http://lod.bco-dmo.org/id/dataset/722024
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2017-12-28
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
Average measured temperature, salinity, TA, DIC, and pH; Average calculated pCO2, pH, carbonate ion concentration, bicarbonate ion concentration, dissolved CO2, and aragonite saturation state.
2017-12-28
publication
2017-12-28
revision
BCO-DMO Linked Data URI
2017-12-28
creation
http://lod.bco-dmo.org/id/dataset/722024
Justin B. Ries
Northeastern University
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Ries, J. B. (2017) Average measured temperature, salinity, TA, DIC, and pH; Average calculated pCO2, pH, carbonate ion concentration, bicarbonate ion concentration, dissolved CO2, and aragonite saturation state. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2017-12-28 [if applicable, indicate subset used]. http://lod.bco-dmo.org/id/dataset/722024 [access date]
Dataset Description: <p>Seawater chemistry for experiments investigating impact of ocean acidification on coral (<em>Siderastrea siderea</em>)&nbsp;calcification and morphometry.</p>
<p>See also related datasets for <em>Siderastrea siderea&nbsp;</em>calcification rates and corallite morphometry:<br />
<a href="https://www.bco-dmo.org/dataset/722025" target="_blank">Calcification rates</a><br />
<a href="https://www.bco-dmo.org/dataset/722026" target="_blank">Corallite morphometry</a></p>
<p>Data are published in:</p>
<p>Horvath, K.M., Ries, J.B., Castillo, K.D., Westfield, I.T., Armstrong, P., Courtney, T., 2016, Next-century ocean acidification and warming both reduce calcification rate, but only acidification alters skeletal morphology of reef-building coral <em>Siderastrea siderea</em>. Scientific Reports 6: 29613. doi: <a href="https://www.nature.com/articles/srep29613" target="_blank">10.1038/srep29613</a></p>
<p>Please see manuscript for complete methodology.&nbsp;</p>
<p>&nbsp;</p> Methods and Sampling:
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1357665 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1357665
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1437371 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1437371
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1459706 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1459706
onGoing
Justin B. Ries
Northeastern University
781-581-7370
Northeastern University Marine Science Center 430 Nahant Rd.
Nahant
MA
01908
USA
j.ries@northeastern.edu
pointOfContact
asNeeded
Dataset Version: 1
Unknown
Experiment
Temp_m
Temp_m_SE
Temp_m_range_min
Temp_m_range_max
Temp_m_n
Sal_m
Sal_m_SE
Sal_m_range_min
Sal_m_range_max
Sal_m_n
pH_m
pH_m_SE
pH_m_range_min
pH_m_range_max
pH_m_n
TA_m
TA_m_SE
TA_m_range_min
TA_m_range_max
TA_m_n
DIC_m
DIC_m_SE
DIC_m_range_min
DIC_m_range_max
DIC_m_n
pCO2_c
pCO2_c_SE
pCO2_c_range_min
pCO2_c_range_max
pCO2_c_n
pH_c
pH_c_SE
pH_c_range_min
pH_c_range_max
pH_c_n
CO3_c
CO3_c_SE
CO3_c_range_min
CO3_c_range_max
CO3_c_n
HCO3_c
HCO3_c_SE
HCO3_c_range_min
HCO3_c_range_max
HCO3_c_n
CO2sw_c
CO2sw_c_SE
CO2sw_c_range_min
CO2sw_c_range_max
CO2sw_c_n
Arag_sat_c
Arag_sat_c_SE
Arag_sat_c_range_min
Arag_sat_c_range_max
Arag_sat_c_n
MARIANDA corporation VINDTA 3C
theme
None, User defined
sample identification
water temperature at measurement depth
standard error
range
No BCO-DMO term
salinity
pH
total alkalinity (TA)
dissolved inorganic Carbon
Partial pressure of CO2
Carbonate concentration [CO3]2-
bicarbonate concentration [HCO3]-
Aragonite Saturation State
featureType
BCO-DMO Standard Parameters
MARIANDA VINDTA 3C total inorganic carbon and titration alkalinity analyser
instrument
BCO-DMO Standard Instruments
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
A combined boron isotope, pH microelectrode and pH-sensitive dye approach to constraining acid/base chemistry in the calcifying fluids of corals
http://nuweb2.neu.edu/rieslab/
A combined boron isotope, pH microelectrode and pH-sensitive dye approach to constraining acid/base chemistry in the calcifying fluids of corals
<p><em>Description from NSF award abstract:</em><br />
The anthropogenic elevation of atmospheric CO2 is causing the oceans to become more acidic, which may make it more challenging for corals to build their skeletons and, ultimately, entire reef structures. How corals respond to future ocean acidification will largely depend on how the pH of the internal fluid from which they produce their skeletons-their so-called calcifying fluid-is impacted by the surrounding seawater. It is therefore essential that current methods are refined to accurately measure the pH of corals' calcifying fluids in order to understand and, ideally, predict their responses to CO2-induced ocean acidification. In this project, a three-pronged approach to measure calcifying fluid pH within three species of reef-forming corals will be used to assess how their calcifying fluid pH responds to experimentally induced ocean acidification. This research will improve our understanding of corals' responses to ocean acidification and thus has the potential to inform the decisions of policy makers and legislators seeking to mitigate the deleterious effects of rising atmospheric CO2 on marine ecosystems. The work will support the development of three early career scientists, a postdoctoral fellow, graduate students, and undergraduate researcher assistants-several of whom are from underrepresented groups in the earth and ocean sciences. Results will be widely disseminated through publications, conference presentations, the PIs' websites, an educational film, coursework, and outreach activities at area schools, museums, and science centers.</p>
<p>Corals and other types of marine calcifiers are thought to begin the mineralization of their calcium carbonate skeletons by actively elevating pH of their calcifying fluid, thereby converting bicarbonate ions (comprising ~90% of seawater dissolved inorganic carbon) to carbonate ions, the form of carbon used in calcification. This project will compare the combined boron isotope, pH microelectrode, and pH-sensitive dye approach to measure the calcifying fluid pH of three species of scleractinian corals, and to assess how their calcifying fluid pH (a primary factor controlling their calcification) responds to experimentally induced ocean acidification. As a result this multi-pronged approach to measuring calcifying fluid pH of the same coral species under equivalent culturing conditions will permit the first systematic cross-examination of the validity of these independent approaches. The combined approach will also yield values of calcifying fluid pH with uncertainties that can be quantified via inter-comparison and statistical treatment of these independent measurements. Importantly, this multi-pronged approach will be used on three coral species that due to differences in the carbonate chemistry of their native waters possess differing capacities for proton regulation at their site of calcification; a deep, cold-water coral (strong proton-pumper); a shallow, temperate coral (moderate proton-pumper); and a shallow, tropical coral (weak proton-pumper). Target outcomes of this research include (1) cross-examination of the validity of three independent approaches to estimating coral calcifying fluid pH, (2) quantification of uncertainty associated with the three approaches to estimating coral calcifying fluid pH, (3) advancement of our mechanistic understanding of coral calcification, (4) exploration of the mechanism by which ocean acidification impacts coral calcification, (5) elucidation why corals exhibit such varied responses to ocean acidification, (6) identification of coral types most vulnerable to ocean acidification, (7) exploration of so-called "vital effects" that limit the use of corals in paleoceanographic reconstructions, and (8) quantitative constraint of existing models of coral biomineralization.</p>
CoralCalcifyFluid_pH
largerWorkCitation
project
eng; USA
oceans
2017-12-28
Marine Science Center, Northeastern University
0
BCO-DMO catalogue of parameters from Average measured temperature, salinity, TA, DIC, and pH; Average calculated pCO2, pH, carbonate ion concentration, bicarbonate ion concentration, dissolved CO2, and aragonite saturation state.
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/725759.rdf
Name: Experiment
Units: A,B,C,D
Description: <p>Each experiment was conducted under different temperature and pCO2 conditions. A= 31.9 degrees C and pCO2= 424 ppm-v; B= 28.1 degrees C and 246 ppm-v, C= 31.8 degrees C and 940 ppm-v; D= 28.0 degrees C and 888 ppm-v.</p>
http://lod.bco-dmo.org/id/dataset-parameter/725760.rdf
Name: Temp_m
Units: degrees Celsius
Description: <p>Average measured temperature of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725761.rdf
Name: Temp_m_SE
Units: degrees Celsius
Description: <p>Standard error for average measured temperature of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725762.rdf
Name: Temp_m_range_min
Units: degrees Celsius
Description: <p>Range minimum for average measured temperature of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725763.rdf
Name: Temp_m_range_max
Units: degrees Celsius
Description: <p>Range maximum for average measured temperature of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725764.rdf
Name: Temp_m_n
Units: number
Description: <p>Number of measurements for average measured temperature of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725765.rdf
Name: Sal_m
Units: psu
Description: <p>Average measured salinity of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725766.rdf
Name: Sal_m_SE
Units: psu
Description: <p>Standard error for average measured salinity of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725767.rdf
Name: Sal_m_range_min
Units: psu
Description: <p>Range minimum for average measured salinity of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725768.rdf
Name: Sal_m_range_max
Units: psu
Description: <p>Range maximum for average measured salinity of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725769.rdf
Name: Sal_m_n
Units: number
Description: <p>Number of measurements for average measured salinity of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725770.rdf
Name: pH_m
Units: pH scale
Description: <p>Average measured pH of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725771.rdf
Name: pH_m_SE
Units: pH scale
Description: <p>Standard error for average measured pH of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725772.rdf
Name: pH_m_range_min
Units: pH scale
Description: <p>Range minimum for average measured pH of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725773.rdf
Name: pH_m_range_max
Units: pH scale
Description: <p>Range maximum for average measured pH of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725774.rdf
Name: pH_m_n
Units: number
Description: <p>Number of measurements for average measured pH of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725775.rdf
Name: TA_m
Units: uM
Description: <p>Average measured total alkalinity (TA) of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725776.rdf
Name: TA_m_SE
Units: uM
Description: <p>Standard error for average measured total alkalinity (TA) of the experimental seawater experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725777.rdf
Name: TA_m_range_min
Units: uM
Description: <p>Range minimum for average measured total alkalinity (TA) of the experimental seawater experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725778.rdf
Name: TA_m_range_max
Units: uM
Description: <p>Range maximum for average measured total alkalinity (TA) of the experimental seawater experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725779.rdf
Name: TA_m_n
Units: number
Description: <p>Number of measurements for average measured total alkalinity (TA) of the experimental seawater experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725780.rdf
Name: DIC_m
Units: uM
Description: <p>Average measured dissolved inorganic carbon (DIC) of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725781.rdf
Name: DIC_m_SE
Units: uM
Description: <p>Standard error for average measured dissolved inorganic carbon (DIC) of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725782.rdf
Name: DIC_m_range_min
Units: uM
Description: <p>Range minimum for average measured dissolved inorganic carbon (DIC) of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725783.rdf
Name: DIC_m_range_max
Units: uM
Description: <p>Range maximum for average measured dissolved inorganic carbon (DIC) of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725784.rdf
Name: DIC_m_n
Units: number
Description: <p>Number of measurements for average measured dissolved inorganic carbon (DIC) of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725785.rdf
Name: pCO2_c
Units: ppm-v
Description: <p>Average calculated pCO2 of the mixed gases in equilibrium with the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725786.rdf
Name: pCO2_c_SE
Units: ppm-v
Description: <p>Standard error for average calculated pCO2 of the mixed gases in equilibrium with the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725787.rdf
Name: pCO2_c_range_min
Units: number
Description: <p>Range minimum for average calculated pCO2 of the mixed gases in equilibrium with the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725788.rdf
Name: pCO2_c_range_max
Units: number
Description: <p>Range maximum for average calculated pCO2 of the mixed gases in equilibrium with the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725789.rdf
Name: pCO2_c_n
Units: number
Description: <p>Number of measurements for average calculated pCO2 of the mixed gases in equilibrium with the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725790.rdf
Name: pH_c
Units: pH scale
Description: <p>Average calculated pH of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725791.rdf
Name: pH_c_SE
Units: pH scale
Description: <p>Standard error for average calculated pH of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725792.rdf
Name: pH_c_range_min
Units: pH scale
Description: <p>Range minimum for average calculated pH of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725793.rdf
Name: pH_c_range_max
Units: pH scale
Description: <p>Range maximum for average calculated pH of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725794.rdf
Name: pH_c_n
Units: pH scale
Description: <p>Number of measurements for average calculated pH of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725795.rdf
Name: CO3_c
Units: uM
Description: <p>Average calculated carbonate ion concentration of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725796.rdf
Name: CO3_c_SE
Units: uM
Description: <p>Standard error for average calculated carbonate ion concentration of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725797.rdf
Name: CO3_c_range_min
Units: uM
Description: <p>Range minimum for average calculated carbonate ion concentration of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725798.rdf
Name: CO3_c_range_max
Units: uM
Description: <p>Range maximum for average calculated carnonate ion concentration of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725799.rdf
Name: CO3_c_n
Units: number
Description: <p>Number of measurements for average calculated carbonate ion concentration of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725800.rdf
Name: HCO3_c
Units: uM
Description: <p>Average calculated bicarbonate ion concentration of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725801.rdf
Name: HCO3_c_SE
Units: uM
Description: <p>Standard error for average calculated bicarbonate ion concentration of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725802.rdf
Name: HCO3_c_range_min
Units: uM
Description: <p>Range minimum for average calculated bicarbonate ion concentration of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725803.rdf
Name: HCO3_c_range_max
Units: uM
Description: <p>Range maximum for average calculated bicarbonate ion concentration of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725804.rdf
Name: HCO3_c_n
Units: uM
Description: <p>Number of measurements for average calculated bicarbonate ion concentration of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725805.rdf
Name: CO2sw_c
Units: uM
Description: <p>Average calculated dissolved CO2 of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725806.rdf
Name: CO2sw_c_SE
Units: uM
Description: <p>Standard error for average dissolved CO2 of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725807.rdf
Name: CO2sw_c_range_min
Units: uM
Description: <p>Range minimum for average dissolved CO2 of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725808.rdf
Name: CO2sw_c_range_max
Units: uM
Description: <p>Range maximum for average dissolved CO2 of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725809.rdf
Name: CO2sw_c_n
Units: number
Description: <p>Number of measurements for average dissolved CO2 in exerimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725810.rdf
Name: Arag_sat_c
Units: omega
Description: <p>Average calculated aragonite saturation state of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725811.rdf
Name: Arag_sat_c_SE
Units: omega
Description: <p>Standard error for average calculated aragonite saturation state of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725812.rdf
Name: Arag_sat_c_range_min
Units: omega
Description: <p>Range minumum for average calculated aragonite saturation state of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725813.rdf
Name: Arag_sat_c_range_max
Units: omaga
Description: <p>Range maximum for average calculated aragonite saturation state of the experimental seawater</p>
http://lod.bco-dmo.org/id/dataset-parameter/725814.rdf
Name: Arag_sat_c_n
Units: number
Description: <p>Number of measurements for average calculated aragonite saturation state of the experimental seawater</p>
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
1577
https://datadocs.bco-dmo.org/file/nGGl0RrT6pXxpB/722024.csv
722024.csv
Primary data file for dataset ID 722024
download
https://osprey.bco-dmo.org/dataset/722024/data/download
download
onLine
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
MARIANDA corporation VINDTA 3C
MARIANDA corporation VINDTA 3C
PI Supplied Instrument Name: MARIANDA corporation VINDTA 3C Instrument Name: MARIANDA VINDTA 3C total inorganic carbon and titration alkalinity analyser Instrument Short Name:inorganic carbon and alkalinity analyser Instrument Description: The Versatile INstrument for the Determination of Total inorganic carbon and titration Alkalinity (VINDTA) 3C is a laboratory alkalinity titration system combined with an extraction unit for coulometric titration, which simultaneously determines the alkalinity and dissolved inorganic carbon content of a sample. The sample transport is performed with peristaltic pumps and acid is added to the sample using a membrane pump. No pressurizing system is required and only one gas supply (nitrogen or dry and CO2-free air) is necessary. The system uses a Metrohm Titrino 719S, an ORION-Ross pH electrode and a Metrohm reference electrode. The burette, the pipette and the analysis cell have a water jacket around them. Precision is typically +/- 1 umol/kg for TA and/or DIC in open ocean water. Community Standard Description: http://vocab.nerc.ac.uk/collection/L22/current/TOOL0481/