http://lod.bco-dmo.org/id/dataset/676537
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2017-01-26
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
The 13C/12C stable carbon isotopic ratio of the dissolved inorganic carbon from samples collected on the GEOTRACES EPZT cruise (R/V Thomas G. Thompson TN303) in the Eastern Tropical South Pacific from October to December 2013
2017-01-26
publication
2017-01-26
revision
Marine Biological Laboratory/Woods Hole Oceanographic Institution Library (MBLWHOI DLA)
2020-04-10
publication
https://doi.org/10.26008/1912/bco-dmo.676537.1
Paul Quay
University of Washington
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Quay, P. (2020) The 13C/12C stable carbon isotopic ratio of the dissolved inorganic carbon from samples collected on the GEOTRACES EPZT cruise (R/V Thomas G. Thompson TN303) in the Eastern Tropical South Pacific from October to December 2013. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2017-01-26 [if applicable, indicate subset used]. doi:10.26008/1912/bco-dmo.676537.1 [access date]
The 13C/12C stable carbon isotopic ratio of the dissolved inorganic carbon from samples collected on the GEOTRACES EPZT cruise Dataset Description: <p>The 13C/12C stable carbon isotopic ratio of the dissolved inorganic carbon from samples collected on the&nbsp;R/V Thomas G. Thompson cruise TN303 in the Eastern Tropical South Pacific (GEOTRACES EPZT).</p> Methods and Sampling: <p><strong>Shipboard Sample Collection Methods:&nbsp;</strong>Sampliing was done using&nbsp;the ODF CTD rosette (12 30L Niskins). Samples were collected in pre-washed and baked 250 ml ground glass stoppered bottles that were poisoned with 100 ul of a saturated HgCl2 solution. The stored sealed samples were returned to the Stable Isotope Laboratory at the University of Washington for extraction and measurement.</p>
<p><strong>Laboratory Methods:&nbsp;</strong>CO2 was extracted from the DIC seawater sample using a modification of the helium stripping technique described in Quay and Stutsman (2003). The del13C was&nbsp;measured on a Thermo Delta Plus XL mass spectrometer.</p>
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1233005 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1233005
completed
Paul Quay
University of Washington
206-685-8061
University of Washington School of Oceanography MS 355351
Seattle
WA
98195-7940
USA
pdquay@uw.edu
pointOfContact
asNeeded
Dataset Version: 1
Unknown
cruise_id
EXPOCODE
GEOTRC_INSTR
STNNBR
GEOTRC_SAMPNO
GEOTRC_EVENTNO
CASTNO
DIC_13_D_DELTA_BOTTLE
DIC_13_D_DELTA_BOTTLE_FLAG
SAMPNO
BTLNBR
BTLNBR_FLAG_W
ISO_DATETIME_UTC_START_EVENT
EVENT_LAT
EVENT_LON
BTL_ISO_DATETIME_UTC
BTL_LAT
BTL_LON
CTDDEPTH
Thermo Delta Plus XL mass spectrometer
theme
None, User defined
Cruise identfier
EXPOCODE
instrument
station
sample identification
event
cast
13C to 12C ratio in DIC
quality flag
bottle
flag
ISO_DateTime_UTC
latitude
longitude
depth
featureType
BCO-DMO Standard Parameters
Mass Spectrometer
Niskin bottle
instrument
BCO-DMO Standard Instruments
TN303
service
Deployment Activity
Eastern Tropical Pacific - Transect from Peru to Tahiti
place
Locations
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
U.S. GEOTRACES
http://www.geotraces.org/
U.S. GEOTRACES
GEOTRACES is a SCOR sponsored program; and funding for program infrastructure development is provided by the U.S. National Science Foundation.
GEOTRACES gained momentum following a special symposium, S02: Biogeochemical cycling of trace elements and isotopes in the ocean and applications to constrain contemporary marine processes (GEOSECS II), at a 2003 Goldschmidt meeting convened in Japan. The GEOSECS II acronym referred to the Geochemical Ocean Section Studies To determine full water column distributions of selected trace elements and isotopes, including their concentration, chemical speciation, and physical form, along a sufficient number of sections in each ocean basin to establish the principal relationships between these distributions and with more traditional hydrographic parameters;
* To evaluate the sources, sinks, and internal cycling of these species and thereby characterize more completely the physical, chemical and biological processes regulating their distributions, and the sensitivity of these processes to global change; and
* To understand the processes that control the concentrations of geochemical species used for proxies of the past environment, both in the water column and in the substrates that reflect the water column.
GEOTRACES will be global in scope, consisting of ocean sections complemented by regional process studies. Sections and process studies will combine fieldwork, laboratory experiments and modelling. Beyond realizing the scientific objectives identified above, a natural outcome of this work will be to build a community of marine scientists who understand the processes regulating trace element cycles sufficiently well to exploit this knowledge reliably in future interdisciplinary studies.
Expand "Projects" below for information about and data resulting from individual US GEOTRACES research projects.
U.S. GEOTRACES
largerWorkCitation
program
U.S. GEOTRACES East Pacific Zonal Transect (GP16)
http://www.geotraces.org/
U.S. GEOTRACES East Pacific Zonal Transect (GP16)
<p><strong>From the NSF Award Abstract</strong><br />
The mission of the International GEOTRACES Program (<a href="https://www.geotraces.org/" target="_blank">https://www.geotraces.org/</a>), of which the U.S. chemical oceanography research community is a founding member, is "to identify processes and quantify fluxes that control the distributions of key trace elements and isotopes in the ocean, and to establish the sensitivity of these distributions to changing environmental conditions" (GEOTRACES Science Plan, 2006). In the United States, ocean chemists are currently in the process of organizing a zonal transect in the eastern tropical South Pacific (ETSP) from Peru to Tahiti as the second cruise of the U.S.GEOTRACES Program. This Pacific section includes a large area characterized by high rates of primary production and particle export in the eastern boundary associated with the Peru Upwelling, a large oxygen minimum zone that is a major global sink for fixed nitrogen, and a large hydrothermal plume arising from the East Pacific Rise. This particular section was selected as a result of open planning workshops in 2007 and 2008, with a final recommendation made by the U.S.GEOTRACES Steering Committee in 2009. It is the first part of a two-stage plan that will include a meridional section of the Pacific from Tahiti to Alaska as a subsequent expedition.</p>
<p>This award provides funding for management of the U.S.GEOTRACES Pacific campaign to a team of scientists from the University of Southern California, Old Dominion University, and the Woods Hole Oceanographic Institution. The three co-leaders will provide mission leadership, essential support services, and management structure for acquiring the trace elements and isotopes samples listed as core parameters in the International GEOTRACES Science Plan, plus hydrographic and nutrient data needed by participating investigators. With this support from NSF, the management team will (1) plan and coordinate the 52-day Pacific research cruise described above; (2) obtain representative samples for a wide variety of trace metals of interest using conventional CTD/rosette and GEOTRACES Sampling Systems; (3) acquire conventional JGOFS/WOCE-quality hydrographic data (CTD, transmissometer, fluorometer, oxygen sensor, etc) along with discrete samples for salinity, dissolved oxygen (to 1 uM detection limits), plant pigments, redox tracers such as ammonium and nitrite, and dissolved nutrients at micro- and nanomolar levels; (4) ensure that proper QA/QC protocols are followed and reported, as well as fulfilling all GEOTRACES Intercalibration protocols; (5) prepare and deliver all hydrographic-type data to the GEOTRACES Data Center (and US data centers); and (6) coordinate cruise communications between all participating investigators, including preparation of a hydrographic report/publication.</p>
<p>Broader Impacts: The project is part of an international collaborative program that has forged strong partnerships in the intercalibration and implementation phases that are unprecedented in chemical oceanography. The science product of these collective missions will enhance our ability to understand how to interpret the chemical composition of the ocean, and interpret how climate change will affect ocean chemistry. Partnerships include contributions to the infrastructure of developing nations with overlapping interests in the study area, in this case Peru. There is a strong educational component to the program, with many Ph.D. students carrying out thesis research within the program.</p>
<p><em>Figure 1. The 2013 GEOTRACES EPZT Cruise Track. [click on the image to view a larger version]</em><br />
<a href="http://dmoserv3.whoi.edu/data_docs/GEOTRACES/EPZT/GEOTRACES_EPZT_TN303_CruiseTrack.png" target="_blank"><img alt="" src="https://datadocs.bco-dmo.org/d3/data_docs/GEOTRACES/EPZT/GEOTRACES_EPZT_TN303_CruiseTrack.png" /></a></p>
U.S. GEOTRACES EPZT
largerWorkCitation
project
US GEOTRACES Pacific: Measuring the d13C-DIC distribution and quantifying the impact of organic matter export on d13C, nutrients and trace metals
https://osprey.bco-dmo.org/project/674971
US GEOTRACES Pacific: Measuring the d13C-DIC distribution and quantifying the impact of organic matter export on d13C, nutrients and trace metals
<p><em>Text from the NSF award abstract:</em></p>
<p>The international GEOTRACES program has two major goals: (1) to determine global ocean distributions of selected trace elements and isotopes and evaluate the sources, sinks, and internal cycling of these species to characterize more completely the physical, chemical and biological processes regulating their distributions; and (2) to understand the processes that control the concentrations of geochemical species used for proxies of the past environment. Because the cycling of trace elements and isotopes in the sea is intimately connected with both the organic and the inorganic biogeochemical transformations of carbon, the achievement of the goals of GEOTRACES would be very difficult if not impossible unless synoptic measurements are also made on the organic and inorganic marine carbon system.</p>
<p>In this project, researchers at the University of Washington will participate in the U.S.GEOTRACES Pacific campaign in 2013 to characterize the regional ocean carbon system. They will use two approaches. First, they will measure the depth distribution of the 13C/12C stable carbon isotopic ratio of the dissolved inorganic carbon (del13C), which has been designated in the international GEOTRACES Science Plan as a key parameter and has the highest measurement priority. Second, they will estimate the rate of organic matter (OM) export from the surface layer based on dissolved O2/Ar gas ratios. Measurements of del13C will be made at about 22 stations for a total of ~525 samples. Additionally, they will measure the dissolved O2/Ar gas ratio at ~5 km spatial resolution in the surface layer using an underway measurement method that has been used extensively in other oceanic regions.</p>
<p>The cruise track will cross a wide range of biological productivity regimes from the coastal upwelling zone off Peru to the oligotrophic gyre surrounding Tahiti. The proposed high resolution O2/Ar-based OM export rates should clearly detect the expected offshore decrease in OM export and locate transition zones or fronts in productivity. The expected large offshore productivity gradient will provide the opportunity to determine the impact of OM export from the surface layer and OM degradation at depth on upper ocean depth distribution of del13C, trace elements (TEs), O2 and nutrients along the section.</p>
<p>The initial del13C and TE measurements during GEOTRACES illustrate the potential to improve our understanding of the processes that control del13C, TEs and nutrient distributions in the modern ocean and, as a result, improve the utility of del13C and TEs as tracers of past changes in the ocean circulation and carbon cycling, which is a long term goal of this research.</p>
<p>Broader Impacts. The data and research results will be broadly distributed to the international oceanographic and paleoclimate communities and incorporated into the PI's graduate and undergraduate teaching curricula. Additionally, there will be active undergraduate participation (5 students currently) in preparing samples for del13C analyses.</p>
EPZT d13C-DIC
largerWorkCitation
project
eng; USA
oceans
Eastern Tropical Pacific - Transect from Peru to Tahiti
-152.0005
-77.37617
-16.00067
-10.50017
2013-10-29
2013-12-18
From projects that focused on the following 2 locations: 1. Eastern Tropical Pacific - Transect from Peru to Tahiti (GP16) 2. Eastern Tropical Pacific
0
BCO-DMO catalogue of parameters from The 13C/12C stable carbon isotopic ratio of the dissolved inorganic carbon from samples collected on the GEOTRACES EPZT cruise (R/V Thomas G. Thompson TN303) in the Eastern Tropical South Pacific from October to December 2013
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/676553.rdf
Name: cruise_id
Units: unitless
Description: <p>Cruise identification</p>
http://lod.bco-dmo.org/id/dataset-parameter/676554.rdf
Name: EXPOCODE
Units: unitless
Description: <p>Cruise EXPO code.</p>
http://lod.bco-dmo.org/id/dataset-parameter/676555.rdf
Name: GEOTRC_INSTR
Units: unitless
Description: <p>Sampling instrument; added from BCO-DMO EPZT master events file.</p>
http://lod.bco-dmo.org/id/dataset-parameter/676556.rdf
Name: STNNBR
Units: unitless
Description: <p>Station number</p>
http://lod.bco-dmo.org/id/dataset-parameter/676557.rdf
Name: GEOTRC_SAMPNO
Units: unitless
Description: <p>Unique GEOTRACES sample number</p>
http://lod.bco-dmo.org/id/dataset-parameter/676558.rdf
Name: GEOTRC_EVENTNO
Units: unitless
Description: <p>GEOTRACES event number</p>
http://lod.bco-dmo.org/id/dataset-parameter/676559.rdf
Name: CASTNO
Units: unitless
Description: <p>Cast number</p>
http://lod.bco-dmo.org/id/dataset-parameter/676560.rdf
Name: DIC_13_D_DELTA_BOTTLE
Units: per mil
Description: <p>d13C-DIC; Carbon 13 to Carbon 12 ratio of DIC: 1000*[(13C/12C)sample - (13C/12C)standard]/ (13C/12C)standard. Reported in units of per mil.</p>
http://lod.bco-dmo.org/id/dataset-parameter/676561.rdf
Name: DIC_13_D_DELTA_BOTTLE_FLAG
Units: unitless
Description: <p>Quality flag for DIC_13_D_DELTA_BOTTLE. 2 = good data; 3 = questionable data; 9 = no data.</p>
http://lod.bco-dmo.org/id/dataset-parameter/676562.rdf
Name: SAMPNO
Units: unitless
Description: <p>Sequential sample number within the cast (usually corresponds to bottle number).</p>
http://lod.bco-dmo.org/id/dataset-parameter/676563.rdf
Name: BTLNBR
Units: unitless
Description: <p>Bottle number; typically 1-24.</p>
http://lod.bco-dmo.org/id/dataset-parameter/676564.rdf
Name: BTLNBR_FLAG_W
Units: unitless
Description: <p>Bottle number quality flag; follows WOCE conventions. 2 = good; 3 = questionable; 4 = bad; 9 = missing data.</p>
http://lod.bco-dmo.org/id/dataset-parameter/676565.rdf
Name: ISO_DATETIME_UTC_START_EVENT
Units: unitless
Description: <p>Date and time, formatted to the ISO 8601 standard, at the start of the sampling event, according to the event log. Format: YYYY-MM-DDTHH:MM:SS[.xx]Z. Added from BCO-DMO EPZT master events file.</p>
http://lod.bco-dmo.org/id/dataset-parameter/676566.rdf
Name: EVENT_LAT
Units: decimal degrees
Description: <p>Latitude at the start of the event; north is positive; added from BCO-DMO EPZT master events file.</p>
http://lod.bco-dmo.org/id/dataset-parameter/676567.rdf
Name: EVENT_LON
Units: decimal degrees
Description: <p>Longitude at the start of the event; east is positive; added from BCO-DMO EPZT master events file.</p>
http://lod.bco-dmo.org/id/dataset-parameter/676568.rdf
Name: BTL_ISO_DATETIME_UTC
Units: unitless
Description: <p>Date and time, formatted to the ISO 8601 standard, at the time of bottle firing. Format: YYYY-MM-DDTHH:MM:SS[.xx]Z. Added from BCO-DMO EPZT master events file.</p>
http://lod.bco-dmo.org/id/dataset-parameter/676569.rdf
Name: BTL_LAT
Units: decimal degrees
Description: <p>Latitude of bottle firing; north is positive. Added from BCO-DMO EPZT master events file.</p>
http://lod.bco-dmo.org/id/dataset-parameter/676570.rdf
Name: BTL_LON
Units: decimal degrees
Description: <p>Lonitude of bottle firing; east is positive. Added from BCO-DMO EPZT master events file.</p>
http://lod.bco-dmo.org/id/dataset-parameter/676574.rdf
Name: CTDDEPTH
Units: meters
Description: <p>CTD bottle firing depth obtained from the CTD bottle files; added from BCO-DMO EPZT master events file.</p>
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
70616
https://darchive.mblwhoilibrary.org/bitstream/1912/25632/1/dataset-676537_gp16-d13c-dic__v1.tsv
download
https://doi.org/10.26008/1912/bco-dmo.676537.1
download
onLine
dataset
<p><strong>Shipboard Sample Collection Methods:&nbsp;</strong>Sampliing was done using&nbsp;the ODF CTD rosette (12 30L Niskins). Samples were collected in pre-washed and baked 250 ml ground glass stoppered bottles that were poisoned with 100 ul of a saturated HgCl2 solution. The stored sealed samples were returned to the Stable Isotope Laboratory at the University of Washington for extraction and measurement.</p>
<p><strong>Laboratory Methods:&nbsp;</strong>CO2 was extracted from the DIC seawater sample using a modification of the helium stripping technique described in Quay and Stutsman (2003). The del13C was&nbsp;measured on a Thermo Delta Plus XL mass spectrometer.</p>
Specified by the Principal Investigator(s)
<p><strong>Data quality flag definitions:</strong><br />
2 = good data;<br />
3 = questionable data;<br />
9 = no data.</p>
<p><strong>BCO-DMO Processing:</strong><br />
- modified parameter names to conform with BCO-DMO and GEOTRACES naming conventions;<br />
- joined to BCO-DMO master EPZT events file and removed duplicate/unnecessary columns.</p>
<p><strong>Additional GEOTRACES Processing:</strong><br />
As was done for the GEOTRACES-NAT data, BCO-DMO added standard US GEOTRACES information, such as the US GEOTRACES event number, to each submitted dataset lacking this information. To accomplish this, BCO-DMO compiled a 'master' dataset composed of the following parameters:</p>
<p>cruise_id, EXPOCODE,SECT_ID, STNNBR, CASTNO, GEOTRC_EVENTNO, GEOTRC_SAMPNO, GEOTRC_INSTR, SAMPNO, GF_NO, BTLNBR, BTLNBR_FLAG_W, DATE_START_EVENT, TIME_START_EVENT, ISO_DATETIME_UTC_START_EVENT, EVENT_LAT, EVENT_LON, DEPTH_MIN, DEPTH_MAX, &nbsp;BTL_DATE, BTL_TIME, BTL_ISO_DATETIME_UTC, BTL_LAT, BTL_LON, ODF_CTDPRS, SMDEPTH, FMDEPTH, BTMDEPTH, CTDPRS, CTDDEPTH.</p>
<p>This added information will facilitate subsequent analysis and inter comparison of the datasets.</p>
<p>Bottle parameters in the master file were taken from the GT-C_Bottle and ODF_Bottle datasets. Non-bottle parameters, including those from GeoFish tows, Aerosol sampling, and McLane Pumps, were taken from the TN303 Event Log (version 30 Oct 2014). Where applicable, pump information was taken from the PUMP_Nuts_Sals dataset.</p>
<p>A standardized BCO-DMO method (called "join") was then used to merge the missing parameters to each US GEOTRACES dataset, most often by matching on sample_GEOTRC or on some unique combination of other parameters.</p>
<p>If the master parameters were included in the original data file and the values did not differ from the master file, the original data columns were retained and the names of the parameters were changed from the PI-submitted names to the standardized master names. If there were differences between the PI-supplied parameter values and those in the master file, both columns were retained. If the original data submission included all of the master parameters, no additional columns were added, but parameter names were modified to match the naming conventions of the master file.</p>
<p>See the dataset parameters documentation for a description of which parameters were supplied by the PI and which were added via the join method.</p>
Specified by the Principal Investigator(s)
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
Thermo Delta Plus XL mass spectrometer
Thermo Delta Plus XL mass spectrometer
PI Supplied Instrument Name: Thermo Delta Plus XL mass spectrometer PI Supplied Instrument Description:The del13C is measured on a Thermo Delta Plus XL mass spectrometer. Instrument Name: Mass Spectrometer Instrument Short Name:Mass Spec Instrument Description: General term for instruments used to measure the mass-to-charge ratio of ions; generally used to find the composition of a sample by generating a mass spectrum representing the masses of sample components. Community Standard Description: http://vocab.nerc.ac.uk/collection/L05/current/LAB16/
PI Supplied Instrument Name: PI Supplied Instrument Description:Samples were collected by the ODF CTD rosette (12 30L Niskins). Instrument Name: Niskin bottle Instrument Short Name:Niskin bottle Instrument Description: A Niskin bottle (a next generation water sampler based on the Nansen bottle) is a cylindrical, non-metallic water collection device with stoppers at both ends. The bottles can be attached individually on a hydrowire or deployed in 12, 24, or 36 bottle Rosette systems mounted on a frame and combined with a CTD. Niskin bottles are used to collect discrete water samples for a range of measurements including pigments, nutrients, plankton, etc. Community Standard Description: http://vocab.nerc.ac.uk/collection/L22/current/TOOL0412/
Cruise: TN303
TN303
R/V Thomas G. Thompson
Community Standard Description
International Council for the Exploration of the Sea
R/V Thomas G. Thompson
vessel
TN303
James W. Moffett
University of Southern California
http://dmoserv3.whoi.edu/data_docs/GEOTRACES/EPZT/GT13_EPZT_ODFReport_All.pdf
Report describing TN303
R/V Thomas G. Thompson
Community Standard Description
International Council for the Exploration of the Sea
R/V Thomas G. Thompson
vessel