http://lod.bco-dmo.org/id/dataset/730891
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2018-03-13
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
Station locations for the global metaproteomic dataset from R/V Kilo Moana cruise KM1128, the METZYME expedition in the tropical North Pacific in 2011.
2019-04-12
publication
2019-04-12
revision
Marine Biological Laboratory/Woods Hole Oceanographic Institution Library (MBLWHOI DLA)
2019-03-21
publication
https://doi.org/10.1575/1912/bco-dmo.730891.2
Mak A. Saito
Woods Hole Oceanographic Institution
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Saito, M. (2019) Station locations for the global metaproteomic dataset from R/V Kilo Moana cruise KM1128, the METZYME expedition in the tropical North Pacific in 2011. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 3) Version Date 2019-04-12 [if applicable, indicate subset used]. doi:10.1575/1912/bco-dmo.730891.3 [access date]
Station locations for the global metaproteomic dataset from KM1128 the METZYME expedition. Dataset Description: <p>Station locations and sampling depths for the global metaproteomic dataset from KM1128 the METZYME expedition.</p> Methods and Sampling: <p>Station locations for the global metaproteomic dataset from KM1128 the METZYME expedition.</p>
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1260233 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1260233
Funding provided by Gordon and Betty Moore Foundation: Marine Microbiology Initiative (MMI) Award Number: GBMF3782 Award URL: https://www.moore.org/grant-detail?grantId=GBMF3782
completed
Mak A. Saito
Woods Hole Oceanographic Institution
508-289-2393
266 Woods Hole Rd. MS #51 Watson Lab
Woods Hole
MA
02543
USA
msaito@whoi.edu
pointOfContact
asNeeded
Dataset Version: 3
Unknown
station_ID
station_number
depth
lon
lat
cruise
McLane_cast
McLane_date_local
McLane_time_local
ISO_DateTime_UTC
theme
None, User defined
station
depth
longitude
latitude
Cruise identfier
cast
date_local
time_local
ISO_DateTime_UTC
featureType
BCO-DMO Standard Parameters
KM1128
service
Deployment Activity
tropical North Pacific along 150 degrees West from 18 degrees North to the equator
place
Locations
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
U.S. GEOTRACES
http://www.geotraces.org/
U.S. GEOTRACES
GEOTRACES is a SCOR sponsored program; and funding for program infrastructure development is provided by the U.S. National Science Foundation.
GEOTRACES gained momentum following a special symposium, S02: Biogeochemical cycling of trace elements and isotopes in the ocean and applications to constrain contemporary marine processes (GEOSECS II), at a 2003 Goldschmidt meeting convened in Japan. The GEOSECS II acronym referred to the Geochemical Ocean Section Studies To determine full water column distributions of selected trace elements and isotopes, including their concentration, chemical speciation, and physical form, along a sufficient number of sections in each ocean basin to establish the principal relationships between these distributions and with more traditional hydrographic parameters;
* To evaluate the sources, sinks, and internal cycling of these species and thereby characterize more completely the physical, chemical and biological processes regulating their distributions, and the sensitivity of these processes to global change; and
* To understand the processes that control the concentrations of geochemical species used for proxies of the past environment, both in the water column and in the substrates that reflect the water column.
GEOTRACES will be global in scope, consisting of ocean sections complemented by regional process studies. Sections and process studies will combine fieldwork, laboratory experiments and modelling. Beyond realizing the scientific objectives identified above, a natural outcome of this work will be to build a community of marine scientists who understand the processes regulating trace element cycles sufficiently well to exploit this knowledge reliably in future interdisciplinary studies.
Expand "Projects" below for information about and data resulting from individual US GEOTRACES research projects.
U.S. GEOTRACES
largerWorkCitation
program
Connecting Trace Elements and Metalloenzymes Across Marine Biogeochemical Gradients (GPc03)
https://osprey.bco-dmo.org/project/2236
Connecting Trace Elements and Metalloenzymes Across Marine Biogeochemical Gradients (GPc03)
<p>MetZyme project researchers will determine the role of enzymatic activity in the cycling of trace metals. Specifically the research will address the following questions: (1) degradation of sinking particulate organic material in the Tropical North Pacific can be influenced by the ability of microbes to synthesize zinc proteases, which in turn is controlled by the abundance or availability of zinc, and (2) methylation of mercury is controlled, in part, by the activity of cobalt-containing enzymes, and therefore the supply of labile cobalt to the corrinoid-containing enzymes or co-factors responsible for methylation. To attain their goal, they will collect dissolved and particulate samples for trace metals and metalloenzymes from three stations along a biogeochemical gradient in the Tropical North Pacific (along 150 degrees West from 18 degrees North to the equator). Sinking particles from metal clean sediment traps will also be obtained. The samples will also be used to carry out shipboard incubation experiments using amendments of metals, metal-chelators, B12, and proteases to examine the sensitivity and metal limitation of heterotrophic, enzymatic degradation of organic matter within the oceanic "Twilight Zone" (100-500 m). This study will result in a novel metaproteomic/metalloenzyme datasets that should provide insights into the biogeochemical cycling of metals, as well as co-limitation of primary productivity and controls on the export of carbon from the photic zone. In addition to the final data being contributed to BCO-DMO, an online metaproteomic data server will be created so the community has access to the raw data files generated by this research.</p>
MetZyme
largerWorkCitation
project
eng; USA
location
oceans
tropical North Pacific along 150 degrees West from 18 degrees North to the equator
153.2745
175.9503
-15.7878
20.6372
2011-10-01
2011-10-25
Tropical North Pacific along 150 degrees West from 18 degrees North to the equator
0
BCO-DMO catalogue of parameters from Station locations for the global metaproteomic dataset from R/V Kilo Moana cruise KM1128, the METZYME expedition in the tropical North Pacific in 2011.
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/730899.rdf
Name: station_ID
Units: unitless
Description: <p>Station ID; a combination of station number and depth at the station</p>
http://lod.bco-dmo.org/id/dataset-parameter/730900.rdf
Name: station_number
Units: unitless
Description: <p>Station number</p>
http://lod.bco-dmo.org/id/dataset-parameter/730901.rdf
Name: depth
Units: meters
Description: <p>Depth at station</p>
http://lod.bco-dmo.org/id/dataset-parameter/730902.rdf
Name: lon
Units: decimal degrees
Description: <p>Longitude</p>
http://lod.bco-dmo.org/id/dataset-parameter/730903.rdf
Name: lat
Units: decimal degrees
Description: <p>Latitude</p>
http://lod.bco-dmo.org/id/dataset-parameter/731291.rdf
Name: cruise
Units: unitless
Description: <p>Cruise deployment identification</p>
http://lod.bco-dmo.org/id/dataset-parameter/731292.rdf
Name: McLane_cast
Units: unitless
Description: <p>McLane cast ID number</p>
http://lod.bco-dmo.org/id/dataset-parameter/731298.rdf
Name: McLane_date_local
Units: unitless
Description: <p>Date Local (HST, UTC-10) in format yyyy-mm-dd</p>
http://lod.bco-dmo.org/id/dataset-parameter/757057.rdf
Name: McLane_time_local
Units: unitless
Description: <p>Time Local (HST, UTC-10) in format hh:mm</p>
http://lod.bco-dmo.org/id/dataset-parameter/757058.rdf
Name: ISO_DateTime_UTC
Units: unitless
Description: <p>Timestamp (UTC) in standard ISO 8601:2004(E) format YYYY-mm-ddTHH:MMZ</p>
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2762
https://darchive.mblwhoilibrary.org/bitstream/1912/24013/1/dataset-730891_station-locations__v3.tsv
download
2704
https://darchive.mblwhoilibrary.org/bitstream/1912/23898/1/dataset-730891_station-locations__v2.tsv
download
https://doi.org/10.1575/1912/bco-dmo.730891.2
download
onLine
dataset
<p>Station locations for the global metaproteomic dataset from KM1128 the METZYME expedition.</p>
Specified by the Principal Investigator(s)
<p><strong>BCO-DMO Processing Notes:</strong></p>
<p>Data version 1 (2018-03-13):<br />
- Spaces were replaced with underscores in column headers and in data<br />
- The first column in the original file was unnamed and so was renamed as "Station_ID"<br />
- The "Station #" column was renamed to "Station_number"<br />
- Units were removed from column names<br />
- Added McLane_cast, McLane_time_local, and cruise columns to provide additional metadata for each station location and sampling event.<br />
&nbsp;</p>
<div>Data version 2 (2019-02-27) replaced data version 1 (2018-03-13):&nbsp;<br />
- Notes for data version 1 above also apply to data version 2.</div>
<div>- Split McLane_time_local into date local and time local columns.</div>
<div>- Added UTC_offset column and ISO_DateTime_UTC.&nbsp;</div>
<div>- lat/lons&nbsp;corrected to decimal degrees lat and lon between -180 to 180 degrees.&nbsp; Previously the degrees exceeded this.<br />
<br />
Data version 3 (2019-04-12) replaced data version 2 (2019-02-27):<br />
- Updates made to the date/time and cast name columns to fill in missing. Date values updated as well to correct errors.<br />
- Metadata improved to add that local time os HST (UTC-10).&nbsp; See parameter information.<br />
- "T" was missing from ISO 8601 datetime format. Added "T"&nbsp; between date and time.</div>
Specified by the Principal Investigator(s)
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
Cruise: KM1128
KM1128
R/V Kilo Moana
Community Standard Description
International Council for the Exploration of the Sea
R/V Kilo Moana
vessel
KM1128
Carl Lamborg
Woods Hole Oceanographic Institution
R/V Kilo Moana
Community Standard Description
International Council for the Exploration of the Sea
R/V Kilo Moana
vessel