for each daily set of samples were calculated. On the first two samples dates, only one sample was collected so no 95% confidence interval could be calculated.

BCO-DMO Processing:
- Re-formatted date, and added separate columns for month, day, year, and year-day.
- Added column containing site name.
- Added lat and lon (from metadata form).
- Modified parameter names to conform with BCO-DMO naming conventions.
- Replaced blanks (missing data) with 'nd' to indicate 'no data'.

Data Files

File
SandCity_Ridge_Phyto2010.csv (Comma Separated Values (.csv), 2.27 KB) MD5:1aedaef41cdcadadd7113f3d806d2cbe Primary data file for dataset ID 561352

More Information about this dataset

Funding Sources

Funding Source	Award Number
NSF Division of Ocean Sciences	OCE-0926923

Deployments

Deployment	Synonyms	Start Date	Platform	Investigator
SC_2010		2010-06-15	Sand_City_Surf_Zone	Alan L. Shanks (Principal Investigator)	data info

Instruments

None available yet

Parameters

Date and time formats are described in python strftime() syntax.

Supplied Name	Supplied description	Supplied Units	Standard Name
yrday	Consecutive day of year (Jan 1st = 1)		yrday
Coscinodiscus_95CI	Coscinodiscus 95% confidence interval.	average number per liter	no_bcodmo_term
Thalassiosira_95CI	Thalassiosira 95% confidence interval.	average number per liter	no_bcodmo_term
Total_cells_per_L_95CI	Total cells 95% confidence interval.	average number per liter	no_bcodmo_term
Skeletonema	Skeletonema Ave #/L (mean of the 3 replicate samples).	average number per liter	abundance
Protoperidinium	Protoperidinium Ave #/L (mean of the 3 replicate samples).	average number per liter	abundance
Skeletonema_95CI	Skeletonema 95% confidence interval.	average number per liter	no_bcodmo_term
Protoperidinium_95CI	Protoperidinium 95% confidence interval.	average number per liter	no_bcodmo_term
Guindardia	Guindardia Ave #/L (mean of the 3 replicate samples).	average number per liter	abundance
Odontella	Odontella Ave #/L (mean of the 3 replicate samples).	average number per liter	abundance
Guindardia_95CI	Guindardia 95% confidence interval.	average number per liter	no_bcodmo_term
Odontella_95CI	Odontella 95% confidence interval.	average number per liter	no_bcodmo_term
Asterionellopsis	Asterionellopsis Ave #/L (mean of the 3 replicate samples).	average number per liter	abundance
Prorocentrum_micans	Prorocentrum micans Ave #/L (mean of the 3 replicate samples).	average number per liter	abundance
Asterionellopsis_95CI	Asterionellopsis 95% confidence interval.	average number per liter	no_bcodmo_term
Prorocentrum_micans_95CI	Prorocentrum micans 95% confidence interval.	average number per liter	no_bcodmo_term
PseudoN	PseudoN Ave #/L (mean of the 3 replicate samples).	average number per liter	abundance
Dictyocha	Dictyocha Ave #/L (mean of the 3 replicate samples).	average number per liter	abundance
other_dinos	other dinos Ave #/L (mean of the 3 replicate samples).	average number per liter	abundance
PseudoN_95CI	PseudoN 95% confidence interval.	average number per liter	no_bcodmo_term
Dictyocha_95CI	Dictyocha 95% confidence interval.	average number per liter	no_bcodmo_term
other_dinos_95CI	other dinos 95% confidence interval.	average number per liter	no_bcodmo_term
Chaetoceros	Chaetoceros Ave #/L (mean of the 3 replicate samples).	average number per liter	abundance
Stephanopyxis	Stephanopyxis Ave #/L (mean of the 3 replicate samples).	average number per liter	abundance
Corenthron	Corenthron Ave #/L (mean of the 3 replicate samples).	average number per liter	abundance
Chaetoceros_95CI	Chaetoceros 95% confidence interval.	average number per liter	no_bcodmo_term
Stephanopyxis_95CI	Stephanopyxis 95% confidence interval.	average number per liter	no_bcodmo_term
Corenthron_95CI	Corenthron 95% confidence interval.	average number per liter	no_bcodmo_term
Eucampia	Eucampia Ave #/L (mean of the 3 replicate samples).	average number per liter	abundance
Dissondium	Dissondium Ave #/L (mean of the 3 replicate samples).	average number per liter	abundance
Lauderia	Lauderia Ave #/L (mean of the 3 replicate samples).	average number per liter	abundance
Eucampia_95CI	Eucampia 95% confidence interval.	average number per liter	no_bcodmo_term
Dissondium_95CI	Dissondium 95% confidence interval.	average number per liter	no_bcodmo_term
Lauderia_95CI	Lauderia 95% confidence interval.	average number per liter	no_bcodmo_term
Thalassionema	Thalassionema Ave #/L (mean of the 3 replicate samples).	average number per liter	abundance
Ditylum	Ditylum Ave #/L (mean of the 3 replicate samples).	average number per liter	abundance
Phaeocystis	PhaeocystisAve #/L (mean of the 3 replicate samples).	average number per liter	abundance
Thalassionema_95CI	Thalassionema 95% confidence interval.	average number per liter	no_bcodmo_term
Ditylum_95CI	Ditylum 95% confidence interval.	average number per liter	no_bcodmo_term
Phaeocystis_95CI	Phaeocystis 95% confidence interval.	average number per liter	no_bcodmo_term
Coscinodiscus	Coscinodiscus Ave #/L (mean of the 3 replicate samples).	average number per liter	abundance
Thalassiosira	Thalassiosira Ave #/L (mean of the 3 replicate samples).	average number per liter	abundance
Total_cells_per_L	Total cells Ave #/L (mean of the 3 replicate samples).	average number per liter	abundance
day	2-digit day of month.	dd (01 to 31)	day
lat	Latitude of the sampling site.	decimal degrees	lat
lon	Longitude of the sampling site.	decimal degrees	lon
mon	2-digit month of year.	mm (01 to 12)	month
date	Month/day/year of sample collection.	mm/dd/yyyy	date
site_name	Name of the sampling site.	text	site
year	4-digit year.	YYYY	year

Database

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Dataset: Sand City Ridge Phyto 2010