http://lod.bco-dmo.org/id/dataset/563054
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2015-07-28
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
XBT data from SEEPC cruises collected on the R/V Oceanus (OC471-02), R/V Atlantis (AT26-15, AT21-02, AT29-04), R/V Cape Hatteras (CH0912), and R/V Endeavor (EN531) from 2011-2015 (SEEPC project)
2015-12-01
publication
2015-12-01
revision
BCO-DMO Linked Data URI
2015-12-01
creation
http://lod.bco-dmo.org/id/dataset/563054
Cindy Van Dover
Duke University
principalInvestigator
David B. Eggleston
North Carolina State University - Marine, Earth and Atmospheric Sciences
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Van Dover, C., Eggleston, D. B. (2015) XBT data from SEEPC cruises collected on the R/V Oceanus (OC471-02), R/V Atlantis (AT26-15, AT21-02, AT29-04), R/V Cape Hatteras (CH0912), and R/V Endeavor (EN531) from 2011-2015 (SEEPC project). Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 2) Version Date 2015-12-01 [if applicable, indicate subset used]. http://lod.bco-dmo.org/id/dataset/563054 [access date]
XBT data from SEEPC cruises Dataset Description: <p>SEEPC XBT data (depth, temperature, sound velocity).</p> Methods and Sampling: <p>XBTs were deployed over a spatial spacing, dependent on the number of ACMs per transect available. 10nm spacing was desired where possible while underway.</p>
<p><strong>Probe information:</strong></p>
<p><strong>OC471-02:</strong><br />
Probe Type : T-7<br />
Terminal Depth : 760 m<br />
Depth Equation : Standard<br />
Depth Coeff. 1 : 0.0<br />
Depth Coeff. 2 : 6.472<br />
Depth Coeff. 3 : -0.00216<br />
Depth Coeff. 4 : 0.0<br />
Pressure Pt Correction: 100.0%<br />
all casts: Sound velocity derived with assumed salinity: 34.50 ppt</p>
<p><strong>AT21-02:</strong><br />
Probe Type : T-6<br />
Terminal Depth : 460 m<br />
Depth Equation : Standard<br />
Depth Coeff. 1 : 0.0<br />
Depth Coeff. 2 : 6.472<br />
Depth Coeff. 3 : -0.00216<br />
Depth Coeff. 4 : 0.0<br />
Pressure Pt Correction: 100.0%<br />
Sound velocity derived with assumed salinity:<br />
T6_00002.EDF: 35.10 ppt<br />
T6_00003.EDF: 35.09 ppt<br />
T6_00004.EDF: 35.09 ppt<br />
T6_00005.EDF: 34.45 ppt<br />
T6_00006.EDF: 34.43 ppt<br />
T6_00007.EDF: 33.98 ppt<br />
T6_00008.EDF: 34.17 ppt<br />
T6_00009.EDF: 34.30 ppt<br />
T6_00010.EDF: 34.58 ppt<br />
T6_00011.EDF: 34.54 ppt<br />
T6_00012.EDF: 33.47 ppt<br />
T6_00013.EDF: 33.30 ppt<br />
T6_00014.EDF: 33.30 ppt<br />
T6_00015.EDF: 33.10 ppt<br />
T6_00016.EDF: 33.10 ppt<br />
T6_00017.EDF: 32.80 ppt</p>
<p><strong>CH0912:</strong><br />
Probe Type : T-6<br />
Terminal Depth : 460 m<br />
Depth Equation : Standard<br />
Depth Coeff. 1 : 0.0<br />
Depth Coeff. 2 : 6.691<br />
Depth Coeff. 3 : -0.00225<br />
Depth Coeff. 4 : 0.0<br />
Pressure Pt Correction: 100.0%<br />
all casts: Salinity : 30.00 ppt</p>
<p><strong>AT26-15:</strong><br />
Probe Type : T-7<br />
Terminal Depth : 760 m<br />
Depth Equation : Standard<br />
Depth Coeff. 1 : 0.0<br />
Depth Coeff. 2 : 6.472<br />
Depth Coeff. 3 : -0.00216<br />
Depth Coeff. 4 : 0.0<br />
Pressure Pt Correction: 100.0%<br />
all casts: Sound velocity derived with assumed salinity: 35.00 ppt</p>
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1029841 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1029841
onGoing
Cindy Van Dover
Duke University
252-504-7655
135 Duke Marine Lab Rd.
Beaufort
NC
28516
USA
clv3@duke.edu
pointOfContact
David B. Eggleston
North Carolina State University - Marine, Earth and Atmospheric Sciences
919-515-7840
32800 Faucette Drive PO Box 8208
Raleigh
NC
27695
USA
eggleston@ncsu.edu
pointOfContact
asNeeded
Dataset Version: 2
Unknown
cruise_id
year
date
time
ISO_DateTime_UTC
yrday_utc
lat
lon
Xseq
depth_xbt
temp_xbt
snd_vel
XBT
theme
None, User defined
Cruise identfier
year
date
time of day
ISO_DateTime_UTC
UTC day of year and decimal time
latitude
longitude
cast
depth
water temperature at measurement depth
sound velocity
featureType
BCO-DMO Standard Parameters
Expendable Bathythermograph
instrument
BCO-DMO Standard Instruments
OC471-02
AT26-15
AT21-02
CH0912
EN531
AT29-04
service
Deployment Activity
Blake Ridge, Cape Fear Diapir
Gulf of Mexico
Barbados seeps, Intra-American Sea
Blake Ridge Diapir, Cape Fear Diapir, and United States Western Atlantic Margin
place
Locations
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
Connectivity in western Atlantic seep populations: Oceanographic and life-history processes underlying genetic structure
https://osprey.bco-dmo.org/project/2270
Connectivity in western Atlantic seep populations: Oceanographic and life-history processes underlying genetic structure
<p>This project will evaluate connectivity on spatial scales that match those at which vent systems are being studied (3500 km), with a set of nested seeps (within the Barbados system) within which connectivity can be explored at more local spatial scales (30 to 130 km), and with species that span depth (600 m to 3600 m) and geographic ranges (30 km to 3500 km) and that have diverse life-history characteristics. Five deep-sea seep systems in the Intra- American Sea (IAS) are targeted: Blake Ridge, Florida Escarpment, Alaminos Canyon, Brine Pool, Barbados (El Pilar, Orenoque A, Orenoque B). The primary objective is to advance our general knowledge of connectivity in the deep sea. The focus is on species and processes occurring in the IAS, with attention to oceanographic circulation, life histories, and genetics. Questions that apply in shallow-water systems motivate this study:</p>
<p>1. What phylogeographic breaks occur in the system? It is important to distinguish between phylogeographic history and connectivity. A phylogeographic break with no shared alleles between populations implies a long history of isolation or possibly cryptic speciation.</p>
<p>2. Are populations connected by ongoing migration? This is the fundamental question about connectivity and the scale of genetic variation in marine species with planktonic larvae.</p>
<p>3. What biophysical processes underlie observed connectivities? Biological processes (e.g., larval distributions in the water column, timing of reproduction, and planktonic larval duration) and physical processes of transport and dispersion interact to determine connectivity.</p>
<p>The oceanographic model for the IAS will be improved and coupled to a Lagrangian larval transport model. The field program includes time-series sampling of larvae at seeps with records of current velocities, water column sampling to determine larval distribution potential, shipboard studies of larval biology and behavior, and sampling of benthic target species. Phylogenetic and population genetic tools will be used to explore historical and contemporary gene flow. Iterative interactions among the science teams will advance our understanding of connectivity in the deep sea and to develop effective and best methods for hypothesis testing under the constraints of working in a relatively inaccessible environment. Since their discovery, deep-sea chemosynthetic ecosystems have been novel systems within which to test the generality of paradigms developed for shallow-water species. This study will explore scale-dependent biodiversity and recruitment dynamics in deep-sea seep communities, and will identify key factors underlying population persistence and maintenance of biodiversity in these patchy systems.</p>
<p><a href="http://dmoserv3.bco-dmo.org/data_docs/SEEPC/AT29-04_Zambon_map.kmz" target="_blank">Google Earth map</a> showing positions of stations, CTD, XBT, multibeam locations (KMZ file dlownload)</p>
SEEPC
largerWorkCitation
project
eng; USA
oceans
Blake Ridge, Cape Fear Diapir; Gulf of Mexico; Barbados seeps, Intra-American Sea; Blake Ridge Diapir, Cape Fear Diapir, and United States Western Atlantic Margin
2015-12-01
Western Atlantic, Gulf of Mexico, Intra-American Sea
0
BCO-DMO catalogue of parameters from XBT data from SEEPC cruises collected on the R/V Oceanus (OC471-02), R/V Atlantis (AT26-15, AT21-02, AT29-04), R/V Cape Hatteras (CH0912), and R/V Endeavor (EN531) from 2011-2015 (SEEPC project)
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/563113.rdf
Name: cruise_id
Units: unitless
Description: <p>cruise identification</p>
http://lod.bco-dmo.org/id/dataset-parameter/563114.rdf
Name: year
Units: YYYY
Description: <p>year</p>
http://lod.bco-dmo.org/id/dataset-parameter/563115.rdf
Name: date
Units: YYYYMMDD
Description: <p>date</p>
http://lod.bco-dmo.org/id/dataset-parameter/563116.rdf
Name: time
Units: HHMM
Description: <p>time</p>
http://lod.bco-dmo.org/id/dataset-parameter/563117.rdf
Name: ISO_DateTime_UTC
Units: YYYY-mm-ddTHH:MM:SS[.xx]Z (UTC time)
Description: <p>Date/Time (UTC) ISO formatted based on ISO 8601:2004(E)</p>
http://lod.bco-dmo.org/id/dataset-parameter/563118.rdf
Name: yrday_utc
Units: unitless
Description: <p>UTC day and decimal time; as 326.5 for the 326th day of the year or November 22 at 1200 hours (noon)</p>
http://lod.bco-dmo.org/id/dataset-parameter/563119.rdf
Name: lat
Units: decimal degrees
Description: <p>latitude; negative denotes South</p>
http://lod.bco-dmo.org/id/dataset-parameter/563120.rdf
Name: lon
Units: decimal degrees
Description: <p>longitude; negative denotes West</p>
http://lod.bco-dmo.org/id/dataset-parameter/563121.rdf
Name: Xseq
Units: integer
Description: <p>XBT Sequence Number</p>
http://lod.bco-dmo.org/id/dataset-parameter/563122.rdf
Name: depth_xbt
Units: meters
Description: <p>XBT depth</p>
http://lod.bco-dmo.org/id/dataset-parameter/563123.rdf
Name: temp_xbt
Units: degrees celsius
Description: <p>XBT temperature</p>
http://lod.bco-dmo.org/id/dataset-parameter/563124.rdf
Name: snd_vel
Units: meters/second
Description: <p>sound velocity</p>
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
21304438
https://datadocs.bco-dmo.org/file/6YYMwgJhMLwKkW/SEEPC_XBT.csv
SEEPC_XBT.csv
Primary data file for dataset ID 563054
download
https://osprey.bco-dmo.org/dataset/563054/data/download
download
onLine
dataset
<p>XBTs were deployed over a spatial spacing, dependent on the number of ACMs per transect available. 10nm spacing was desired where possible while underway.</p>
<p><strong>Probe information:</strong></p>
<p><strong>OC471-02:</strong><br />
Probe Type : T-7<br />
Terminal Depth : 760 m<br />
Depth Equation : Standard<br />
Depth Coeff. 1 : 0.0<br />
Depth Coeff. 2 : 6.472<br />
Depth Coeff. 3 : -0.00216<br />
Depth Coeff. 4 : 0.0<br />
Pressure Pt Correction: 100.0%<br />
all casts: Sound velocity derived with assumed salinity: 34.50 ppt</p>
<p><strong>AT21-02:</strong><br />
Probe Type : T-6<br />
Terminal Depth : 460 m<br />
Depth Equation : Standard<br />
Depth Coeff. 1 : 0.0<br />
Depth Coeff. 2 : 6.472<br />
Depth Coeff. 3 : -0.00216<br />
Depth Coeff. 4 : 0.0<br />
Pressure Pt Correction: 100.0%<br />
Sound velocity derived with assumed salinity:<br />
T6_00002.EDF: 35.10 ppt<br />
T6_00003.EDF: 35.09 ppt<br />
T6_00004.EDF: 35.09 ppt<br />
T6_00005.EDF: 34.45 ppt<br />
T6_00006.EDF: 34.43 ppt<br />
T6_00007.EDF: 33.98 ppt<br />
T6_00008.EDF: 34.17 ppt<br />
T6_00009.EDF: 34.30 ppt<br />
T6_00010.EDF: 34.58 ppt<br />
T6_00011.EDF: 34.54 ppt<br />
T6_00012.EDF: 33.47 ppt<br />
T6_00013.EDF: 33.30 ppt<br />
T6_00014.EDF: 33.30 ppt<br />
T6_00015.EDF: 33.10 ppt<br />
T6_00016.EDF: 33.10 ppt<br />
T6_00017.EDF: 32.80 ppt</p>
<p><strong>CH0912:</strong><br />
Probe Type : T-6<br />
Terminal Depth : 460 m<br />
Depth Equation : Standard<br />
Depth Coeff. 1 : 0.0<br />
Depth Coeff. 2 : 6.691<br />
Depth Coeff. 3 : -0.00225<br />
Depth Coeff. 4 : 0.0<br />
Pressure Pt Correction: 100.0%<br />
all casts: Salinity : 30.00 ppt</p>
<p><strong>AT26-15:</strong><br />
Probe Type : T-7<br />
Terminal Depth : 760 m<br />
Depth Equation : Standard<br />
Depth Coeff. 1 : 0.0<br />
Depth Coeff. 2 : 6.472<br />
Depth Coeff. 3 : -0.00216<br />
Depth Coeff. 4 : 0.0<br />
Pressure Pt Correction: 100.0%<br />
all casts: Sound velocity derived with assumed salinity: 35.00 ppt</p>
Specified by the Principal Investigator(s)
<p>The data has been minimally processed. Low-level data processing was completed, mainly to convert binary data to CSV. The originally submitted *.EDF files are text files, produced when the data were collected and have not had any further processing.</p>
<p><strong>BCO-DMO Processing:</strong></p>
<p>- added conventional header with dataset name, PI name, version date<br />
- used script EDF2xbt.pl to remove&nbsp;original headers and add parameter names<br />
- parameter names modified to conform to BCO-DMO convention<br />
- date reformatted to YYYYMMDD<br />
- added cruise_id and year columns</p>
Specified by the Principal Investigator(s)
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
XBT
XBT
PI Supplied Instrument Name: XBT PI Supplied Instrument Description:Lockheed Martin Sippican T6 model XBT Instrument Name: Expendable Bathythermograph Instrument Short Name:XBT Instrument Description: An XBT is an expendable free-fall temperature probe that provides a profile of measured temperature against depth calculated from a fall-rate model. For example, two popular XBT models are the T-5 and T-7 probes from Sippican. More information is available from Lockheed Martin Sippican at URL: http://www.sippican.com/. Community Standard Description: http://vocab.nerc.ac.uk/collection/L05/current/132/
Cruise: OC471-02
OC471-02
R/V Oceanus
Community Standard Description
International Council for the Exploration of the Sea
R/V Oceanus
vessel
OC471-02
Cindy Van Dover
Duke University
http://dmoserv3.whoi.edu/data_docs/SEEPC/OC471-02_cruise_report.pdf
Report describing OC471-02
Cruise: AT26-15
AT26-15
R/V Atlantis
Community Standard Description
International Council for the Exploration of the Sea
R/V Atlantis
vessel
AT26-15
Cindy Van Dover
Duke University
Cruise: AT21-02
AT21-02
R/V Atlantis
Community Standard Description
International Council for the Exploration of the Sea
R/V Atlantis
vessel
AT21-02
Cindy Van Dover
Duke University
http://dmoserv3.whoi.edu/data_docs/SEEPC/AT21-02_CruiseREPORT.pdf
Report describing AT21-02
Cruise: CH0912
CH0912
R/V Cape Hatteras
Community Standard Description
International Council for the Exploration of the Sea
R/V Cape Hatteras
vessel
CH0912
David B. Eggleston
North Carolina State University - Marine, Earth and Atmospheric Sciences
http://dmoserv3.whoi.edu/data_docs/SEEPC/CH0912_cruise_report.pdf
Report describing CH0912
Cruise: EN531
EN531
R/V Endeavor
Community Standard Description
International Council for the Exploration of the Sea
R/V Endeavor
vessel
EN531
Ruoying He
North Carolina State University - Marine, Earth and Atmospheric Sciences
http://dmoserv3.whoi.edu/data_docs/SEEPC/Cruise.Report.EN531-08-14.2013.pdf
Report describing EN531
Cruise: AT29-04
AT29-04
R/V Atlantis
Community Standard Description
International Council for the Exploration of the Sea
R/V Atlantis
vessel
AT29-04
Cindy Van Dover
Duke University
http://dmoserv3.whoi.edu/data_docs/SEEPC/AT29-04_SeepC_cruise_report.pdf
Report describing AT29-04
R/V Oceanus
Community Standard Description
International Council for the Exploration of the Sea
R/V Oceanus
vessel
R/V Atlantis
Community Standard Description
International Council for the Exploration of the Sea
R/V Atlantis
vessel
R/V Cape Hatteras
Community Standard Description
International Council for the Exploration of the Sea
R/V Cape Hatteras
vessel
R/V Endeavor
Community Standard Description
International Council for the Exploration of the Sea
R/V Endeavor
vessel