http://lod.bco-dmo.org/id/dataset/686893
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2017-04-04
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
Growth of larval clownfish, Amphiprion ocellaris used in predator-prey experiment (PreyEscape project)
2017-04-04
publication
2017-04-04
revision
BCO-DMO Linked Data URI
2017-04-04
creation
http://lod.bco-dmo.org/id/dataset/686893
Petra H. Lenz
University of Hawaiʻi at Mānoa
principalInvestigator
Daniel K. Hartline
University of Hawaiʻi at Mānoa
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Lenz, P. H., Hartline, D. K. (2017) Growth of larval clownfish, Amphiprion ocellaris used in predator-prey experiment (PreyEscape project). Biological and Chemical Oceanography Data Management Office (BCO-DMO). Version Date 2017-04-04 [if applicable, indicate subset used]. http://lod.bco-dmo.org/id/dataset/686893 [access date]
Total length and mouth gape size for larval clownfish Dataset Description: <p>This dataset includes the total length and mouth gape size for larval clownfish (<em>Amphiprion </em><em>ocellaris</em>) between 1 and 14 days post-hatch.</p>
<p><strong>Related Reference:</strong><br />
Jackson, J. M. and Lenz, P. H. (2016). Predator-prey interactions in the plankton: larval fish feeding on evasive copepods. Scientific Reports, 6, 33585; doi: <a href="http://www.nature.com/articles/srep33585" target="_blank">10.1038/srep33585</a>.</p> Methods and Sampling: <p>All experiments were approved by the University of Hawaii’s Institutional Animal Care &amp; Use Committee (IACUC) under protocol #1045. For determination of growth, larval <em>Amphiprion </em><em>ocellaris</em> were euthanized using a solution of 0.06 g/ml Ethyl 3-aminobenzoate methanesulfonate salt (MS222) (Sigma-Aldrich Inc., Saint Louis, MO, USA; catalog no. A5040-25G), preserved in a solution of 5% formalin in seawater, and measured for total length and jaw size within one week of fixation.</p>
<p>Total length, a metric commonly used for clownfish larvae, is the greatest straight-line distance measured between the most anterior and posterior points of the body.&nbsp; Measurements of fish larvae were made using a reticle calibrated with a 2.0 mm microscope micrometer at 12x for total length and 100x for mouth gape (Wild model M5A dissecting microscope).&nbsp; Upper jaw lengths were measured from the anterior-most point of the pre-maxilla to the posterior edge of the maxilla. Lower jaw lengths were measured from anterior-most part of the mandible to its&nbsp;posterior edge.&nbsp; Mouth gape was determined using Pythagorean theorem, assuming that the jaws represent two sides of a right triangle and the hypotenuse is the expected mouth gape.</p>
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1235549 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1235549
completed
Petra H. Lenz
University of Hawaiʻi at Mānoa
808-956-8003
Pacific Biosciences Research Center (PBRC), Bekesy Laboratory of Neurobiology 1993 East-West Road
Honolulu
HI
96822
United States
petra@hawaii.edu
pointOfContact
Daniel K. Hartline
University of Hawaiʻi at Mānoa
808-956-8003
Pacific Biosciences Research Center 1993 East-West Rd.
Honolulu
HI
96822
USA
danh@pbrc.hawaii.edu
pointOfContact
asNeeded
Unknown
larva_age
mouth_gape
length_total
Wild model M5A dissecting microscope
theme
None, User defined
age
length
featureType
BCO-DMO Standard Parameters
Microscope - Optical
instrument
BCO-DMO Standard Instruments
PredatorSuccess_2016
service
Deployment Activity
University of Hawaii at Manoa lab
place
Locations
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
The Drive to Survive: Copepods vs Ichthyoplankton
https://osprey.bco-dmo.org/project/562097
The Drive to Survive: Copepods vs Ichthyoplankton
<p><em>Description from NSF award abstract:</em><br />
This study will experimentally elucidate the dynamics of predator evasion by different species and life stages of copepod responding to a model larval fish predator. The PIs will use standard and high-speed videographic and cutting-edge holographic techniques. Predator-prey interactions within planktonic communities are key to understanding how energy is transferred within complex marine food webs. Of particular interest are those between the highly numerous copepods and one of their more important predators, the ichthyoplankton (the planktonic larval stages of fishes). The larvae of most fishes are planktivorous and heavily dependent on copepods for food. In general, evasion success increases with age in copepods and decreases with the age of the fish predator. How this plays out in detail is critical in determining predatory attack outcomes and the effect these have on predator and prey survival. To address this problem, different copepod developmental stages will be tested against several levels of predator competence, and the results examined for: 1) the success or failure of attacks for different combinations of predator and prey age class; 2) the kinematics (reaction latencies and trajectory orientation) for escape attempts, successful and unsuccessful, for different age classes of copepod; 3) the hydrodynamic cues generated by different ages and attack strategies of the predator and the sensitivity of different prey stages to these cues; and 4) the success or failure of the predatory approach and attack strategies at each prey stage. The data obtained will be used to inform key issues of zooplankton population dynamics. For the prey these include: predator-evasion capabilities and importance of detection ability, reaction speed, escape speed, escape orientation, and trajectory irregularity; for the predator they are: capabilities and importance of mouth gape size, stealthiness, hydrodynamic disturbance production, and lunge kinematics.</p>
PreyEscape
largerWorkCitation
project
eng; USA
biota
oceans
University of Hawaii at Manoa lab
-157.8197
-157.8197
21.3
21.3
2017-04-04
Pacific
0
BCO-DMO catalogue of parameters from Growth of larval clownfish, Amphiprion ocellaris used in predator-prey experiment (PreyEscape project)
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/686903.rdf
Name: larva_age
Units: days
Description: <p>larval age post-hatch</p>
http://lod.bco-dmo.org/id/dataset-parameter/686904.rdf
Name: mouth_gape
Units: millimeters
Description: <p>size of mouth-gape: Upper jaw lengths were measured from the anterior-most point of the pre-maxilla to the posterior edge of the maxilla. Lower jaw lengths were measured from anterior-most part of the mandible to it posterior edge. Mouth gape was determined using Pythagorean theorem - assuming that the jaws represent two sides of a right triangle and the hypotenuse is the expected mouth gape.</p>
http://lod.bco-dmo.org/id/dataset-parameter/686905.rdf
Name: length_total
Units: millimeters
Description: <p>larval fiah length</p>
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
816
https://datadocs.bco-dmo.org/file/4WW2j85FlA3jKG/clownfish_growth.csv
clownfish_growth.csv
Primary data file for dataset ID 686893
download
https://osprey.bco-dmo.org/dataset/686893/data/download
download
onLine
dataset
<p>All experiments were approved by the University of Hawaii’s Institutional Animal Care &amp; Use Committee (IACUC) under protocol #1045. For determination of growth, larval <em>Amphiprion </em><em>ocellaris</em> were euthanized using a solution of 0.06 g/ml Ethyl 3-aminobenzoate methanesulfonate salt (MS222) (Sigma-Aldrich Inc., Saint Louis, MO, USA; catalog no. A5040-25G), preserved in a solution of 5% formalin in seawater, and measured for total length and jaw size within one week of fixation.</p>
<p>Total length, a metric commonly used for clownfish larvae, is the greatest straight-line distance measured between the most anterior and posterior points of the body.&nbsp; Measurements of fish larvae were made using a reticle calibrated with a 2.0 mm microscope micrometer at 12x for total length and 100x for mouth gape (Wild model M5A dissecting microscope).&nbsp; Upper jaw lengths were measured from the anterior-most point of the pre-maxilla to the posterior edge of the maxilla. Lower jaw lengths were measured from anterior-most part of the mandible to its&nbsp;posterior edge.&nbsp; Mouth gape was determined using Pythagorean theorem, assuming that the jaws represent two sides of a right triangle and the hypotenuse is the expected mouth gape.</p>
Specified by the Principal Investigator(s)
<p><strong>BCO-DMO Processing Notes:</strong><br />
- added conventional header with dataset name, PI name, version date<br />
- modified parameter names to conform with BCO-DMO naming conventions</p>
Specified by the Principal Investigator(s)
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
Wild model M5A dissecting microscope
Wild model M5A dissecting microscope
PI Supplied Instrument Name: Wild model M5A dissecting microscope PI Supplied Instrument Description:To measure fish length and mouth jaw length Instrument Name: Microscope - Optical Instrument Short Name: Instrument Description: Instruments that generate enlarged images of samples using the phenomena of reflection and absorption of visible light. Includes conventional and inverted instruments. Also called a "light microscope". Community Standard Description: http://vocab.nerc.ac.uk/collection/L05/current/LAB05/
Deployment: PredatorSuccess_2016
PredatorSuccess_2016
Lenz_lab
laboratory
PredatorSuccess_2016
Petra H. Lenz
University of Hawaiʻi at Mānoa
Lenz_lab
laboratory