http://lod.bco-dmo.org/id/dataset/655604
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2016-08-24
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
Ciona intestinalis, Mercenaria mercenaria and Mya arenaria size data from specimens used in stereoscopic particle image velocimetry (PIV) experiments (Inhalant flows project)
2016-08-25
publication
2016-08-25
revision
BCO-DMO Linked Data URI
2016-08-25
creation
http://lod.bco-dmo.org/id/dataset/655604
Dr Peter Jumars
University of Maine
principalInvestigator
Dr John Crimaldi
University of Colorado
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Jumars, P., Crimaldi, J. (2016) Ciona intestinalis, Mercenaria mercenaria and Mya arenaria size data from specimens used in stereoscopic particle image velocimetry (PIV) experiments (Inhalant flows project). Biological and Chemical Oceanography Data Management Office (BCO-DMO). Version Date 2016-08-25 [if applicable, indicate subset used]. http://lod.bco-dmo.org/id/dataset/655604 [access date]
Ciona intestinalis, Mercenaria mercenaria and Mya arenaria size data from specimens used in PIV experiments Dataset Description: <p>Measurements of the individuals used in the stereoscopic particle image velocimetry (PIV) experiments, including inhalant and exhalant siphon size, body length, wet and dry weight, and ash free dry weight.</p>
<p><strong>Related Dataset:</strong> <a href="http://www.bco-dmo.org/dataset/655656">Suspension feeder PIV data</a></p> Methods and Sampling:
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1260199 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1260199
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1260232 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1260232
completed
Dr Peter Jumars
University of Maine
207-563-8101
193 Clark's Cove Road
Walpole
ME
04573-3307
USA
jumars@maine.edu
pointOfContact
Dr John Crimaldi
University of Colorado
303-735-2162
428 UCB, University of Colorado
Boulder
CO
80309-0428
USA
crimaldi@colorado.edu
pointOfContact
asNeeded
Unknown
species
experiment
date
inh_siphon_d1
inh_siphon_d2
no_name
inh_siphon_area
inh_siphon_ECD
exh_siphon_d1
exh_siphon_d2
exh_siphon_area
exh_siphon_ECD
length
width_shell
area_shell
wet_wgt
dry_wgt
AFDW
AFDW_no_shell
theme
None, User defined
species scientific name (binomial)
experiment id
date
width
No BCO-DMO term
length
weight
dry_wgt_globec
featureType
BCO-DMO Standard Parameters
scale or balance
instrument
BCO-DMO Standard Instruments
Jumars_2014
service
Deployment Activity
Gulf of Maine lab
place
Locations
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
A framework to characterize inhalant siphon flows of aquatic benthos
https://osprey.bco-dmo.org/project/555567
A framework to characterize inhalant siphon flows of aquatic benthos
<p><em>Description from NSF award abstract:</em><br />
Inhalant siphon flows produced by benthic invertebrates such as clams and tunicates through suspension feeding and respiration can directly affect a wide range of physical and chemical processes in benthic marine ecosystems. These flows are energetically costly and influence the feeding and reproductive biology of the individual. Moreover, an understanding of siphon flows at multiple scales can be widely used not only to address questions of flow fields for other aquatic organisms and exchange processes, but that understanding has direct impacts on a variety of engineering problems such as sewer designs. Despite the importance of these flow fields in biology, relatively little research has been conducted on this topic, specifically on inhalant (vs. exhalant) flows. For this study, the PIs have modeled the flow outside the siphon entrance of several important benthic marine animals and have found radically different results from those commonly assumed. Given these findings, the PIs propose to test the results of their numerical simulation on inanimate physical models, and then verify their accuracy using live organisms.</p>
<p>The proposed numerical modeling will examine and predict effects of several parameters including inhalant siphon wall thickness, siphon height, disturbances caused by exhalant flows, and sensitivity to ambient flows. Predictions will be initially tested by using inanimate analog models. To provide a broad ecological framework, the PIs will then focus on five model suspension feeders, each of which has been extensively studied, and include a species of benthic shrimp, a tunicate, a soft shelled clam, the parchment worm, and a tube-dwelling amphipod. This suite of species will provide a broad description of intake flows as the combination of feeding systems spans nearly the full range of Reynolds numbers observed in animals that produce siphon flows. The results of this study will improve current understanding the effects of organismal intake flows on near-bed processes such as vertical fluxes of organic and inorganic nutrients, an important aspect of benthic ecology. Direct deliverables will include verified quantitative models of inhalant flows of marine benthos, connecting form and function and detailing fluid mechanical costs of operation.</p>
Inhalant flows
largerWorkCitation
project
eng; USA
biota
oceans
Gulf of Maine lab
2014-12-09
2014-12-09
Laboratory data to be generated at the Darling Marine Center and the University of Colorado
0
BCO-DMO catalogue of parameters from Ciona intestinalis, Mercenaria mercenaria and Mya arenaria size data from specimens used in stereoscopic particle image velocimetry (PIV) experiments (Inhalant flows project)
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/655634.rdf
Name: species
Units: unitless
Description: <p>species used in PIV experiment</p>
http://lod.bco-dmo.org/id/dataset-parameter/655635.rdf
Name: experiment
Units: unitless
Description: <p>experiment identification number</p>
http://lod.bco-dmo.org/id/dataset-parameter/655636.rdf
Name: date
Units: year-month-day
Description: <p>experiment date formatted as yyyy-mm-dd</p>
http://lod.bco-dmo.org/id/dataset-parameter/655637.rdf
Name: inh_siphon_d1
Units: mm
Description: <p>inhalant siphon mouth long axis diameter</p>
http://lod.bco-dmo.org/id/dataset-parameter/655638.rdf
Name: inh_siphon_d2
Units: mm
Description: <p>inhalant siphon mouth short axis diameter</p>
http://lod.bco-dmo.org/id/dataset-parameter/655639.rdf
Name: no_name
Units: nd
Description: <p>to be described</p>
http://lod.bco-dmo.org/id/dataset-parameter/655640.rdf
Name: inh_siphon_area
Units: mm^2
Description: <p>inhalant siphon mouth cross-sectional area</p>
http://lod.bco-dmo.org/id/dataset-parameter/655641.rdf
Name: inh_siphon_ECD
Units: mm
Description: <p>inhalant siphon mouth equivalent circular diameter = sqrt(in d1 * in d2)</p>
http://lod.bco-dmo.org/id/dataset-parameter/655642.rdf
Name: exh_siphon_d1
Units: mm
Description: <p>exhalant siphon mouth long axis diameter</p>
http://lod.bco-dmo.org/id/dataset-parameter/655643.rdf
Name: exh_siphon_d2
Units: mm
Description: <p>exhalant siphon mouth short axis diameter</p>
http://lod.bco-dmo.org/id/dataset-parameter/655644.rdf
Name: exh_siphon_area
Units: mm^2
Description: <p>exhalant siphon mouth cross-sectional area</p>
http://lod.bco-dmo.org/id/dataset-parameter/655645.rdf
Name: exh_siphon_ECD
Units: mm
Description: <p>exhalant siphon mouth equivalent circular diameter = sqrt(in d1 * in d2)</p>
http://lod.bco-dmo.org/id/dataset-parameter/655646.rdf
Name: length
Units: mm
Description: <p>Ciona total length or mollusc shell length</p>
http://lod.bco-dmo.org/id/dataset-parameter/655647.rdf
Name: width_shell
Units: mm
Description: <p>Mollusc shell width</p>
http://lod.bco-dmo.org/id/dataset-parameter/655648.rdf
Name: area_shell
Units: mm
Description: <p>Mollusc shell area</p>
http://lod.bco-dmo.org/id/dataset-parameter/655649.rdf
Name: wet_wgt
Units: g
Description: <p>wet weight</p>
http://lod.bco-dmo.org/id/dataset-parameter/655650.rdf
Name: dry_wgt
Units: g
Description: <p>dry weight</p>
http://lod.bco-dmo.org/id/dataset-parameter/655651.rdf
Name: AFDW
Units: g
Description: <p>ash free dry weight</p>
http://lod.bco-dmo.org/id/dataset-parameter/655652.rdf
Name: AFDW_no_shell
Units: g
Description: <p>ash free dry weight minus shell</p>
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2714
https://datadocs.bco-dmo.org/file/g77yOYYcm6JMwB/susp_feed_sizes_all.csv
susp_feed_sizes_all.csv
Primary data file for dataset ID 655604
download
https://osprey.bco-dmo.org/dataset/655604/data/download
download
onLine
dataset
<p><strong>BCO-DMO Processing:</strong><br />
- added conventional header with dataset name, PI name, version date, reference information<br />
- renamed parameters to BCO-DMO standard</p>
Specified by the Principal Investigator(s)
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
PI Supplied Instrument Name: Instrument Name: scale or balance Instrument Short Name: Instrument Description: Devices that determine the mass or weight of a sample. Community Standard Description: http://vocab.nerc.ac.uk/collection/L05/current/LAB13/
Deployment: Jumars_2014
Jumars_2014
lab University of Maine
lab University of Maine
laboratory
Jumars_2014
Dr Peter Jumars
University of Maine
lab University of Maine
lab University of Maine
laboratory