http://lod.bco-dmo.org/id/dataset/561791
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2015-06-30
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
Time series of avg daily phytoplankton concentration at the rocky shore next to Carmel River State Beach, Carmel Bay California in 2011 (Surf zone larval transport project)
2015-06-30
publication
2015-06-30
revision
BCO-DMO Linked Data URI
2015-06-30
creation
http://lod.bco-dmo.org/id/dataset/561791
Alan L. Shanks
University of Oregon
principalInvestigator
Jamie MacMahan
Naval Postgraduate School
principalInvestigator
Steven Morgan
University of California-Davis
principalInvestigator
Ad Reniers
Delft University of Technology
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Shanks, A. L., MacMahan, J., Morgan, S., Reniers, A. (2015) Time series of avg daily phytoplankton concentration at the rocky shore next to Carmel River State Beach, Carmel Bay California in 2011 (Surf zone larval transport project). Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 30 June 2015) Version Date 2015-06-30 [if applicable, indicate subset used]. http://lod.bco-dmo.org/id/dataset/561791 [access date]
Time series of avg daily phyto concentration at the rocky shore next to Carmel River State Beach, CA. Dataset Description: <p>Time series of average daily phytoplankton concentration at the rocky shore next to Carmel River State Beach, CA (36.53833 degrees N, 121.92861 degrees W).</p>
<p><strong>Related references:</strong><br />
Shanks, A.L., S. G. Morgan, J. MacMahan, Ad J.H.M Reniers, M. Jarvis, J. Brown, and C. Griesemer (2014). Onshore transport of plankton by internal tides and upwelling-relaxation events. Marine Ecology Progress Series. DOI:<a href="http://dx.doi.org/10.3354/meps10717" target="_blank">10.3354/meps10717</a></p>
<p>Shanks, A.L., S. G. Morgan, J. MacMahan, Ad J.H.M Reniers, M. Jarvis, J. Brown, and C. Griesemer (2015). Transport of Larvae and Detritus Across the Surf Zone of a Steep Reflective Pocket Beach. Marine Ecology Progress Series. DOI:<a href="http://dx.doi.org/10.3354/meps11223" target="_blank">10.3354/meps11223</a></p> Methods and Sampling: <p>Daily phytoplankton samples were collected between 15 June to 15 July, 2011 within the surf zone at the rocky shores just north and south of Carmel River State Beach.&nbsp; At these sites, three replicate 1 L samples were collected with a well bailer cast with a fishing pole into the surf zone. Samples were collected close to low tide. Samples were preserved in acid Lugols. Phytoplankton were identified to genus and counted on Sedgwick Rafter slides using standard techniques (Sournia 1978).</p>
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-0926923 Award URL: http://www.nsf.gov/awardsearch/showAward?AWD_ID=0926923
completed
Alan L. Shanks
University of Oregon
541-888-2581 x277
Oregon Institute of Marine Biology P.O. Box 5389
Charleston
OR
97420
USA
ashanks@uoregon.edu
pointOfContact
Jamie MacMahan
Naval Postgraduate School
831-656-2397
Oceanography Department 833 Dyer Rd
Monterey
CA
93943
USA
jhmacmah@nps.edu
pointOfContact
Steven Morgan
University of California-Davis
707-875-1920
Bodega Marine Laboratory P.O. Box 247
Bodega Bay
CA
94923
USA
pointOfContact
Ad Reniers
Delft University of Technology
Civil Engineering and Geosciences, Department of Hydraulic Engineering Stevinweg 1
Delft
2628CN
The Netherlands
a.j.h.m.reniers@gmail.com
pointOfContact
asNeeded
Dataset Version: 30 June 2015
Unknown
site_name
lat
lon
date
PseudoN
PseudoN_95CI
Chaetoceros
Chaetoceros_95CI
Thalassionema
Thalassionema_95CI
Skeletonema
Skeletonema_95CI
Thalassiosira
Thalassiosira_95CI
mon
day
year
yrday
Pennate
Pennate_95CI
Rhizoselenia
Rhizoselenia_95CI
theme
None, User defined
site
latitude
longitude
date
abundance
No BCO-DMO term
month of year
day of month
year
year day
featureType
BCO-DMO Standard Parameters
CRSB_2011
service
Deployment Activity
Carmel River State Beach, Carmel Bay California
place
Locations
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
Does coupling between the inner shelf and surf zone regulate larval supply to intertidal populations?
https://www.bco-dmo.org/project/506187
Does coupling between the inner shelf and surf zone regulate larval supply to intertidal populations?
<p><em>Description from NSF award abstract:</em><br />
Many intertidal invertebrates and fishes have complex life cycles that include a planktonic larval phase. At the end of their pelagic development, larvae must return to shore and cross the surf zone. The purpose of this study is to investigate for the first time the role of surf zone hydrodynamics in the rate of delivery of cyprids of intertidal barnacles to the shore. To exploit the greater physical oceanographic understanding of the hydrodynamics of sandy beach surf zones, this initial study will focus on cyprid settlement on hard substrates in surf zones associated with sandy beaches. In the first two years of the study, the investigators will carry out an intensive two-month physical and biological study of a reflective and dissipative surf zone, respectively. At each site they will sample cyprids in the waters of the inner-shelf, just outside the surf zone, and within the surf zone and they will measure settlement on plates in the intertidal zone. At the same time they will collect physical oceanographic data with both in-situ instruments and a fleet of GPS-equipped surface drifters to describe the hydrodynamics of the surf zone. The time series of the physical and biological data will be correlated to investigate mechanisms of delivery of cyprids to the shore. To simulate the hydrodynamic processes responsible for the transport of larvae, the investigators will use a 3D model, resolving both the horizontal and vertical structure of the unsteady nearshore flow. To evaluate potential transport of larvae through the surf zone, a biological module describing the spatial distribution of the larvae will be coupled to the hydrodynamic module to predict the pathways of the larvae and compare with observations. Intensive sampling will help provide insight into the actual processes transporting cyprids from the inner shelf, through the surf zone, and to the intertidal zone. During each summer, weekly barnacle recruitment and daily cyprid settlement will be measured for two months to settlement plates at reflective and dissipative beaches in central California and southern Oregon. Population densities at many beaches along the West Coast will be surveyed each year to determine if a latitudinal gradient in wave energy is correlated with adult barnacle population densities.</p>
<p>Because the fundamentals of surfzone dynamics are universal, results of this research will be broadly applicable not only along the West Coast, but worldwide. This project will have significant impacts on education and public outreach. It will support three graduate students and nine undergraduate students and will create new research opportunities for students of diverse backgrounds from three undergraduate institutions, local high schools and the public. The research will be included in the curriculum of intensive hands-on courses, and undergraduates will participate in the research while learning how a real-world research project addresses fundamental questions. Both a website that highlights findings and an interactive display for visitors to the Bodega Marine Laboratory will be developed. A model coupling nearshore hydrodynamics and onshore transport across the surf zone will be made available to the community to stimulate research into this emerging research topic.</p>
Surf zone larval transport
largerWorkCitation
project
eng; USA
biota
oceans
Carmel River State Beach, Carmel Bay California
2015-06-30
Sand City Beach and Carmel River State Beach, Monterey Bay, CA
0
BCO-DMO catalogue of parameters from Time series of avg daily phytoplankton concentration at the rocky shore next to Carmel River State Beach, Carmel Bay California in 2011 (Surf zone larval transport project)
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/561801.rdf
Name: site_name
Units: text
Description: Name of the sampling site.
http://lod.bco-dmo.org/id/dataset-parameter/561802.rdf
Name: lat
Units: decimal degrees
Description: Latitude of the sampling site.
http://lod.bco-dmo.org/id/dataset-parameter/561803.rdf
Name: lon
Units: decimal degrees
Description: Longitude of the sampling site.
http://lod.bco-dmo.org/id/dataset-parameter/561804.rdf
Name: date
Units: mm/dd/yyyy
Description: Month/day/year of sample collection.
http://lod.bco-dmo.org/id/dataset-parameter/561805.rdf
Name: PseudoN
Units: average number per liter
Description: PseudoN Ave #/L (mean of the 3 replicate samples).
http://lod.bco-dmo.org/id/dataset-parameter/561806.rdf
Name: PseudoN_95CI
Units: average number per liter
Description: PseudoN 95% confidence interval.
http://lod.bco-dmo.org/id/dataset-parameter/561807.rdf
Name: Chaetoceros
Units: average number per liter
Description: Chaetoceros Ave #/L (mean of the 3 replicate samples).
http://lod.bco-dmo.org/id/dataset-parameter/561808.rdf
Name: Chaetoceros_95CI
Units: average number per liter
Description: Chaetoceros 95% confidence interval.
http://lod.bco-dmo.org/id/dataset-parameter/561809.rdf
Name: Thalassionema
Units: average number per liter
Description: Thalassionema Ave #/L (mean of the 3 replicate samples).
http://lod.bco-dmo.org/id/dataset-parameter/561810.rdf
Name: Thalassionema_95CI
Units: average number per liter
Description: Thalassionema 95% confidence interval.
http://lod.bco-dmo.org/id/dataset-parameter/561811.rdf
Name: Skeletonema
Units: average number per liter
Description: Skeletonema Ave #/L (mean of the 3 replicate samples).
http://lod.bco-dmo.org/id/dataset-parameter/561812.rdf
Name: Skeletonema_95CI
Units: average number per liter
Description: Skeletonema 95% confidence interval.
http://lod.bco-dmo.org/id/dataset-parameter/561813.rdf
Name: Thalassiosira
Units: average number per liter
Description: Thalassiosira Ave #/L (mean of the 3 replicate samples).
http://lod.bco-dmo.org/id/dataset-parameter/561814.rdf
Name: Thalassiosira_95CI
Units: average number per liter
Description: Thalassiosira 95% confidence interval.
http://lod.bco-dmo.org/id/dataset-parameter/561815.rdf
Name: mon
Units: mm (01 to 12)
Description: 2-digit month of year.
http://lod.bco-dmo.org/id/dataset-parameter/561816.rdf
Name: day
Units: dd (01 to 31)
Description: 2-digit day of month.
http://lod.bco-dmo.org/id/dataset-parameter/561817.rdf
Name: year
Units: YYYY
Description: 4-digit year.
http://lod.bco-dmo.org/id/dataset-parameter/561818.rdf
Name: yrday
Units: dimensionless
Description: Consecutive day of year (Jan 1st = 1)
http://lod.bco-dmo.org/id/dataset-parameter/561819.rdf
Name: Pennate
Units: average number per liter
Description: Pennate Ave #/L (mean of the 3 replicate samples).
http://lod.bco-dmo.org/id/dataset-parameter/561820.rdf
Name: Pennate_95CI
Units: average number per liter
Description: Pennate 95% confidence interval.
http://lod.bco-dmo.org/id/dataset-parameter/561821.rdf
Name: Rhizoselenia
Units: average number per liter
Description: Rhizoselenia Ave #/L (mean of the 3 replicate samples).
http://lod.bco-dmo.org/id/dataset-parameter/561822.rdf
Name: Rhizoselenia_95CI
Units: average number per liter
Description: Rhizoselenia 95% confidence interval.
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
6135
https://datadocs.bco-dmo.org/file/933jzlvukZKP89/CarmelRiver_RockyShore_Phyto2011.csv
CarmelRiver_RockyShore_Phyto2011.csv
Primary data file for dataset ID 561791
download
https://www.bco-dmo.org/dataset/561791/data/download
download
onLine
dataset
<p>Daily phytoplankton samples were collected between 15 June to 15 July, 2011 within the surf zone at the rocky shores just north and south of Carmel River State Beach.&nbsp; At these sites, three replicate 1 L samples were collected with a well bailer cast with a fishing pole into the surf zone. Samples were collected close to low tide. Samples were preserved in acid Lugols. Phytoplankton were identified to genus and counted on Sedgwick Rafter slides using standard techniques (Sournia 1978).</p>
Specified by the Principal Investigator(s)
<p>Three samples were collected each day. Counts from the microscopic analysis of the samples were converted to number per liter and the average and 95% confidence interval for each daily set of samples were calculated.</p>
<p>BCO-DMO Processing:<br />
- Re-formatted date, and added separate columns for month, day, year, and year-day.<br />
- Added column containing site name.<br />
- Added lat and lon (from metadata form).<br />
- Modified parameter names to conform with BCO-DMO naming conventions.</p>
Specified by the Principal Investigator(s)
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
Deployment: CRSB_2011
CRSB_2011
Carmel_River_State_Beach
shoreside
CRSB_2011
Alan L. Shanks
University of Oregon
Carmel_River_State_Beach
shoreside