http://lod.bco-dmo.org/id/dataset/720763
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2017-12-12
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
Porites asteroides and Diploria labyrinthiformis calcification from coral colony buoyant weights measured at Hog and Crescent Reef, Bermuda between 2010 and 2012 (BEACON project)
2018-03-02
publication
2018-03-02
revision
BCO-DMO Linked Data URI
2018-03-02
creation
http://lod.bco-dmo.org/id/dataset/720763
Andreas Andersson
University of California-San Diego Scripps
principalInvestigator
Nicholas R. Bates
Bermuda Institute of Ocean Sciences
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Andersson, A., Bates, N. R. (2018) Porites asteroides and Diploria labyrinthiformis calcification from coral colony buoyant weights measured at Hog and Crescent Reef, Bermuda between 2010 and 2012 (BEACON project). Biological and Chemical Oceanography Data Management Office (BCO-DMO). Version Date 2018-03-02 [if applicable, indicate subset used]. http://lod.bco-dmo.org/id/dataset/720763 [access date]
Dataset Description: <p>This dataset contains coral (<em>Diploria&nbsp;</em><em>labyrinthiformis</em>&nbsp;and <em>Porites&nbsp;</em><em>asteroides</em>)&nbsp;buoyant&nbsp;weights from coral colonies at Hog and Crescent Reef, Bermuda between 2010 and 2012.</p>
<p>Sampling locations: Bermuda Platform: Hog Reef (32.45733, -64.83476) and Crescent Reef (32.40078, -64.79747).</p>
<p>These data were utilized in the following publication:</p>
<p><span style="color:rgb(34, 34, 34); font-family:arial,sans-serif">Courtney, T. A., Lebrato, M., Bates, N. R., Collins, A., de Putron, S. J., Garley, R., ... &amp; Andersson, A. J. (2017). Environmental controls on modern scleractinian coral and reef-scale calcification.&nbsp;</span><em>Science advances</em><span style="color:rgb(34, 34, 34); font-family:arial,sans-serif">,&nbsp;</span><em>3</em><span style="color:rgb(34, 34, 34); font-family:arial,sans-serif">(11), e1701356.&nbsp;</span><span style="font-size:13.3333px">doi:&nbsp;<a href="http://doi.org/10.1126/sciadv.1701356" style="color: rgb(17, 85, 204);" target="_blank">10.1126/sciadv.1701356</a></span></p> Methods and Sampling: <p>48 corals of each species (<em>Diploria </em><em>labyrinthiformis</em> and <em>Porites </em><em>asteroides</em>) were collected from Hog Reef and Crescent Reef respectively and cemented onto acrylic tiles using Z-spar A-788 epoxy for a total of 96 coral colonies. 12 colonies of each species were deployed at two separate reef sites on Hog Reef and Crescent Reef for a total of 24 colonies of each species at each reef location. Initial weight (Initial Wt)&nbsp;indicates the weight of coral colony and initial weight 1 (In. Wt 1)&nbsp;represents the coral colony weight plus acrylic tile and cement. Each subsequent weight X represents weighing of coral+epoxy+tile on the day of collection listed in the date column. Temperature and salinity were measured at the time of buoyant weighing in the lab so that seawater density could be calculated to calculate the weight of water displaced by the coral colony. Corals were buoyantly weighed following standard protocols on an OHAUS AV 412 balance twice (wt_1 and wt_2). If weights were significantly different, a third weight (wt_3) was measured.</p>
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-0928406 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=0928406
completed
Andreas Andersson
University of California-San Diego Scripps
858-822-2486
Scripps Institution of Oceanography 9500 Gilman Dr. #0244
La Jolla
CA
92093-0244
USA
aandersson@ucsd.edu
pointOfContact
Nicholas R. Bates
Bermuda Institute of Ocean Sciences
1-441-297-1880
17 Biological Lane GE 01
St. Georges
Bermuda
nick.bates@bios.edu
pointOfContact
asNeeded
Unknown
Date
Wt_label
Site
Lat
Lon
Site_ID
Species
Coral_ID
Tag_ID
Salinity
Temp
wt_1
wt_2
wt_3
OHAUS AV 412 (Coral weights)
YSI 556 Handheld Multiparameter Instrument
theme
None, User defined
date
sample description
site
latitude
longitude
species scientific name (binomial)
sample identification
salinity
water temperature at measurement depth
calcification
featureType
BCO-DMO Standard Parameters
scale or balance
Water Quality Multiprobe
instrument
BCO-DMO Standard Instruments
BIOS_BEACON
service
Deployment Activity
Bermuda
place
Locations
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
Ocean Carbon and Biogeochemistry
http://us-ocb.org/
Ocean Carbon and Biogeochemistry
The Ocean Carbon and Biogeochemistry (OCB) program focuses on the ocean's role as a component of the global Earth system, bringing together research in geochemistry, ocean physics, and ecology that inform on and advance our understanding of ocean biogeochemistry. The overall program goals are to promote, plan, and coordinate collaborative, multidisciplinary research opportunities within the U.S. research community and with international partners. Important OCB-related activities currently include: the Ocean Carbon and Climate Change (OCCC) and the North American Carbon Program (NACP); U.S. contributions to IMBER, SOLAS, CARBOOCEAN; and numerous U.S. single-investigator and medium-size research projects funded by U.S. federal agencies including NASA, NOAA, and NSF.
The scientific mission of OCB is to study the evolving role of the ocean in the global carbon cycle, in the face of environmental variability and change through studies of marine biogeochemical cycles and associated ecosystems.
The overarching OCB science themes include improved understanding and prediction of: 1) oceanic uptake and release of atmospheric CO2 and other greenhouse gases and 2) environmental sensitivities of biogeochemical cycles, marine ecosystems, and interactions between the two.
The OCB Research Priorities (updated January 2012) include: ocean acidification; terrestrial/coastal carbon fluxes and exchanges; climate sensitivities of and change in ecosystem structure and associated impacts on biogeochemical cycles; mesopelagic ecological and biogeochemical interactions; benthic-pelagic feedbacks on biogeochemical cycles; ocean carbon uptake and storage; and expanding low-oxygen conditions in the coastal and open oceans.
OCB
largerWorkCitation
program
BErmuda ocean Acidification and COral reef iNvestigation
https://scripps.ucsd.edu/research/projects/bermuda-ocean-acidification-and-coral-reef-investigation-beacon
BErmuda ocean Acidification and COral reef iNvestigation
<p>NSF abstract:</p>
<p>Ocean acidification owing to anthropogenic emission of CO2 is a significant and imminent threat to marine calcifying organisms and ecosystems such as corals and coral reefs. As a result of future ocean acidification, i.e., increasing seawater CO2, and decreasing pH, carbonate ion concentration [CO3], and carbonate saturation state, it is likely that marine calcifiers will have difficulty growing their shells and skeletons of calcium carbonate (CaCO3) at their present rates. Dissolution of carbonate sediments and structures are also likely to increase, and could ultimately exceed calcification and CaCO3 production, leading to a transition from net accumulation to a net loss in carbonate material of individual coral colonies, coral communities and coral reef ecosystems. Because of Bermuda's relatively high-latitude location (32° N), the annual average surface seawater [CO3] is lower in Bermuda than regions closer to the tropics. As a consequence, the Bermuda coral reef is likely to experience critical [CO3] values and net dissolution before its tropical counterparts as a result of continued ocean acidification. Furthermore, a natural gradient in [CO3] exists along the Bermuda reef with environmental parameters such as, light, temperature, and nutrients being near identical. This gradient allows for unique cross-comparisons of calcification of individual calcifiers and calcifying communities under different [CO3] in a natural environment. </p>
<p>In this study, researchers at the Bermuda Institute of Ocean Science (BIOS) will launch the BEACON project to further our understanding of the consequences of ocean acidification to the process of calcification and CaCO3 production at three different spatial scales including (1) individual coral colonies, (2) local reef communities, and (3) regional coral reef ecosystems. They will conduct (1) in situ and in vitro experiments to assess growth and evaluate net calcification of individual coral colonies of three different species common to Bermuda and the Caribbean exposed to different [CO3] under both natural and controlled experimental conditions; (2) diel and quasi-lagrangian calcification experiments to evaluate net calcification of local reef communities and in moving water masses along the natural [CO3] gradient existent on the Bermuda platform; and (3) time series data collected across the Bermuda platform and offshore, to evaluate net calcification and CaCO3 production of the Bermuda coral reef ecosystem and platform over seasonal and annual cycles. </p>
<p>Broader impacts: This project will provide fundamental data on the consequences of ocean acidification to coral reefs on different temporal and spatial scales. Combined, knowledge at each of the scales will contribute to an improved understanding of this problem in a broader context, i.e., the effect on coral reefs as a global entity and role in the global carbon cycle during past, present and future seawater chemical conditions. As the meaning implies, the research team envisions BEACON to serve as a guiding light to assist researchers and policymakers in framing future strategies and making decisions regarding the management of coral reefs and CO2 emission policies in order to establish CO2 stabilization targets. Scientific understanding and research products from the project will be specifically used in the BIOS explorer program, CoE POGO ocean acidification module, and the coral reef ecology class taught at BIOS. It will also contribute to developing the research and technical skills of one graduate student and one research technician at BIOS, and will include the involvement of interns and NSF REU fellowship students each year of the project.</p>
<p>Based on the findings of the BEACON project, and especially the results published in Andersson et al. (Nature Climate Change, 4, 56-61, 2014) and Yeakel et al. (PNAS, 112, 14512-14517, 2015), BEACON II (<a href="https://www.bco-dmo.org/project/737955">https://www.bco-dmo.org/project/737955</a>) aims to assess the links between offshore and reef biogeochemistry by continuing and expanding on the physical and chemical measurements on the Bermuda coral reef and in the surrounding Sargasso Sea.</p>
BEACON
largerWorkCitation
project
eng; USA
oceans
Bermuda
-64.834759
-64.797469
32.400777
32.457333
2010-08-18
2012-09-18
Bermuda
0
BCO-DMO catalogue of parameters from Porites asteroides and Diploria labyrinthiformis calcification from coral colony buoyant weights measured at Hog and Crescent Reef, Bermuda between 2010 and 2012 (BEACON project)
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/729049.rdf
Name: Date
Units: unitless
Description: <p>Local date of coral weights in format dd/MM/YYYY (AST and ADT)</p>
http://lod.bco-dmo.org/id/dataset-parameter/729050.rdf
Name: Wt_label
Units: unitless
Description: <p>Identifier for weight period</p>
http://lod.bco-dmo.org/id/dataset-parameter/729051.rdf
Name: Site
Units: unitless
Description: <p>Site name of coral in situ growth (Hog = Hog Reef, Bermuda or Cres = Crescent Reef, Bermuda)</p>
http://lod.bco-dmo.org/id/dataset-parameter/729052.rdf
Name: Lat
Units: decimal degrees
Description: <p>Latitude of site</p>
http://lod.bco-dmo.org/id/dataset-parameter/729053.rdf
Name: Lon
Units: decimal degrees
Description: <p>Longitude of site</p>
http://lod.bco-dmo.org/id/dataset-parameter/729054.rdf
Name: Site_ID
Units: unitless
Description: <p>Site identifier of coral in situ growth</p>
http://lod.bco-dmo.org/id/dataset-parameter/729055.rdf
Name: Species
Units: unitless
Description: <p>Coral species (Porites=<em>Porites </em><em>asteroides</em>,Diploria=<em>Diploria</em><em> </em><em>labyrinthiformis</em>)</p>
http://lod.bco-dmo.org/id/dataset-parameter/729056.rdf
Name: Coral_ID
Units: unitless
Description: <p>Identifier for each coral</p>
http://lod.bco-dmo.org/id/dataset-parameter/729057.rdf
Name: Tag_ID
Units: unitless
Description: <p>ID tag for each coral</p>
http://lod.bco-dmo.org/id/dataset-parameter/729058.rdf
Name: Salinity
Units: parts per thousand (ppt)
Description: <p>Salinity of seawater used for buoyant weight</p>
http://lod.bco-dmo.org/id/dataset-parameter/729059.rdf
Name: Temp
Units: degrees Celsius
Description: <p>Temperature of seawater used for buoyant weight</p>
http://lod.bco-dmo.org/id/dataset-parameter/729060.rdf
Name: wt_1
Units: grams (g)
Description: <p>Buoyant weight of coral 1</p>
http://lod.bco-dmo.org/id/dataset-parameter/729061.rdf
Name: wt_2
Units: grams (g)
Description: <p>Buoyant weight of coral 2</p>
http://lod.bco-dmo.org/id/dataset-parameter/729062.rdf
Name: wt_3
Units: grams (g)
Description: <p>Buoyant weight of coral 2</p>
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
97997
https://datadocs.bco-dmo.org/file/0AAMNY4Fg2vQOv/PoritesDiploria.csv
PoritesDiploria.csv
Primary data file for dataset ID 720763
download
https://osprey.bco-dmo.org/dataset/720763/data/download
download
onLine
dataset
<p>48 corals of each species (<em>Diploria </em><em>labyrinthiformis</em> and <em>Porites </em><em>asteroides</em>) were collected from Hog Reef and Crescent Reef respectively and cemented onto acrylic tiles using Z-spar A-788 epoxy for a total of 96 coral colonies. 12 colonies of each species were deployed at two separate reef sites on Hog Reef and Crescent Reef for a total of 24 colonies of each species at each reef location. Initial weight (Initial Wt)&nbsp;indicates the weight of coral colony and initial weight 1 (In. Wt 1)&nbsp;represents the coral colony weight plus acrylic tile and cement. Each subsequent weight X represents weighing of coral+epoxy+tile on the day of collection listed in the date column. Temperature and salinity were measured at the time of buoyant weighing in the lab so that seawater density could be calculated to calculate the weight of water displaced by the coral colony. Corals were buoyantly weighed following standard protocols on an OHAUS AV 412 balance twice (wt_1 and wt_2). If weights were significantly different, a third weight (wt_3) was measured.</p>
Specified by the Principal Investigator(s)
<p>All data are the raw un-processed values at the time of measurement.</p>
<p>BCO-DMO Data Manager Processing Notes:<br />
* added a conventional header with dataset name, PI name, version date<br />
* modified parameter names to conform with BCO-DMO naming conventions<br />
* NaN values changed to nd for "no data"<br />
* Added Site (Cres|Hog),Lat,Lon to be consistent with other datasets.&nbsp; Existing "Site" changed to Site ID (e.g. "Cres 2")</p>
Specified by the Principal Investigator(s)
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
OHAUS AV 412 (Coral weights)
OHAUS AV 412 (Coral weights)
PI Supplied Instrument Name: OHAUS AV 412 (Coral weights) Instrument Name: scale or balance Instrument Short Name: Instrument Description: Devices that determine the mass or weight of a sample. Community Standard Description: http://vocab.nerc.ac.uk/collection/L05/current/LAB13/
YSI 556 Handheld Multiparameter Instrument
YSI 556 Handheld Multiparameter Instrument
PI Supplied Instrument Name: YSI 556 Handheld Multiparameter Instrument PI Supplied Instrument Description:A YSI 556 Handheld Multiparameter Instrument was used to measure in situ temperature (accuracy ± 0.15°C), and salinity (accuracy ± 1%). Instrument Name: Water Quality Multiprobe Instrument Short Name:Water Quality Multiprobe Instrument Description: An instrument which measures multiple water quality parameters based on the sensor configuration.
Cruise: BIOS_BEACON
BIOS_BEACON
BIOS_Small_Boat
vessel
BIOS_BEACON
Andreas Andersson
University of California-San Diego Scripps
BIOS_Small_Boat
vessel