http://lod.bco-dmo.org/id/dataset/665727
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2016-11-22
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
Locations of Hawaiian reefs for larval dispersal model
2016-11-21
publication
2016-11-21
revision
BCO-DMO Linked Data URI
2016-11-21
creation
http://lod.bco-dmo.org/id/dataset/665727
Robert J. Toonen
University of Hawaiʻi at Mānoa
principalInvestigator
Brian Bowen
University of Hawaiʻi at Mānoa
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Toonen, R. J., Bowen, B. (2016) Locations of Hawaiian reefs for larval dispersal model. Biological and Chemical Oceanography Data Management Office (BCO-DMO). Version Date 2016-11-21 [if applicable, indicate subset used]. http://lod.bco-dmo.org/id/dataset/665727 [access date]
Locations of Hawaiian reefs for larval dispersal model Dataset Description: <p>You may access the data via the 'Map It' button at the top of this page or download the zipped files: <a href="http://dmoserv3.bco-dmo.org/data/toonen/Multispecies_Connectivity/HawaiiConnectivityFiles.zip">HawaiiConnectivityFiles.zip</a> (10 MB).</p>
<p><strong>Related Datasets:</strong><br />
<a href="https://www.bco-dmo.org/dataset/665467">Larval Dispersal Model: raw output</a><br />
<a href="https://www.bco-dmo.org/dataset/665742">Larval Dispersal Model: reef names</a></p>
<p><strong>Related References:</strong></p>
<p>Polovina JJ, Kleiber P, Kobayashi DR (1999) Application of TOPEX-POSEIDON satellite altimetry to simulate transport dynamics of larvae of spiny lobster, Panulirus marginatus, in the Northwestern Hawaiian Islands, 1993-1996. Fish Bull 97:132–143</p>
<p>Wren JLK, Kobayashi DR (2016) Exploration of the “larval pool”: development and ground-truthing of a larval transport model off leeward Hawai‘i. PeerJ 4:e1636</p>
<p>Detailed&nbsp;description of the methods:&nbsp;Wren, J.L.K., Kobayashi, D.R., Jia, Y. and Toonen R.J. (in revision) Modeled population connectivity in the Hawaiian Islands. PLoS ONE.</p> Methods and Sampling: <p>These data are output from a Lagrangian bio-physical particle tracking model coupled with the flow fields from the MITgcm simulation for the Hawaiian Archipelago (175°E to 150°W and from 15°N to 35°N at a 0.04° resolution). In the model, larvae are moved at each timestep by advective displacement caused by water flow combined with a random displacement caused by diffusion. Current velocities used by the model consist of daily snapshots of u (east) and v (north) velocities obtained from a regional implementation the MITgcm model. Eddy diffusivity was set to 250 m2/sec, consistent with drifters in Hawaiian waters. We released 50 particles daily from May 2, 2009, until April 10, 2014, from 687 coral reef habitat pixels representing of all emergent land in the model domain, totaling just over 62 million released particles for each model run. We used a pelagic larval duration (PLD) of 45 days and for a particle to be considered “settled”, it had to be within a 5 km radius of the center of a habitat pixel on the last day of its PLD. See Polovina et al. 1999 for a description of the model, and Wren and Kobayashi 2016 for modifications done to the model.&nbsp;</p>
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1260169 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1260169
completed
Robert J. Toonen
University of Hawaiʻi at Mānoa
808-236-7401
Hawaii Institute of Marine Biology 46-007 Lilipuna Rd
Kaneohe
HI
96744
USA
rjtoonen@gmail.com
pointOfContact
Brian Bowen
University of Hawaiʻi at Mānoa
808-236-7426
Hawaii Institute of Marine Biology 46-007 Lilipuna Road
Kaneohe
HI
96744
USA
bbowen@hawaii.edu
pointOfContact
asNeeded
Unknown
habitat_pixel_number
lat
lon
island_number
theme
None, User defined
No BCO-DMO term
latitude
longitude
Site_ID
featureType
BCO-DMO Standard Parameters
Toonen_model
service
Deployment Activity
Hawaiian reefs
place
Locations
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
Multispecies connectivity: Comparative analysis of marine connectivity and its drivers for the coral reefs of Hawaii
https://osprey.bco-dmo.org/project/552879
Multispecies connectivity: Comparative analysis of marine connectivity and its drivers for the coral reefs of Hawaii
<p><em>Description from NSF award abstract:</em><br />
The exchange of individuals among populations, termed connectivity, is a central element of population persistence and maintenance of genetic diversity, and influences most ecological and evolutionary processes. To date, field studies of marine connectivity have necessarily focused on one or a few species at a time, providing little understanding of both the extent of variability in connectivity across a whole community and what factors drive that variability. This project will address these questions with population genetic datasets of a diverse marine fauna sampled across the Hawaiian Archipelago. By combining these genetic data with extensive oceanographic, ecological and historical data, this project can potentially transform our understanding of the basis of the genetic structure of populations and the processes influencing genetic patterns. This project will provide unique, and new, knowledge to basic marine ecology and the science of Ecosystem Based Management while incorporating the latest analytical and simulation approaches.</p>
<p>The results will be novel on several fronts: 1) advancing our understanding of community genetics and associated statistical techniques; 2) achieving true integration of genetic, ecological and oceanographic data over large spatial scales for many species simultaneously using a World Heritage Site; the Hawaiian Papahânaumokuâkea Marine National Monument; 3) factoring historical effects into connectivity studies; and 4) providing information on the location of barriers to connectivity, the sources and sinks of individuals and the physical processes influencing ecological patterns at a community level. This project will result in a quantum leap for both the conceptual and empirical understanding of marine connectivity and the utility of population genetic data in basic and applied marine science.</p>
Multispecies Connectivity
largerWorkCitation
project
eng; USA
oceans
Hawaiian reefs
2016-11-21
Hawaiian Archipelago (approx. 154 deg 40' to 178 deg 25' W longitude and 18 deg 54' to 28 deg 15' N latitude)
0
BCO-DMO catalogue of parameters from Locations of Hawaiian reefs for larval dispersal model
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/665903.rdf
Name: habitat_pixel_number
Units: pixel
Description: <p>index from 1-687 that links lat/lon with the model output file's release and settlement habitat (site_settled and site_released in the model output files)</p>
http://lod.bco-dmo.org/id/dataset-parameter/665904.rdf
Name: lat
Units: decimal degrees
Description: <p>latitude of the habitat; north is positive</p>
http://lod.bco-dmo.org/id/dataset-parameter/665905.rdf
Name: lon
Units: decimal degrees
Description: <p>longitude of the habitat; east is positive</p>
http://lod.bco-dmo.org/id/dataset-parameter/665906.rdf
Name: island_number
Units: unitless
Description: <p>index from 1-32 that indicates what island the habitat is on. The name of the island is listed in the "reef names" file</p>
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
18862
https://datadocs.bco-dmo.org/file/DwwxDk8TB2ZvAK/latlon.csv
latlon.csv
Primary data file for dataset ID 665727
download
https://osprey.bco-dmo.org/dataset/665727/data/download
download
onLine
dataset
<p>These data are output from a Lagrangian bio-physical particle tracking model coupled with the flow fields from the MITgcm simulation for the Hawaiian Archipelago (175°E to 150°W and from 15°N to 35°N at a 0.04° resolution). In the model, larvae are moved at each timestep by advective displacement caused by water flow combined with a random displacement caused by diffusion. Current velocities used by the model consist of daily snapshots of u (east) and v (north) velocities obtained from a regional implementation the MITgcm model. Eddy diffusivity was set to 250 m2/sec, consistent with drifters in Hawaiian waters. We released 50 particles daily from May 2, 2009, until April 10, 2014, from 687 coral reef habitat pixels representing of all emergent land in the model domain, totaling just over 62 million released particles for each model run. We used a pelagic larval duration (PLD) of 45 days and for a particle to be considered “settled”, it had to be within a 5 km radius of the center of a habitat pixel on the last day of its PLD. See Polovina et al. 1999 for a description of the model, and Wren and Kobayashi 2016 for modifications done to the model.&nbsp;</p>
Specified by the Principal Investigator(s)
<p><strong>BCO-DMO Processing Notes:</strong><br />
- added conventional header with dataset name, PI name, version date<br />
- modified parameter names to conform with BCO-DMO naming</p>
Specified by the Principal Investigator(s)
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
Deployment: Toonen_model
Toonen_model
Hawaii_reef
shoreside
Toonen_model
Robert J. Toonen
University of Hawaiʻi at Mānoa
Hawaii_reef
shoreside