http://lod.bco-dmo.org/id/dataset/729886
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2018-03-08
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
Outputs from four ocean models describing the waters of the Belizean Barrier Reef.
2018-03-08
publication
2018-03-08
revision
BCO-DMO Linked Data URI
2018-03-08
creation
http://lod.bco-dmo.org/id/dataset/729886
Peter Buston
Boston University
principalInvestigator
David Lindo-Atichati
University of Miami Rosenstiel School of Marine and Atmospheric Science
principalInvestigator
Claire B. Paris-Limouzy
University of Miami Rosenstiel School of Marine and Atmospheric Science
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Buston, P., Paris-Limouzy, C. B., Lindo-Atichati, D. (2018) Outputs from four ocean models describing the waters of the Belizean Barrier Reef. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2018-03-08 [if applicable, indicate subset used]. http://lod.bco-dmo.org/id/dataset/729886 [access date]
Outputs from four ocean models describing the waters of the Belizean Barrier Reef. Dataset Description: <p>Outputs from four ocean models.</p>
<p><strong>LOLA and HOLA model dataset parameters:</strong></p>
<table border="1" cellpadding="1" cellspacing="1" style="width:500px">
<tbody>
<tr>
<td><strong>Name</strong></td>
<td><strong>Description</strong></td>
<td><strong>Units</strong></td>
</tr>
<tr>
<td>Longitude</td>
<td>Longitude</td>
<td>degrees east</td>
</tr>
<tr>
<td>Latitude</td>
<td>Latitude</td>
<td>degrees north</td>
</tr>
<tr>
<td>Time</td>
<td>Time</td>
<td>days since 1900-12-31</td>
</tr>
<tr>
<td>zu</td>
<td>Eastward seawater velocity</td>
<td>meters per second</td>
</tr>
<tr>
<td>zv</td>
<td>Northward seawater velocity</td>
<td>meters per second</td>
</tr>
<tr>
<td>zw</td>
<td>Downward seawater velocity</td>
<td>meters per second</td>
</tr>
</tbody>
</table>
<p>&nbsp;</p>
<p><strong>HOHA and HOHAT model dataset parameters:</strong></p>
<table border="1" cellpadding="1" cellspacing="1" style="width:500px">
<tbody>
<tr>
<td><strong>Name</strong></td>
<td><strong>Description</strong></td>
<td><strong>Units</strong></td>
</tr>
<tr>
<td>Longitude</td>
<td>Longitude</td>
<td>degrees east</td>
</tr>
<tr>
<td>Latitude</td>
<td>Latitude</td>
<td>degrees north</td>
</tr>
<tr>
<td>MT</td>
<td>Time</td>
<td>days since 1900-12-31 00:00:00</td>
</tr>
<tr>
<td>u</td>
<td>Eastward seawater velocity</td>
<td>meters per second</td>
</tr>
<tr>
<td>v</td>
<td>Northward seawater velocity</td>
<td>meters per second</td>
</tr>
<tr>
<td>w_velocity</td>
<td>Downward seawater velocity</td>
<td>meters per second</td>
</tr>
<tr>
<td>water_temp</td>
<td>Seawater temperature</td>
<td>degrees Celsius</td>
</tr>
<tr>
<td>salinity</td>
<td>Seawater salinity</td>
<td>PSU</td>
</tr>
<tr>
<td>pot_density</td>
<td>Seawater potential density</td>
<td>sigma</td>
</tr>
<tr>
<td>bathymetry</td>
<td>Bathymetry</td>
<td>meters</td>
</tr>
<tr>
<td>ilt</td>
<td>Ocean mixed layer thickness</td>
<td>meters</td>
</tr>
<tr>
<td>mlt</td>
<td>Ocean mixed layer thickness</td>
<td>meters</td>
</tr>
<tr>
<td>ssh</td>
<td>Sea surface elevation</td>
<td>meters</td>
</tr>
</tbody>
</table>
<p>&nbsp;</p> Methods and Sampling: <p><strong>Methodology:</strong></p>
<p>Methodology is explained in <a href="https://www.sciencedirect.com/science/article/pii/S1463500316300993?via%3Dihub" target="_blank">Lindo-Atichati et al. (2016)</a>. As a brief summary, we constructed a hierarchy of four ocean-atmosphere models operating at multiple scales within a 1 × 1 deg domain of the Belizean Barrier Reef. The four models are: 1) A Low-resolution Ocean model and Low-resolution Atmospheric model (LOLA); (2) A High-resolution Ocean model and Low-resolution Atmospheric model (HOLA); (3) A High-resolution Ocean model and High-resolution Atmospheric model (HOHA); (4) A High-resolution Ocean model and High-resolution Atmospheric model with Tidal forcing (HOHAT). The ocean models are based on the HYbrid Coordinate Ocean Model (HYCOM, Bleck, 2002; Chassignet et al., 2003; Wallcraft et al., 2009). The atmospheric models are based on the non-hydrostatic Weather Research and Forecasting (WRF) and on the Navy Operational Global Atmospheric Prediction System (NOGAPS). The drifter data was from surface drifters provided by the Consortium for Advanced Research on Transport of Hydrocarbon in the Environment (<a href="http://carthe.org/" target="_blank">CARTHE</a>).</p>
<p><strong>Sampling and analytical procedures:</strong></p>
<p>From May 30 to July 2 of 2013, 55 drifter deployments were made at 1–5 km off a 40 km stretch of the BBR centered on South Water Caye (16.82 deg N, 87.97 deg W) (Fig. 2 b and c of <a href="https://www.sciencedirect.com/science/article/pii/S1463500316300993?via%3Dihub" target="_blank">Lindo-Atichati et al (2016)</a>). The hierarchy of four ocean-atmosphere models were used for the larger area from 16.35 to 17.30 deg N, and from 87.48 to 88.47 deg W (Fig. 1 of <a href="https://www.sciencedirect.com/science/article/pii/S1463500316300993?via%3Dihub" target="_blank">Lindo-Atichati et al (2016)</a>).</p>
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1260424 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1260424
completed
Peter Buston
Boston University
617-358-5412
Department of Biology 5 Cummington Mall
Boston
MA
02215
USA
buston@bu.edu
pointOfContact
David Lindo-Atichati
University of Miami Rosenstiel School of Marine and Atmospheric Science
786-286-0126
Department of Earth and Environmental Science 365 5th Avenue
New York
New York
10016
USA
dlindo@gc.cuny.edu
pointOfContact
Claire B. Paris-Limouzy
University of Miami Rosenstiel School of Marine and Atmospheric Science
305-421-4219
University of Miami Rosenstiel School of Marine and Atmospheric Science, Division of Marine Physics 4600 Rickenbacker Causeway
Miami
FL
33149-1098
USA
cparis@rsmas.miami.edu
pointOfContact
asNeeded
Dataset Version: 1
Unknown
Belize_2010
service
Deployment Activity
Carrie Bow Caye, Belizean Barrier Reef (16°48’10’’ N 88°05’45” W)
place
Locations
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
An Integrative Investigation of Population Connectivity Using a Coral Reef Fish
http://people.bu.edu/buston/lab/Welcome.html
An Integrative Investigation of Population Connectivity Using a Coral Reef Fish
<p>Understanding the patterns, causes and consequences of larval dispersal is a major goal of 21st century marine ecology. Patterns of dispersal determine the rates of larval exchange, or connectivity, between populations. Both physical factors (e.g., water movement) and biological factors (e.g., larval behavior) cause variation in population connectivity. Population connectivity, in turn, has major consequences for all aspects of an organism's biology, from individual behavior to metapopulation dynamics, and from evolution within metapopulations to the origin and extinction of species. Further, understanding population connectivity is critical for the design of effective networks of marine reserves, creation of vital tools in conservation, and the development of sustainable fisheries.</p>
<p>Over the last decade, three methods, each of which tells something slightly different, have emerged as leading contenders to provide the greatest insights into population connectivity. First, coupled biophysical models make assumptions regarding water flow, larval behavior and ecology, to predict population connectivity. Second, indirect genetic methods use spatial distributions of allele frequencies to infer population connectivity. Third, direct genetic methods use parentage analyses, tracing recruits to specific adults, to measure population connectivity. Despite advances, lack of integration means that we do not know the predictive skill of biophysical models, or the extent to which patterns of dispersal predict spatial genetic structure. The overall objective of this proposal is to conduct an integrated investigation of population connectivity, using all three methods in one tractable system: the neon goby, Elacatinus lori, on the Belizean Barrier Reef. There are three motives for this choice of study system: i) fourteen highly polymorphic microsatellite loci have been developed, facilitating the assignment of recruits to parents using parentage analyses and the measurement of dispersal; ii) the physical oceanography of the Belizean Barrier Reef is well-studied, facilitating the development and testing of coupled biophysical models; and, iii) E. lori has a relatively small biogeographic range, facilitating analysis of the spatial distribution of allele frequencies throughout its range.</p>
<p>Broader Impacts. The grant will support one postdoc and two graduate students who will be trained in scientific diving, marine fieldwork, population genetics, biophysical modeling, and mathematical modeling, and will gain collaborative research experience. PIs will incorporate research findings in their courses, which cover all these topics. The grant will also broaden participation of under-represented groups by supporting six undergraduates from groups traditionally underrepresented in STEM fields. In each year of the project there will be an All Participants meeting to reinforce the network of participants. A project website will be developed, in English and Spanish, on the theme of larval dispersal and population connectivity. This will include a resource for K-12 marine science educators developed in collaboration with a marine science educator. All PIs will ensure that results are broadly disseminated to the scientific community and general public via appropriate forms of media.</p>
Elacatinus Dispersal I
largerWorkCitation
project
eng; USA
oceans
Carrie Bow Caye, Belizean Barrier Reef (16°48’10’’ N 88°05’45” W)
-88.036985
-88.036985
16.95401
16.95401
2018-03-08
Belizean Barrier Reef System (16.803 degrees North 88.096 degrees West)
0
BCO-DMO catalogue of parameters from Outputs from four ocean models describing the waters of the Belizean Barrier Reef.
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
43677975
https://datadocs.bco-dmo.org/file/93v3qNLIpywj8/LOLA.tar.zip
LOLA.tar.zip
A Low-resolution Ocean model and Low-resolution Atmospheric model (LOLA)
download
3576881720
https://datadocs.bco-dmo.org/file/k6W6GLwiqkLZBo/HOLA.tar.zip
HOLA.tar.zip
A High-resolution Ocean model and Low-resolution Atmospheric model (HOLA)
download
12255496578
https://datadocs.bco-dmo.org/file/M7n7RA7Cq5q0R9/HOHAT.tar.zip
HOHAT.tar.zip
A High-resolution Ocean model and High-resolution Atmospheric model with Tidal forcing (HOHAT)
download
12777318213
https://datadocs.bco-dmo.org/file/EKLKJpKiWWl5JR/HOHA.tar.zip
HOHA.tar.zip
A High-resolution Ocean model and High-resolution Atmospheric model (HOHA)
download
https://osprey.bco-dmo.org/dataset/729886/data/download
download
onLine
dataset
<p><strong>Methodology:</strong></p>
<p>Methodology is explained in <a href="https://www.sciencedirect.com/science/article/pii/S1463500316300993?via%3Dihub" target="_blank">Lindo-Atichati et al. (2016)</a>. As a brief summary, we constructed a hierarchy of four ocean-atmosphere models operating at multiple scales within a 1 × 1 deg domain of the Belizean Barrier Reef. The four models are: 1) A Low-resolution Ocean model and Low-resolution Atmospheric model (LOLA); (2) A High-resolution Ocean model and Low-resolution Atmospheric model (HOLA); (3) A High-resolution Ocean model and High-resolution Atmospheric model (HOHA); (4) A High-resolution Ocean model and High-resolution Atmospheric model with Tidal forcing (HOHAT). The ocean models are based on the HYbrid Coordinate Ocean Model (HYCOM, Bleck, 2002; Chassignet et al., 2003; Wallcraft et al., 2009). The atmospheric models are based on the non-hydrostatic Weather Research and Forecasting (WRF) and on the Navy Operational Global Atmospheric Prediction System (NOGAPS). The drifter data was from surface drifters provided by the Consortium for Advanced Research on Transport of Hydrocarbon in the Environment (<a href="http://carthe.org/" target="_blank">CARTHE</a>).</p>
<p><strong>Sampling and analytical procedures:</strong></p>
<p>From May 30 to July 2 of 2013, 55 drifter deployments were made at 1–5 km off a 40 km stretch of the BBR centered on South Water Caye (16.82 deg N, 87.97 deg W) (Fig. 2 b and c of <a href="https://www.sciencedirect.com/science/article/pii/S1463500316300993?via%3Dihub" target="_blank">Lindo-Atichati et al (2016)</a>). The hierarchy of four ocean-atmosphere models were used for the larger area from 16.35 to 17.30 deg N, and from 87.48 to 88.47 deg W (Fig. 1 of <a href="https://www.sciencedirect.com/science/article/pii/S1463500316300993?via%3Dihub" target="_blank">Lindo-Atichati et al (2016)</a>).</p>
Specified by the Principal Investigator(s)
<p>Data was processed with AWK IEEE Std 1003.1-2008 for data extraction, with Matlab version R2014a for data manipulation and statistical analysis, and with Generic Mapping Tools GMT version&nbsp;4 for mapping.</p>
<p><strong>BCO-DMO Data Processing Notes:</strong></p>
<p>-Added decimal degree lat and lon to data<br />
-Reformatted dates to&nbsp;yyyy/mm/dd<br />
-Reformatted column names to comply with naming standards<br />
-Replaced blank cells with nd</p>
Specified by the Principal Investigator(s)
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
Deployment: Belize_2010
Belize_2010
lab Buston
laboratory
Belize_2010
Peter Buston
Boston University
lab Buston
laboratory