<div><p>Phage DNA was submitted to the Broad Institute and sequenced under the Gordon and Betty Moore Foundation’s Marine Phage, Virus, and Virome Sequencing Project. The Broad Institute sequencing data were assembled using the Lasergene SeqMan Pro. The assemblies resulted in the generation of single contigs for each phage genome.</p>
<p>The genome of Sulfitobacter sp. strain CB2047was sequenced using Illumina technology with an average sequencing coverage of approximately 600 x. The genome was assembled into 12 contigs, ranging in size from 18 kb to 2.3 Mb, using CLC Assembly Cell (CLC bio, Cambridge, MA, USA). The genome of CB2047 was annotated using the NCBI Prokaryotic Genome Annotation Pipeline (<a href="http://www.ncbi.nlm">http://www.ncbi.nlm</a> .nih.gov/genome/annotation_prok/) and the KAAS genome annotation and pathway reconstruction server. </p></div>
Sulfitobacter phage accessions
<div><p><strong>Related Reference:</strong> Ankrah, N. Y. D., A. L. May, J. L., Middleton, D. R. Jones, M. Hadden, J. R. Gooding, G. R. LeCleir, S. W. Wilhelm, S. R. Campagna and A. Buchan. (2014 Phage infection of an environmentally relevant marine bacterium alters host metabolism and lysate composition. International Society for Microbial Ecology Journal (2014) 8, 1089-1100; doi:10.1038/ismej.2013.216; published online 5 December 2013</p>
<p>See also, <a href="http://dmoserv3.bco-dmo.org/data_docs/Roseophage_Model/Ankrah_Supplemental_Buchan.pdf" target="_blank">Supplemental Material (PDF)</a></p></div>
Sulfitobacter phage accessions
<div><p><strong>BCO-DMO Processing:</strong><br />
- added conventional header with dataset name, PI name, version date<br />
- created a BCO-DMO servable table of accessions and associated metadata obtained from the GenBank source information.</p></div>
654170
Sulfitobacter phage accessions
2016-08-16T13:15:55-04:00
2016-08-16T13:15:55-04:00
2023-07-07T16:10:26-04:00
urn:bcodmo:dataset:654170
Roseobacter isolate Sulfitobacter sp. CB2047 and three of its infecting phage accessions at NCBI GenBank
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Buchan, A., Campagna, S. R., Wilhelm, S. W. (2016) Roseobacter isolate Sulfitobacter sp. CB2047 and three of its infecting phage accessions at NCBI GenBank. Biological and Chemical Oceanography Data Management Office (BCO-DMO). Version Date 2016-09-06 [if applicable, indicate subset used]. http://lod.bco-dmo.org/id/dataset/654170 [access date]
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2016-09-06
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