http://lod.bco-dmo.org/id/dataset/708495
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2017-07-12
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
R/V Falkor 160115 McLane pump log from the ProteOMZ expedition in the Central Pacific during 2016 (ProteOMZ project)
2024-10-21
publication
2024-10-21
revision
Marine Biological Laboratory/Woods Hole Oceanographic Institution Library (MBLWHOI DLA)
2024-11-06
publication
https://doi.org/10.26008/1912/bco-dmo.708495.3
Mak A. Saito
Woods Hole Oceanographic Institution
principalInvestigator
Alyson E. Santoro
University of California-Santa Barbara
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Saito, M. A., Santoro, A. E. (2024) R/V Falkor 160115 McLane pump log from the ProteOMZ expedition in the Central Pacific during 2016 (ProteOMZ project). Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 3) Version Date 2024-10-21 [if applicable, indicate subset used]. doi:10.26008/1912/bco-dmo.708495.3 [access date]
R/V Falkor 160115 McLane log from the ProteOMZ expedition in the Central Pacific. Dataset Description: Methods and Sampling: <p>R/V Falkor 160115 McLane log data.</p>
<p>Sampling was conducted using a McLane Pump, or Surface Pump.</p>
Funding provided by Gordon and Betty Moore Foundation: Marine Microbiology Initiative (MMI) Award Number: GBMF3782 Award URL: https://www.moore.org/grant-detail?grantId=GBMF3782
Funding provided by Alfred P. Sloan Foundation (Sloan) Award Number: Unknown ProteOMZ Sloan Foundation
Funding provided by Schmidt Ocean Institute (SOI) Award Number: R/V Falkor 160115 SOI ProteOMZ Expedition
completed
Mak A. Saito
Woods Hole Oceanographic Institution
508-289-2393
266 Woods Hole Rd. MS #51 Watson Lab
Woods Hole
MA
02543
USA
msaito@whoi.edu
pointOfContact
Alyson E. Santoro
University of California-Santa Barbara
805-893-5318
2155 Marine Biotech Lab
Santa Barbara
CA
93106
USA
asantoro@ucsb.edu
pointOfContact
asNeeded
Dataset Version: 3
Unknown
cruise
station
date
time
lat
lon
cast
pump_serial_num
pump_num
filter_stand
depth
pump_start_time
set_pump_time
GFF_flow_meter_volume
supor_flow_meter_volume
total_start
added_total_of_supor_and_GFF
total_end
difference
pump_msg
notes
ISO_DateTime_UTC
McLane
Surface pump
theme
None, User defined
Cruise identfier
station
date
time of day
latitude
longitude
cast
sample identification
No BCO-DMO term
depth
time begin
comments
ISO_DateTime_UTC
featureType
BCO-DMO Standard Parameters
McLane Pump
Pump surface
instrument
BCO-DMO Standard Instruments
FK160115
service
Deployment Activity
Central Pacific
place
Locations
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
The ProteOMZ Expedition: Investigating Life Without Oxygen in the Pacific Ocean
https://schmidtocean.org/cruise/investigating-life-without-oxygen-in-the-tropical-pacific/#team
The ProteOMZ Expedition: Investigating Life Without Oxygen in the Pacific Ocean
<p>From Schmidt Ocean Institute's ProteOMZ Project page:</p>
<p>Rising temperatures, ocean acidification, and overfishing have now gained widespread notoriety as human-caused phenomena that are changing our seas. In recent years, scientists have increasingly recognized that there is yet another ingredient in that deleterious mix: a process called deoxygenation that results in less oxygen available in our seas.</p>
<p>Large-scale ocean circulation naturally results in low-oxygen areas of the ocean called oxygen deficient zones (ODZs). The cycling of carbon and nutrients – the foundation of marine life, called biogeochemistry – is fundamentally different in ODZs than in oxygen-rich areas. Because researchers think deoxygenation will greatly expand the total area of ODZs over the next 100 years, studying how these areas function now is important in predicting and understanding the oceans of the future. This first expedition of 2016 led by Dr. Mak Saito from the Woods Hole Oceanographic Institution (WHOI) along with scientists from University of Maryland Center for Environmental Science, University of California Santa Cruz, and University of Washington aimed to do just that, investigate ODZs.</p>
<p>During the 28 day voyage named “ProteOMZ,” researchers aboard R/V <em>Falkor </em>traveled from Honolulu, Hawaii to Tahiti to describe the biogeochemical processes that occur within this particular swath of the ocean’s ODZs. By doing so, they contributed to our greater understanding of ODZs, gathered a database of baseline measurements to which future measurements can be compared, and established a new methodology that could be used in future research on these expanding ODZs.</p>
ProteOMZ (Proteomics in an Oxygen Minimum Zone)
largerWorkCitation
project
eng; USA
oceans
Central Pacific
-156.9507
-138.6914
-10.5
10
2016-01-19
2016-02-04
Central Pacific Ocean (Hawaii to Tahiti)
0
BCO-DMO catalogue of parameters from R/V Falkor 160115 McLane pump log from the ProteOMZ expedition in the Central Pacific during 2016 (ProteOMZ project)
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/940750.rdf
Name: cruise
Units: unitless
Description: <p>Cruise name</p>
http://lod.bco-dmo.org/id/dataset-parameter/940751.rdf
Name: station
Units: unitless
Description: <p>Station number</p>
http://lod.bco-dmo.org/id/dataset-parameter/940752.rdf
Name: date
Units: unitless
Description: <p>Date of sampling in format yyyy-mm-dd</p>
http://lod.bco-dmo.org/id/dataset-parameter/940753.rdf
Name: time
Units: unitless
Description: <p>Local time of sampling; HH:MM</p>
http://lod.bco-dmo.org/id/dataset-parameter/940754.rdf
Name: lat
Units: decimal degrees
Description: <p>Latitude; N is positive</p>
http://lod.bco-dmo.org/id/dataset-parameter/940755.rdf
Name: lon
Units: decimal degrees
Description: <p>Longitude; E is positive</p>
http://lod.bco-dmo.org/id/dataset-parameter/940756.rdf
Name: cast
Units: unitless
Description: <p>Cast ID number</p>
http://lod.bco-dmo.org/id/dataset-parameter/940757.rdf
Name: pump_serial_num
Units: unitless
Description: <p>Pump serial number; manufactorer issued</p>
http://lod.bco-dmo.org/id/dataset-parameter/940758.rdf
Name: pump_num
Units: unitless
Description: <p>Pump ID number; PI issued</p>
http://lod.bco-dmo.org/id/dataset-parameter/940759.rdf
Name: filter_stand
Units: unitless
Description: <p>Filter stand ID number</p>
http://lod.bco-dmo.org/id/dataset-parameter/940760.rdf
Name: depth
Units: meters
Description: <p>Sample depth</p>
http://lod.bco-dmo.org/id/dataset-parameter/940761.rdf
Name: pump_start_time
Units: unitless
Description: <p>Pump start time; HH:MM</p>
http://lod.bco-dmo.org/id/dataset-parameter/940762.rdf
Name: set_pump_time
Units: minutes
Description: <p>Programmed set time for pump</p>
http://lod.bco-dmo.org/id/dataset-parameter/940763.rdf
Name: GFF_flow_meter_volume
Units: liters
Description: <p>GFF flow meter total volume</p>
http://lod.bco-dmo.org/id/dataset-parameter/940764.rdf
Name: supor_flow_meter_volume
Units: liters
Description: <p>Supor flow meter total volume</p>
http://lod.bco-dmo.org/id/dataset-parameter/940765.rdf
Name: total_start
Units: liters
Description: <p>Combined flow meter total at start</p>
http://lod.bco-dmo.org/id/dataset-parameter/940766.rdf
Name: added_total_of_supor_and_GFF
Units: liters
Description: <p>Added total of flow meter volumes</p>
http://lod.bco-dmo.org/id/dataset-parameter/940767.rdf
Name: total_end
Units: liters
Description: <p>Combined flow meter total at end</p>
http://lod.bco-dmo.org/id/dataset-parameter/940768.rdf
Name: difference
Units: liters
Description: <p>Difference in total start and end values</p>
http://lod.bco-dmo.org/id/dataset-parameter/940769.rdf
Name: pump_msg
Units: unitless
Description: <p>Pump messages received</p>
http://lod.bco-dmo.org/id/dataset-parameter/940770.rdf
Name: notes
Units: unitless
Description: <p>Notes</p>
http://lod.bco-dmo.org/id/dataset-parameter/940771.rdf
Name: ISO_DateTime_UTC
Units: unitless
Description: <p>Timestamp (UTC) in standard ISO 8601:2004(E) format YYYY-mm-ddTHH:MMZ</p>
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
17302
https://darchive.mblwhoilibrary.org/server/api/core/bitstreams/62d3e8a8-e1a6-4839-8423-4705c61d582a/content
download
https://doi.org/10.26008/1912/bco-dmo.708495.3
download
onLine
dataset
<p>R/V Falkor 160115 McLane log data.</p>
<p>Sampling was conducted using a McLane Pump, or Surface Pump.</p>
Specified by the Principal Investigator(s)
>BCO-DMO Data Processing Notes:
- reformatted column names to comply with BCO-DMO standards.
- replaced spaces in column names with underscores.
- removed special characters from column names.
- removed units from column names.
Data version 2:2018-11-20 was an intermediate revision replacing data version 1:2017-09-07 correcting issues with lat/lon values.
Data version 3:2018-12-17 replaces data version 2: 2018-11-20 with changes made after communication with data contributor.
* lat/lon issues corrected. lon values > 360 converted to the equivalent in 180 max format. All long values made negative (verified against cruise track from R2R).
* added columns for max/min filter sizes and ISO_DateTime_UTC.
* Time format was inconsistent and contained HH:MM:00 and HH:MM. Format changed to all HH:MM.
* 24:00:00 value 24:00:00 changed to 23:59
* blank values are displayed as "nd" the default missing data identifier in the BCO-DMO data system.
* target_depth value for station 12 cast MP12 changed from 20 to 21.
* Alternate target_depth values supplied for station 8 cast MP06 by submitter.
* column "depth" removed and target_depth name changed to "depth." There is now only one "depth" column.
2024-10-21:
* Same data table described above (Data version 3:2018-12-17) was imported into BCO-DMO's new data system and will be reviewed by data submitter before public release as 708495_v3_falkor-160115-mclane-log.csv
Specified by BCO-DMO Data Managers
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
McLane
McLane
PI Supplied Instrument Name: McLane PI Supplied Instrument Description:Used for water sampling Instrument Name: McLane Pump Instrument Short Name:McLane Pump Instrument Description: McLane pumps sample large volumes of seawater at depth. They are attached to a wire and lowered to different depths in the ocean. As the water is pumped through the filter, particles suspended in the ocean are collected on the filters. The pumps are then retrieved and the contents of the filters are analyzed in a lab.
Surface pump
Surface pump
PI Supplied Instrument Name: Surface pump PI Supplied Instrument Description:Used for water sampling Instrument Name: Pump surface Instrument Short Name:Pump surface Instrument Description: A source of uncontaminated near-surface seawater pumped onto the deck of the research vessel that can be sampled and analyzed. This pumped seawater supply is from an over-the-side pumping system, and is therefore different from the vessel underway seawater system. Community Standard Description: http://vocab.nerc.ac.uk/collection/L05/current/31/
Cruise: FK160115
FK160115
R/V Falkor
Community Standard Description
International Council for the Exploration of the Sea
R/V Falkor
vessel
FK160115
Mak A. Saito
Woods Hole Oceanographic Institution
https://service.rvdata.us/data/cruise/FK160115/doc/FK160115_OfficialCruiseReport_Saito_v3.pdf
Report describing FK160115
R/V Falkor
Community Standard Description
International Council for the Exploration of the Sea
R/V Falkor
vessel