http://lod.bco-dmo.org/id/dataset/664454
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2016-11-10
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
Chemistry from discrete samples of hydrothermal springs sampled by the HOV Alvin during R/V Atlantis cruise AT26-24 at Dorado Outcrop in December of 2014
2016-11-10
publication
2016-11-10
revision
BCO-DMO Linked Data URI
2016-11-10
creation
http://lod.bco-dmo.org/id/dataset/664454
C. Geoffrey Wheat
University of Alaska Fairbanks
principalInvestigator
Andrew Fisher
University of California-Santa Cruz
principalInvestigator
Samuel Hulme
Moss Landing Marine Laboratories
principalInvestigator
James McManus
University of Akron
principalInvestigator
Beth N. Orcutt
Bigelow Laboratory for Ocean Sciences
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Wheat, C., Fisher, A., Hulme, S., McManus, J., Orcutt, B. N. (2016) Chemistry from discrete samples of hydrothermal springs sampled by the HOV Alvin during R/V Atlantis cruise AT26-24 at Dorado Outcrop in December of 2014. Biological and Chemical Oceanography Data Management Office (BCO-DMO). Version Date 2016-11-10 [if applicable, indicate subset used]. http://lod.bco-dmo.org/id/dataset/664454 [access date]
Chemistry from discrete samples of hydrothermal springs Dataset Description: <p>This dataset contains chemistry from discrete hydrothermal water samples collected by syringe. &nbsp;Dissolved inorganic carbon (DIC), stable carbon isotope ratio (d13C), stable carbon isotope ratio of dissolved inorganic carbon (13C/12C ratio in DIC), alkalinity, chlorinity, the concentration of nitrate plus nitrite, and pH are included in the data. &nbsp;Concentrations of the following elements and compounds are also included;&nbsp;Mo, V, Rb, Cs, U, PO4, silicic acid, Sr, Li, S, Na, Ca, Mg, K, B, Mn, Fe. &nbsp;Latitude, longitude, and date of the Alvin dives that collected these data are also included. Collection occurred during the&nbsp;R/V Atlantis cruise&nbsp;AT26-24.&nbsp;</p> Methods and Sampling: <p>Syringe samples of hydrothermal water&nbsp;were collected during Alvin dives.</p>
<p>The Alvin dives were conducted off the west coast of Costa Rica in the Pacific Ocean at Dorado Outcrop during the R/V&nbsp;Atlantis&nbsp;cruise AT26-24. &nbsp;For more information about operations of this cruise see the cruise pages which contain links to cruise reports (<a href="http://www.bco-dmo.org/deployment/627856" target="_blank">AT26-24</a>)</p>
<p><strong>Chemical Measurements:</strong></p>
<p>All fluids were measured using established standard protocols. At sea, alkalinity was determined potentiometrically via titration with 0.1N hydrochloric acid; a pH measurement is conducted as part of this procedure. An Inductively Coupled Plasma Optical Emission Spectrophotometer (ICPOES) was used to measure Na, K, Sr, Li, Mg, Ca, and S with a 1:200 dilution and Sr, Li, Fe, Mn, and B with a 1:25 dilution in 1% nitric acid. An inductively coupled plasma mass spectrometry (ICP-MS)&nbsp;was used to analyze Rb, Cs, Ba, Mo, V and U with a 1:75 dilution in 3% nitric acid. Nutrients (silicate, phosphate, total nitrogen and nitrate) were measured at Oregon State University using standard colorimetric, automated, segmented flow procedures. Chlorinity was determined potentiometrically via titration with silver nitrate. Carbon analyses were conducted at Oregon State University</p>
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1130146 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1130146
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1131210 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1131210
completed
C. Geoffrey Wheat
University of Alaska Fairbanks
831-633-7033
Institute of Marine Science P. O. Box 475
Moss Landing
CA
95039
USA
wheat@mbari.org
pointOfContact
Andrew Fisher
University of California-Santa Cruz
831-459-5598
E&MS Building, Room A232 1156 High Street
Santa Cruz
CA
95064
USA
afisher@ucsc.edu
pointOfContact
Samuel Hulme
Moss Landing Marine Laboratories
831-771-4454
8272 Moss Landing Rd.
Moss Landing
CA
95039
USA
shulme@mlml.calstate.edu
pointOfContact
James McManus
University of Akron
207-315-2567, ext. 307
60 Bigelow Drive
East Boothbay
ME
04544
USA
mcmanusjim@icloud.com
pointOfContact
Beth N. Orcutt
Bigelow Laboratory for Ocean Sciences
207-315-2567 ext 312
60 Bigelow Drive PO Box 380
East Boothbay
Maine
04544
USA
borcutt@bigelow.org
pointOfContact
asNeeded
Unknown
dive_id
dive_date
dive_lat
dive_lon
sample_id
DIC
DIC_stdev
DIC_d13C
DIC_d13C_stdev
Mo
V
pH
alkalinity
chlorinity
Rb
Cs
U
PO4
N_plus_N
silicic_acid
Sr
Li
S
Na
Ca
Mg
K
B
Mn
Fe
syringe sample taken by Alvin
inductively coupled plasma mass spectrometry (ICP-MS)
Inductively Coupled Plasma Optical Emission Spectrophotometer (ICPOES)
theme
None, User defined
dive_id
date
latitude
longitude
sample identification
dissolved inorganic Carbon
13C to 12C ratio in DIC
Molybdenum
Vanadium
pH
total alkalinity (TA)
chlorinity
Rubidium
Cesium
Uranium
trace metal concentration
nitrate plus nitrite
Silicate, Si(OH)4, silicic acid
Strontium
Lithium
trace element concentration
Sodium
Calcium
Magnesium
potassium
Boron
Manganese
Iron
featureType
BCO-DMO Standard Parameters
Discrete water sampler
Inductively Coupled Plasma Mass Spectrometer
Inductively Coupled Plasma Optical Emission Spectrometer
instrument
BCO-DMO Standard Instruments
AT26-24
service
Deployment Activity
Dorado Outcrop near Cocos Ridge; (87 06'W, 9 50'N)
place
Locations
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
Center for Dark Energy Biosphere Investigations
http://www.darkenergybiosphere.org
Center for Dark Energy Biosphere Investigations
The mission of the Center for Dark Energy Biosphere Investigations (C-DEBI) is to explore life beneath the seafloor and make transformative discoveries that advance science, benefit society, and inspire people of all ages and origins.
C-DEBI provides a framework for a large, multi-disciplinary group of scientists to pursue fundamental questions about life deep in the sub-surface environment of Earth. The fundamental science questions of C-DEBI involve exploration and discovery, uncovering the processes that constrain the sub-surface biosphere below the oceans, and implications to the Earth system. What type of life exists in this deep biosphere, how much, and how is it distributed and dispersed? What are the physical-chemical conditions that promote or limit life? What are the important oxidation-reduction processes and are they unique or important to humankind? How does this biosphere influence global energy and material cycles, particularly the carbon cycle? Finally, can we discern how such life evolved in geological settings beneath the ocean floor, and how this might relate to ideas about the origin of life on our planet?
C-DEBI's scientific goals are pursued with a combination of approaches:
(1) coordinate, integrate, support, and extend the research associated with four major programs—Juan de Fuca Ridge flank (JdF), South Pacific Gyre (SPG), North Pond (NP), and Dorado Outcrop (DO)—and other field sites;
(2) make substantial investments of resources to support field, laboratory, analytical, and modeling studies of the deep subseafloor ecosystems;
(3) facilitate and encourage synthesis and thematic understanding of submarine microbiological processes, through funding of scientific and technical activities, coordination and hosting of meetings and workshops, and support of (mostly junior) researchers and graduate students; and
(4) entrain, educate, inspire, and mentor an interdisciplinary community of researchers and educators, with an emphasis on undergraduate and graduate students and early-career scientists.
Note: Katrina Edwards was a former PI of C-DEBI; James Cowen is a former co-PI.
Data Management:
C-DEBI is committed to ensuring all the data generated are publically available and deposited in a data repository for long-term storage as stated in their Data Management Plan (PDF) and in compliance with the NSF Ocean Sciences Sample and Data Policy. The data types and products resulting from C-DEBI-supported research include a wide variety of geophysical, geological, geochemical, and biological information, in addition to education and outreach materials, technical documents, and samples. All data and information generated by C-DEBI-supported research projects are required to be made publically available either following publication of research results or within two (2) years of data generation.
To ensure preservation and dissemination of the diverse data-types generated, C-DEBI researchers are working with BCO-DMO Data Managers make data publicly available online. The partnership with BCO-DMO helps ensure that the C-DEBI data are discoverable and available for reuse. Some C-DEBI data is better served by specialized repositories (NCBI's GenBank for sequence data, for example) and, in those cases, BCO-DMO provides dataset documentation (metadata) that includes links to those external repositories.
C-DEBI
largerWorkCitation
program
Discovery, sampling, and quantification of flows from cool yet massive ridge-flank hydrothermal springs on Dorado Outcrop, eastern Pacific Ocean
http://www.darkenergybiosphere.org/research/dorado.html
Discovery, sampling, and quantification of flows from cool yet massive ridge-flank hydrothermal springs on Dorado Outcrop, eastern Pacific Ocean
<p><em>Description from NSF award abstract:</em><br />
Pristine fluids from a typical ridge-flank hydrothermal system have never been sampled, mainly because it has not been possible to locate a site of focused discharge where representative samples could be collected. The PIs have located a small basement feature, Dorado outcrop, on 23 m.y.-old seafloor on the eastern flank of the East Pacific Rise that they plan to sample to determine the fluid composition, and to assess the rate of discharge from the outcrop, so that they can quantify the chemical impact of this hydrothermal system. They plan an 18-day expedition that combines the surveying capabilities of the AUV Sentry (bathymetric, sub-bottom sonar, photo mosaics, water column anomalies) and an ocean-class vessel capable of collecting high-quality multi-beam data and CTD samples, and supporting the survey and sampling capabilities of the ROV Jason II for collection of spring and plume fluids, heat flow data, sediment push cores, and still and video photography. These data and samples will be combined hopefully to generate the first well-constrained estimates of hydrothermal flows from Dorado outcrop. This expedition will result in the collection of samples and data from a "fire hose" of ridge-flank, hydrothermal system, challenging the commonly held view that discharge from ridge flank hydrothermal systems occurs primarily from diffuse seeps.</p>
Dorado Outcrop
largerWorkCitation
project
eng; USA
oceans
Dorado Outcrop near Cocos Ridge; (87 06'W, 9 50'N)
2016-11-10
Dorado Outcrop near Cocos Ridge (9N, 87W)
0
BCO-DMO catalogue of parameters from Chemistry from discrete samples of hydrothermal springs sampled by the HOV Alvin during R/V Atlantis cruise AT26-24 at Dorado Outcrop in December of 2014
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/671567.rdf
Name: dive_id
Units: unitless
Description: <p>Alvin submersible dive identifier</p>
http://lod.bco-dmo.org/id/dataset-parameter/671568.rdf
Name: dive_date
Units: unitless
Description: <p>Alvin submersible dive date in format yyyy-mm-dd</p>
http://lod.bco-dmo.org/id/dataset-parameter/671569.rdf
Name: dive_lat
Units: decimal degrees
Description: <p>Alvin submersible dive latitude; north is positive</p>
http://lod.bco-dmo.org/id/dataset-parameter/671570.rdf
Name: dive_lon
Units: decimal degrees
Description: <p>Alvin submersible dive longitude; east is positive</p>
http://lod.bco-dmo.org/id/dataset-parameter/671571.rdf
Name: sample_id
Units: unitless
Description: <p>Sample identifier</p>
http://lod.bco-dmo.org/id/dataset-parameter/671572.rdf
Name: DIC
Units: permil (0/00)
Description: <p>Dissolved inorganic carbon using Pee Dee Belemnite (PDB) standard</p>
http://lod.bco-dmo.org/id/dataset-parameter/671573.rdf
Name: DIC_stdev
Units: permil (0/00)
Description: <p>Standard deviation of dissolved inorganic carbon using the Pee Dee Belemnite (PDB) standard</p>
http://lod.bco-dmo.org/id/dataset-parameter/671574.rdf
Name: DIC_d13C
Units: permil (0/00)
Description: <p>Stable carbon isotope ratio of dissolved inorganic carbon (13C:12C ratio in DIC) using the Pee Dee Belemnite (PDB) standard</p>
http://lod.bco-dmo.org/id/dataset-parameter/671575.rdf
Name: DIC_d13C_stdev
Units: permil (0/00)
Description: <p>Standard deviation of stable carbon isotope ratio of dissolved inorganic carbon (13C:12C ratio in DIC) using the Pee Dee Belemnite (PDB) standard</p>
http://lod.bco-dmo.org/id/dataset-parameter/671576.rdf
Name: Mo
Units: nanomoles per kilogram (nmol/Kg)
Description: <p>Molybdenum concentration</p>
http://lod.bco-dmo.org/id/dataset-parameter/671577.rdf
Name: V
Units: nanomoles per kilogram (nmol/Kg)
Description: <p>Vanadium concentration</p>
http://lod.bco-dmo.org/id/dataset-parameter/671578.rdf
Name: pH
Units: pH scale
Description: <p>pH</p>
http://lod.bco-dmo.org/id/dataset-parameter/671579.rdf
Name: alkalinity
Units: millimoles per kilogram (umol/Kg)
Description: <p>Alkalinity</p>
http://lod.bco-dmo.org/id/dataset-parameter/671580.rdf
Name: chlorinity
Units: millimoles per kilogram (umol/Kg)
Description: <p>Chlorinity</p>
http://lod.bco-dmo.org/id/dataset-parameter/671581.rdf
Name: Rb
Units: nanomoles per kilogram (nmol/Kg)
Description: <p>Rubidium concentration</p>
http://lod.bco-dmo.org/id/dataset-parameter/671582.rdf
Name: Cs
Units: nanomoles per kilogram (nmol/Kg)
Description: <p>Cesium concentration</p>
http://lod.bco-dmo.org/id/dataset-parameter/671583.rdf
Name: U
Units: nanomoles per kilogram (nmol/Kg)
Description: <p>Uranium concentration</p>
http://lod.bco-dmo.org/id/dataset-parameter/671584.rdf
Name: PO4
Units: micromolar (uM)
Description: <p>Phosphate concentration</p>
http://lod.bco-dmo.org/id/dataset-parameter/671585.rdf
Name: N_plus_N
Units: micromolar (uM)
Description: <p>Nitrate plus Nitrite concentration</p>
http://lod.bco-dmo.org/id/dataset-parameter/671586.rdf
Name: silicic_acid
Units: micromolar (uM)
Description: <p>Silicic acid concentration</p>
http://lod.bco-dmo.org/id/dataset-parameter/671587.rdf
Name: Sr
Units: micromoles per kilogram (umol/Kg)
Description: <p>Strontium concentration</p>
http://lod.bco-dmo.org/id/dataset-parameter/671588.rdf
Name: Li
Units: micromoles per kilogram (umol/Kg)
Description: <p>Lithium concentration</p>
http://lod.bco-dmo.org/id/dataset-parameter/671589.rdf
Name: S
Units: millimoles per kilogram (umol/Kg)
Description: <p>Sulfur concentration</p>
http://lod.bco-dmo.org/id/dataset-parameter/671590.rdf
Name: Na
Units: millimoles per kilogram (umol/Kg)
Description: <p>Sodium concentration</p>
http://lod.bco-dmo.org/id/dataset-parameter/671591.rdf
Name: Ca
Units: millimoles per kilogram (umol/Kg)
Description: <p>Cadmium concentration</p>
http://lod.bco-dmo.org/id/dataset-parameter/671592.rdf
Name: Mg
Units: millimoles per kilogram (umol/Kg)
Description: <p>Magnesium concentration</p>
http://lod.bco-dmo.org/id/dataset-parameter/671593.rdf
Name: K
Units: millimoles per kilogram (umol/Kg)
Description: <p>Potassium concentration</p>
http://lod.bco-dmo.org/id/dataset-parameter/671594.rdf
Name: B
Units: micromoles per kilogram (umol/Kg)
Description: <p>Boron concentration</p>
http://lod.bco-dmo.org/id/dataset-parameter/671595.rdf
Name: Mn
Units: micromoles per kilogram (umol/Kg)
Description: <p>Manganese concentration</p>
http://lod.bco-dmo.org/id/dataset-parameter/671596.rdf
Name: Fe
Units: micromoles per kilogram (umol/Kg)
Description: <p>Iron concentration</p>
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
5439
https://datadocs.bco-dmo.org/file/m77kmZZipp9625/HydroThermDiscrete.csv
HydroThermDiscrete.csv
Primary data file for dataset ID 664454
download
https://osprey.bco-dmo.org/dataset/664454/data/download
download
onLine
dataset
<p>Syringe samples of hydrothermal water&nbsp;were collected during Alvin dives.</p>
<p>The Alvin dives were conducted off the west coast of Costa Rica in the Pacific Ocean at Dorado Outcrop during the R/V&nbsp;Atlantis&nbsp;cruise AT26-24. &nbsp;For more information about operations of this cruise see the cruise pages which contain links to cruise reports (<a href="http://www.bco-dmo.org/deployment/627856" target="_blank">AT26-24</a>)</p>
<p><strong>Chemical Measurements:</strong></p>
<p>All fluids were measured using established standard protocols. At sea, alkalinity was determined potentiometrically via titration with 0.1N hydrochloric acid; a pH measurement is conducted as part of this procedure. An Inductively Coupled Plasma Optical Emission Spectrophotometer (ICPOES) was used to measure Na, K, Sr, Li, Mg, Ca, and S with a 1:200 dilution and Sr, Li, Fe, Mn, and B with a 1:25 dilution in 1% nitric acid. An inductively coupled plasma mass spectrometry (ICP-MS)&nbsp;was used to analyze Rb, Cs, Ba, Mo, V and U with a 1:75 dilution in 3% nitric acid. Nutrients (silicate, phosphate, total nitrogen and nitrate) were measured at Oregon State University using standard colorimetric, automated, segmented flow procedures. Chlorinity was determined potentiometrically via titration with silver nitrate. Carbon analyses were conducted at Oregon State University</p>
Specified by the Principal Investigator(s)
<p>The data have not been processed further.</p>
<p>BCO-DMO Processing Notes:</p>
<p>* added a&nbsp;conventional header with dataset name, PI name, version date<br />
* modified parameter names to conform with BCO-DMO naming conventions<br />
* added lat, lon, and date of&nbsp;Alvin dives as listed in the&nbsp;<a href="http://www.whoi.edu/page.do?pid=11039" target="_blank">Alvin Dive Log&nbsp;</a></p>
Specified by the Principal Investigator(s)
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
syringe sample taken by Alvin
syringe sample taken by Alvin
PI Supplied Instrument Name: syringe sample taken by Alvin Instrument Name: Discrete water sampler Instrument Short Name: Instrument Description: A device that collects an in-situ discrete water sample from any depth and returns it to the surface without contamination by the waters through which it passes, such as a water bottle.
inductively coupled plasma mass spectrometry (ICP-MS)
inductively coupled plasma mass spectrometry (ICP-MS)
PI Supplied Instrument Name: inductively coupled plasma mass spectrometry (ICP-MS) Instrument Name: Inductively Coupled Plasma Mass Spectrometer Instrument Short Name:ICP Mass Spec Instrument Description: An ICP Mass Spec is an instrument that passes nebulized samples into an inductively-coupled gas plasma (8-10000 K) where they are atomized and ionized. Ions of specific mass-to-charge ratios are quantified in a quadrupole mass spectrometer. Community Standard Description: http://vocab.nerc.ac.uk/collection/L05/current/LAB15/
Inductively Coupled Plasma Optical Emission Spectrophotometer (ICPOES)
Inductively Coupled Plasma Optical Emission Spectrophotometer (ICPOES)
PI Supplied Instrument Name: Inductively Coupled Plasma Optical Emission Spectrophotometer (ICPOES) Instrument Name: Inductively Coupled Plasma Optical Emission Spectrometer Instrument Short Name:ICP-OES or ICP-AES Instrument Description: Also referred to as an Inductively coupled plasma atomic emission spectroscope (ICP-AES). These instruments pass nebulised samples into an inductively-coupled gas plasma (8-10000 K) where they are atomised and excited. The de-excitation optical emissions at characteristic wavelengths are spectroscopically analysed. It is often used in the detection of trace metals.
Cruise: AT26-24
AT26-24
R/V Atlantis
Community Standard Description
International Council for the Exploration of the Sea
R/V Atlantis
vessel
AT26-24
C. Geoffrey Wheat
University of Alaska Fairbanks
http://dmoserv3.whoi.edu/data_docs/C-DEBI/cruise_reports/AT26-24_Dorado_Outcrop_2014_Cruise_Report_reduced.pdf
Report describing AT26-24
R/V Atlantis
Community Standard Description
International Council for the Exploration of the Sea
R/V Atlantis
vessel