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            <gmx:Anchor xlink:href="http://lod.bco-dmo.org/id/dataset/663524.rdf" xlink:actuate="onRequest">Coral energy reserve data from Puerto Morelos, Mexico including calcification, chlorophyll a, stable isotopes, and health metrics</gmx:Anchor>
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            <gco:CharacterString>Cite this dataset as: Grottoli, A. G. (2016) Coral energy reserve data from Puerto Morelos, Mexico including calcification, chlorophyll a, stable isotopes, and health metrics. Biological and Chemical Oceanography Data Management Office (BCO-DMO). Version Date 2016-10-28 [if applicable, indicate subset used]. http://lod.bco-dmo.org/id/dataset/663524 [access date]</gco:CharacterString>
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        <gco:CharacterString>Coral energy reserves; calcification, chlorophyll a, stable carbon isotopes, stable nitrogen isotopes Dataset Description: &amp;lt;p&amp;gt;This dataset includes metrics related to coral energy reserves. &amp;amp;nbsp;Fragments of coral species (&amp;lt;em&amp;gt;Orbicella faveolata&amp;lt;/em&amp;gt;,&amp;amp;nbsp;&amp;lt;em&amp;gt;Porites astreoides&amp;lt;/em&amp;gt;, and&amp;amp;nbsp;&amp;lt;em&amp;gt;Porites divaricata&amp;lt;/em&amp;gt;)&amp;amp;nbsp;were analyzed for concentrations of lipids, proteins, carbohydrates, and chlorophyll a. Carbon isotopic ratios d13C and d15N were measured&amp;amp;nbsp;in both the host&amp;amp;nbsp;and endosymbiont. &amp;amp;nbsp;Health metrics are included&amp;amp;nbsp;which describe bleaching status.&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;These data were published in:&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Schoepf V, Grottoli AG, Levas SJ, Aschaffenburg MD, Baumann J, Matsui Y, Warner ME. (2015) Annual coral bleaching can impair the long-term recovery capacity of corals. Proceedings of the Royal Society B 282: 20151887. &amp;lt;a href=&amp;quot;http://dx.doi.org/10.1098/rspb.2015.1887&amp;quot; target=&amp;quot;_blank&amp;quot;&amp;gt;http://dx.doi.org/10.1098/rspb.2015.1887&amp;lt;/a&amp;gt;.&amp;amp;nbsp;&amp;amp;nbsp;&amp;lt;/p&amp;gt; Methods and Sampling: &amp;lt;p&amp;gt;&amp;lt;strong&amp;gt;Experimental Design&amp;lt;/strong&amp;gt; (text extracted from Grottoli et al., 2014. &amp;amp;nbsp;See publication for figures and full methods description)&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;In July 2009, 10 coral fragments from nine healthy colonies of Porites divaricata (branching morphology), Porites astreoides (mounding/encrusting morphology), and Orbicella faveolata (formerly Montastraea faveolata (large, mounding morphology) were collected near Puerto Morelos, Mexico (20 deg 500 N, 86 deg 520 W region). &amp;amp;nbsp;Parent colonies were all at least 10m apart and thus assumed to be genotypically different. &amp;amp;nbsp;Fragments were mounted on labeled PVC tiles, and randomly placed in 10 shaded (600 umol photons m(-2) &amp;amp;nbsp;s(-1) ) outdoor flow-through seawater tanks, allowed to acclimate for 5 days, and then buoyantly weighed. The temperature in five tanks was gradually raised to 31.5C +- 0.20C (single bleaching treatment) over 7 days then maintained at the elevated temperature, while the other five tanks received ambient reef water (controls; 30.6 C &amp;amp;nbsp;+- 0.24C) . After 15 days, one treatment and one control fragment from each parent colony of each species were buoyantly weighed and then frozen at 80 C (0 weeks on the reef). The remaining fragments were transplanted back to the reef at 4.9 m depth (20 deg 52.8150 N, 86 deg 50.9890 W). After 6 weeks on the reef, one additional treatment and control fragment from each colony of each species were collected, buoyantly weighed, and frozen at 80C, while the remaining fragments stayed on the reef for a full year at ambient reef temperatures.&amp;amp;nbsp;&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;&amp;lt;strong&amp;gt;Chlorophyll a&amp;lt;/strong&amp;gt; was determined according to Jeffrey &amp;amp;amp; Humphrey (1975)&amp;amp;nbsp; and standardized to surface area (Marsh 1970). Chlorophyll a values at 0 and 1.5 months on the reef following repeat bleaching are from Schoepf et al. (2011).&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;&amp;lt;strong&amp;gt;Total soluble lipids&amp;lt;/strong&amp;gt;, animal soluble protein and animal soluble carbohydrate were determined on ground, frozen coral fragments using established methods (Rodrigues &amp;amp;amp; Grottoli 2007; Schoepf et al 2013) and then converted to Joules per gram ash-free dry weight (Gnaiger &amp;amp;amp; Bitterlich 1984)).&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;&amp;lt;strong&amp;gt;Net calcification&amp;lt;/strong&amp;gt; was determined using the buoyant weight technique (Jokiel et al 1978) and standardized to surface area. Calcification rates at 0 and 1.5 months on the reef following repeat bleaching are from Grottoli et al. (2014).&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;&amp;lt;strong&amp;gt;Tissue C and N isotopic analyses&amp;lt;/strong&amp;gt; were performed on separated animal host and endosymbiont fractions using established methods (Rodrigues &amp;amp;amp; Grottoli 2006; Hughes et al 2010). &amp;amp;nbsp;The difference between d13Ch and d13Ce (i.e. d13Ch2e) was calculated to determine the relative contribution of photoautotrophic versus heterotrophic carbon to the coral (Rodrigues &amp;amp;amp; Grottoli 2006; Muscatine et al 1989). Repeated measurements of commercial standards (USGS-24, IAEA-N2) had a standard deviation of +- 0.04(permille)&amp;amp;nbsp;for d13C (n = 55) and +-0.11(permille) for d15N (n = 51).&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;&amp;lt;strong&amp;gt;References:&amp;lt;/strong&amp;gt;&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Gnaiger, E., and G. Bitterlich. &amp;quot;Proximate biochemical composition and caloric content calculated from elemental CHN analysis: a stoichiometric concept.&amp;quot;&amp;amp;nbsp;&amp;lt;em&amp;gt;Oecologia&amp;lt;/em&amp;gt;&amp;amp;nbsp;62.3 (1984): 289-298.&amp;amp;nbsp;&amp;lt;a href=&amp;quot;http://dx.doi.org/10.1007/BF00384259&amp;quot;&amp;gt;http://dx.doi.org/10.1007/BF00384259&amp;lt;/a&amp;gt;&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Grottoli, Andréa G., et al. &amp;quot;The cumulative impact of annual coral bleaching can turn some coral species winners into losers.&amp;quot;&amp;amp;nbsp;&amp;lt;em&amp;gt;Global change biology&amp;amp;nbsp;&amp;lt;/em&amp;gt;20.12 (2014): 3823-3833.&amp;amp;nbsp;&amp;lt;a href=&amp;quot;http://dx.doi.org/10.1111/gcb.12658&amp;quot;&amp;gt;http://dx.doi.org/10.1111/gcb.12658&amp;lt;/a&amp;gt;&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Hughes, A. D., et al. &amp;quot;Acquisition and assimilation of carbon in non-bleached and bleached corals.&amp;quot;&amp;amp;nbsp;&amp;lt;em&amp;gt;Marine ecology progress series&amp;lt;/em&amp;gt;&amp;amp;nbsp;420 (2010): 91-101.&amp;amp;nbsp;&amp;lt;a href=&amp;quot;http://dx.doi.org/10.3354/meps08866&amp;quot;&amp;gt;http://dx.doi.org/10.3354/meps08866&amp;lt;/a&amp;gt;&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Jeffrey, SW T., and G. F. Humphrey. &amp;quot;New spectrophotometric equations for determining chlorophylls a, b, c1 and c2 in higher plants, algae and natural phytoplankton.&amp;quot;&amp;amp;nbsp;&amp;lt;em&amp;gt;Biochem Physiol Pflanz BPP&amp;lt;/em&amp;gt;&amp;amp;nbsp;(1975).&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Jokiel, P. L., J. E. Maragos, and L. Franzisket. &amp;quot;Coral growth: buoyant weight technique.&amp;quot;&amp;amp;nbsp;&amp;lt;em&amp;gt;Coral reefs: research methods. UNESCO, Paris&amp;lt;/em&amp;gt;&amp;amp;nbsp;(1978): 529-541.&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Marsh, James A. &amp;quot;Primary Productivity of Reef‐Building Calcareous Red Algae.&amp;quot;&amp;amp;nbsp;Ecology&amp;amp;nbsp;51.2 (1970): 255-263.&amp;amp;nbsp;&amp;lt;a href=&amp;quot;http://dx.doi.org/10.2307/1933661&amp;quot;&amp;gt;http://dx.doi.org/10.2307/1933661&amp;lt;/a&amp;gt;&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Muscatine, L., L. R. McCloskey, and R. E. Marian. &amp;quot;Estimating the daily contribution of carbon from zooxanthellae to coral animal respiration.&amp;quot;&amp;amp;nbsp;&amp;lt;em&amp;gt;Oceanography&amp;lt;/em&amp;gt;&amp;amp;nbsp;26.4 (1981).&amp;amp;nbsp;&amp;lt;a href=&amp;quot;http://dx.doi.org/10.4319/lo.1981.26.4.0601&amp;quot;&amp;gt;http://dx.doi.org/10.4319/lo.1981.26.4.0601&amp;lt;/a&amp;gt;&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Rodrigues, Lisa J., and Andréa G. Grottoli. &amp;quot;Calcification rate and the stable carbon, oxygen, and nitrogen isotopes in the skeleton, host tissue, and zooxanthellae of bleached and recovering Hawaiian corals.&amp;quot;&amp;amp;nbsp;&amp;lt;em&amp;gt;Geochimica et Cosmochimica Acta&amp;lt;/em&amp;gt;&amp;amp;nbsp;70.11 (2006): 2781-2789.&amp;amp;nbsp;&amp;lt;a href=&amp;quot;http://dx.doi.org/10.1016/j.gca.2006.02.014&amp;quot;&amp;gt;http://dx.doi.org/10.1016/j.gca.2006.02.014&amp;lt;/a&amp;gt;&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Rodrigues, Lisa J., and Andréa G. Grottoli. &amp;quot;Energy reserves and metabolism as indicators of coral recovery from bleaching.&amp;quot;&amp;amp;nbsp;&amp;lt;em&amp;gt;Limnology and oceanography&amp;lt;/em&amp;gt;52.5 (2007): 1874-1882.&amp;amp;nbsp;&amp;lt;a href=&amp;quot;http://doi:10.4319/lo.2007.52.5.1874&amp;quot;&amp;gt;http://doi:10.4319/lo.2007.52.5.1874&amp;lt;/a&amp;gt;&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Schoepf, Verena, et al. &amp;quot;Short-term coral bleaching is not recorded by skeletal boron isotopes.&amp;quot;&amp;amp;nbsp;PloS one&amp;amp;nbsp;9.11 (2014): e112011.&amp;amp;nbsp;&amp;lt;a href=&amp;quot;http://dx.doi.org/10.1371/journal.pone.0112011&amp;quot;&amp;gt;http://dx.doi.org/10.1371/journal.pone.0112011&amp;lt;/a&amp;gt;&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Schoepf, V., et al. others (2013) &amp;quot;Coral energy reserves and calcification in a high-CO2 world at two temperatures.&amp;quot;&amp;amp;nbsp;&amp;lt;em&amp;gt;PLoS ONE&amp;lt;/em&amp;gt;&amp;amp;nbsp;8: e75049.&amp;amp;nbsp;&amp;lt;a href=&amp;quot;http://dx.doi.org/75010.71371/journal.pone.0075049&amp;quot;&amp;gt;http://dx.doi.org/75010.71371/journal.pone.0075049&amp;lt;/a&amp;gt;&amp;lt;/p&amp;gt;</gco:CharacterString>
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        <gmx:Anchor xlink:href="http://lod.bco-dmo.org/id/award/516099.rdf" xlink:title="OCE-0825413" xlink:actuate="onRequest">Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-0825413 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=0825413</gmx:Anchor>
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	Name: d13C_e
	Units: per mil (o/oo)
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	Units: per mil (o/oo)
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	Units: grams per g ash-free dry weight (g/gdw)
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                <gco:CharacterString>&amp;lt;p&amp;gt;&amp;lt;strong&amp;gt;Experimental Design&amp;lt;/strong&amp;gt; (text extracted from Grottoli et al., 2014. &amp;amp;nbsp;See publication for figures and full methods description)&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;In July 2009, 10 coral fragments from nine healthy colonies of Porites divaricata (branching morphology), Porites astreoides (mounding/encrusting morphology), and Orbicella faveolata (formerly Montastraea faveolata (large, mounding morphology) were collected near Puerto Morelos, Mexico (20 deg 500 N, 86 deg 520 W region). &amp;amp;nbsp;Parent colonies were all at least 10m apart and thus assumed to be genotypically different. &amp;amp;nbsp;Fragments were mounted on labeled PVC tiles, and randomly placed in 10 shaded (600 umol photons m(-2) &amp;amp;nbsp;s(-1) ) outdoor flow-through seawater tanks, allowed to acclimate for 5 days, and then buoyantly weighed. The temperature in five tanks was gradually raised to 31.5C +- 0.20C (single bleaching treatment) over 7 days then maintained at the elevated temperature, while the other five tanks received ambient reef water (controls; 30.6 C &amp;amp;nbsp;+- 0.24C) . After 15 days, one treatment and one control fragment from each parent colony of each species were buoyantly weighed and then frozen at 80 C (0 weeks on the reef). The remaining fragments were transplanted back to the reef at 4.9 m depth (20 deg 52.8150 N, 86 deg 50.9890 W). After 6 weeks on the reef, one additional treatment and control fragment from each colony of each species were collected, buoyantly weighed, and frozen at 80C, while the remaining fragments stayed on the reef for a full year at ambient reef temperatures.&amp;amp;nbsp;&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;&amp;lt;strong&amp;gt;Chlorophyll a&amp;lt;/strong&amp;gt; was determined according to Jeffrey &amp;amp;amp; Humphrey (1975)&amp;amp;nbsp; and standardized to surface area (Marsh 1970). Chlorophyll a values at 0 and 1.5 months on the reef following repeat bleaching are from Schoepf et al. (2011).&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;&amp;lt;strong&amp;gt;Total soluble lipids&amp;lt;/strong&amp;gt;, animal soluble protein and animal soluble carbohydrate were determined on ground, frozen coral fragments using established methods (Rodrigues &amp;amp;amp; Grottoli 2007; Schoepf et al 2013) and then converted to Joules per gram ash-free dry weight (Gnaiger &amp;amp;amp; Bitterlich 1984)).&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;&amp;lt;strong&amp;gt;Net calcification&amp;lt;/strong&amp;gt; was determined using the buoyant weight technique (Jokiel et al 1978) and standardized to surface area. Calcification rates at 0 and 1.5 months on the reef following repeat bleaching are from Grottoli et al. (2014).&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;&amp;lt;strong&amp;gt;Tissue C and N isotopic analyses&amp;lt;/strong&amp;gt; were performed on separated animal host and endosymbiont fractions using established methods (Rodrigues &amp;amp;amp; Grottoli 2006; Hughes et al 2010). &amp;amp;nbsp;The difference between d13Ch and d13Ce (i.e. d13Ch2e) was calculated to determine the relative contribution of photoautotrophic versus heterotrophic carbon to the coral (Rodrigues &amp;amp;amp; Grottoli 2006; Muscatine et al 1989). Repeated measurements of commercial standards (USGS-24, IAEA-N2) had a standard deviation of +- 0.04(permille)&amp;amp;nbsp;for d13C (n = 55) and +-0.11(permille) for d15N (n = 51).&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;&amp;lt;strong&amp;gt;References:&amp;lt;/strong&amp;gt;&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Gnaiger, E., and G. Bitterlich. &amp;quot;Proximate biochemical composition and caloric content calculated from elemental CHN analysis: a stoichiometric concept.&amp;quot;&amp;amp;nbsp;&amp;lt;em&amp;gt;Oecologia&amp;lt;/em&amp;gt;&amp;amp;nbsp;62.3 (1984): 289-298.&amp;amp;nbsp;&amp;lt;a href=&amp;quot;http://dx.doi.org/10.1007/BF00384259&amp;quot;&amp;gt;http://dx.doi.org/10.1007/BF00384259&amp;lt;/a&amp;gt;&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Grottoli, Andréa G., et al. &amp;quot;The cumulative impact of annual coral bleaching can turn some coral species winners into losers.&amp;quot;&amp;amp;nbsp;&amp;lt;em&amp;gt;Global change biology&amp;amp;nbsp;&amp;lt;/em&amp;gt;20.12 (2014): 3823-3833.&amp;amp;nbsp;&amp;lt;a href=&amp;quot;http://dx.doi.org/10.1111/gcb.12658&amp;quot;&amp;gt;http://dx.doi.org/10.1111/gcb.12658&amp;lt;/a&amp;gt;&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Hughes, A. D., et al. &amp;quot;Acquisition and assimilation of carbon in non-bleached and bleached corals.&amp;quot;&amp;amp;nbsp;&amp;lt;em&amp;gt;Marine ecology progress series&amp;lt;/em&amp;gt;&amp;amp;nbsp;420 (2010): 91-101.&amp;amp;nbsp;&amp;lt;a href=&amp;quot;http://dx.doi.org/10.3354/meps08866&amp;quot;&amp;gt;http://dx.doi.org/10.3354/meps08866&amp;lt;/a&amp;gt;&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Jeffrey, SW T., and G. F. Humphrey. &amp;quot;New spectrophotometric equations for determining chlorophylls a, b, c1 and c2 in higher plants, algae and natural phytoplankton.&amp;quot;&amp;amp;nbsp;&amp;lt;em&amp;gt;Biochem Physiol Pflanz BPP&amp;lt;/em&amp;gt;&amp;amp;nbsp;(1975).&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Jokiel, P. L., J. E. Maragos, and L. Franzisket. &amp;quot;Coral growth: buoyant weight technique.&amp;quot;&amp;amp;nbsp;&amp;lt;em&amp;gt;Coral reefs: research methods. UNESCO, Paris&amp;lt;/em&amp;gt;&amp;amp;nbsp;(1978): 529-541.&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Marsh, James A. &amp;quot;Primary Productivity of Reef‐Building Calcareous Red Algae.&amp;quot;&amp;amp;nbsp;Ecology&amp;amp;nbsp;51.2 (1970): 255-263.&amp;amp;nbsp;&amp;lt;a href=&amp;quot;http://dx.doi.org/10.2307/1933661&amp;quot;&amp;gt;http://dx.doi.org/10.2307/1933661&amp;lt;/a&amp;gt;&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Muscatine, L., L. R. McCloskey, and R. E. Marian. &amp;quot;Estimating the daily contribution of carbon from zooxanthellae to coral animal respiration.&amp;quot;&amp;amp;nbsp;&amp;lt;em&amp;gt;Oceanography&amp;lt;/em&amp;gt;&amp;amp;nbsp;26.4 (1981).&amp;amp;nbsp;&amp;lt;a href=&amp;quot;http://dx.doi.org/10.4319/lo.1981.26.4.0601&amp;quot;&amp;gt;http://dx.doi.org/10.4319/lo.1981.26.4.0601&amp;lt;/a&amp;gt;&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Rodrigues, Lisa J., and Andréa G. Grottoli. &amp;quot;Calcification rate and the stable carbon, oxygen, and nitrogen isotopes in the skeleton, host tissue, and zooxanthellae of bleached and recovering Hawaiian corals.&amp;quot;&amp;amp;nbsp;&amp;lt;em&amp;gt;Geochimica et Cosmochimica Acta&amp;lt;/em&amp;gt;&amp;amp;nbsp;70.11 (2006): 2781-2789.&amp;amp;nbsp;&amp;lt;a href=&amp;quot;http://dx.doi.org/10.1016/j.gca.2006.02.014&amp;quot;&amp;gt;http://dx.doi.org/10.1016/j.gca.2006.02.014&amp;lt;/a&amp;gt;&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Rodrigues, Lisa J., and Andréa G. Grottoli. &amp;quot;Energy reserves and metabolism as indicators of coral recovery from bleaching.&amp;quot;&amp;amp;nbsp;&amp;lt;em&amp;gt;Limnology and oceanography&amp;lt;/em&amp;gt;52.5 (2007): 1874-1882.&amp;amp;nbsp;&amp;lt;a href=&amp;quot;http://doi:10.4319/lo.2007.52.5.1874&amp;quot;&amp;gt;http://doi:10.4319/lo.2007.52.5.1874&amp;lt;/a&amp;gt;&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Schoepf, Verena, et al. &amp;quot;Short-term coral bleaching is not recorded by skeletal boron isotopes.&amp;quot;&amp;amp;nbsp;PloS one&amp;amp;nbsp;9.11 (2014): e112011.&amp;amp;nbsp;&amp;lt;a href=&amp;quot;http://dx.doi.org/10.1371/journal.pone.0112011&amp;quot;&amp;gt;http://dx.doi.org/10.1371/journal.pone.0112011&amp;lt;/a&amp;gt;&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Schoepf, V., et al. others (2013) &amp;quot;Coral energy reserves and calcification in a high-CO2 world at two temperatures.&amp;quot;&amp;amp;nbsp;&amp;lt;em&amp;gt;PLoS ONE&amp;lt;/em&amp;gt;&amp;amp;nbsp;8: e75049.&amp;amp;nbsp;&amp;lt;a href=&amp;quot;http://dx.doi.org/75010.71371/journal.pone.0075049&amp;quot;&amp;gt;http://dx.doi.org/75010.71371/journal.pone.0075049&amp;lt;/a&amp;gt;&amp;lt;/p&amp;gt;</gco:CharacterString>
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