http://lod.bco-dmo.org/id/dataset/753430
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2019-01-23
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
Nearshore pH and temperature at mooring sites in McMurdo Sound, Antarctica from Nov 2013 to Oct 2014
2019-01-28
publication
2019-01-28
revision
Marine Biological Laboratory/Woods Hole Oceanographic Institution Library (MBLWHOI DLA)
2021-01-20
publication
https://doi.org/10.26008/1912/bco-dmo.753430.1
Gretchen E. Hofmann
University of California-Santa Barbara
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Hofmann, G. E. (2021) Nearshore pH and temperature at mooring sites in McMurdo Sound, Antarctica, Overwinter 2011-2012. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2019-01-28 [if applicable, indicate subset used]. doi:10.26008/1912/bco-dmo.753430.1 [access date]
Nearshore pH, temperature, (salinity, depth) at mooring sites in McMurdo Sound, Antarctica Dataset Description: <p>All methods are described in Kapsenberg et al. (2015). Data were collected using an autonomous SeaFET pH sensor containing Honeywell DuraFET electrodes (Martz et al., 2010). Sensor depth was 18 m with ~27 m bottom depth. Sensors sampled on a 4-hour frequency.</p> Methods and Sampling: <p>Conversion from voltage to pH (on a total scale) was performed using a single discrete calibration sample&nbsp; collected via SCUBA using a 5 L GO-FLO sampling bottle. Sample collection was conducted within the first two weeks of sensor deployment, after sensor conditioning to seawater, in-situ. Samples were preserved with saturated mercuric chloride Standard Operating Procedure (SOP) 1 (Dickson et al., 2007) and analyzed for spectrophotometric pH (total scale, at 25 degrees Celsius) and total alkalinity following SOP 6b and 3b (Dickson et al. 2007). Sample salinity was measured using a calibrated YSI 3100 Conductivity Instrument. In-situ pH was calculated using the program CO2Calc [Version 1.0.1, 2010, U.S. Geological Survey] using SeaFET temperature recorded at the time of sample collection.</p>
<p>SeaFET thermistors were not individually calibrated resulting in a maximum estimated temperature offset of ~0.3 degrees Celsius.</p>
<p>All processing was conducted in R (v.3.5.1) using seacarb (v.3.2.8) to generate calibration coefficients for the sensor that were later applied to the datset.&nbsp;</p>
Funding provided by NSF Antarctic Sciences (NSF ANT) Award Number: PLR-1246202 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1246202
completed
Gretchen E. Hofmann
University of California-Santa Barbara
805-893-6175
Department of Ecology, Evolution and Marine Biology, UCSB 4310 Marine Science Institute
Santa Barbara
CA
93106-9620
USA
hofmann@ucsb.edu
pointOfContact
asNeeded
Dataset Version: 1
Unknown
id
time
pH
temp
lat
lon
water_depth
sensor_depth
SeaFET sensors
theme
None, User defined
No BCO-DMO term
date
pH
water temperature at measurement depth
latitude
longitude
depth_bottom
depth
featureType
BCO-DMO Standard Parameters
SeapHOx/SeaFET
instrument
BCO-DMO Standard Instruments
McMurdo_pH_Temp
service
Deployment Activity
Cape Evans Site
place
Locations
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
Linking natural variability and anthropogenic changes in pH and temperature to performance in calcifying Antarctic marine invertebrates
https://osprey.bco-dmo.org/project/553634
Linking natural variability and anthropogenic changes in pH and temperature to performance in calcifying Antarctic marine invertebrates
<p>Abstract: The research supported in this project will examine the effects of environmental change on a key Antarctic marine invertebrate, a pelagic mollusk, the pteropod, Limacina helicina antarctica. There are two main activities in this project: (1) to deploy oceanographic equipment, in this case, autonomously recording pH sensors called SeaFETs and other devices that record temperature and salinity, and (2) to use these environmental data in the laboratory at McMurdo Station to study the response of the marine invertebrates to future changes in water quality that is expected in the next few decades. Notably, changes in oceanic pH (aka ocean acidification) and ocean warming are projected to be particularly threatening to calcifying marine organisms in cold-water, high latitude seas, making tolerance data on these organisms a critical research need in Antarctic marine ecosystems. </p>
<p>These Antarctic shelled-animals are especially vulnerable to dissolution stress from ocean acidification because they currently inhabit seawater that is barely at the saturation level to support biogenic calcification. Indeed, these polar animals are considered to be the 'first responders' to chemical changes in the surface oceans. Thus, this project will lead to information about the adaptive capacity of L. helcina antarctica. From an ecological perspective this is important because this animal is a critical part of the Antarctic food chain in coastal waters and changes in its abundance will impact other species. Finally, the research conducted in this project will serve as a training and educational opportunity for undergraduate and graduate students as well as postdoctoral scholars.</p>
OA pH, Temp, Calc Inverts
largerWorkCitation
project
eng; USA
oceans
Cape Evans Site
166.41467
166.41467
-77.63422
-77.63422
2013-11-12
2014-10-23
McMurdo Sound, Antarctica
0
BCO-DMO catalogue of parameters from Nearshore pH and temperature at mooring sites in McMurdo Sound, Antarctica from Nov 2013 to Oct 2014
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/753461.rdf
Name: id
Units: unitless
Description: <p>identifier</p>
http://lod.bco-dmo.org/id/dataset-parameter/753462.rdf
Name: time
Units: unitless
Description: <p>date and time of collection in yyyy-mm-dd HH:MM:SS format</p>
http://lod.bco-dmo.org/id/dataset-parameter/753463.rdf
Name: pH
Units: total units
Description: <p>pH</p>
http://lod.bco-dmo.org/id/dataset-parameter/753464.rdf
Name: temp
Units: degrees Celsius
Description: <p>water temperature</p>
http://lod.bco-dmo.org/id/dataset-parameter/753465.rdf
Name: lat
Units: decimal degrees
Description: <p>latitude in degrees north</p>
http://lod.bco-dmo.org/id/dataset-parameter/753466.rdf
Name: lon
Units: decimal degrees
Description: <p>longitude in degrees east</p>
http://lod.bco-dmo.org/id/dataset-parameter/753467.rdf
Name: water_depth
Units: meters
Description: <p>bottom depth</p>
http://lod.bco-dmo.org/id/dataset-parameter/753468.rdf
Name: sensor_depth
Units: meters
Description: <p>sensor depth</p>
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
179647
https://darchive.mblwhoilibrary.org/bitstream/1912/26594/1/dataset-753430_oa-ph-temp__v1.tsv
download
https://doi.org/10.26008/1912/bco-dmo.753430.1
download
onLine
dataset
<p>Conversion from voltage to pH (on a total scale) was performed using a single discrete calibration sample&nbsp; collected via SCUBA using a 5 L GO-FLO sampling bottle. Sample collection was conducted within the first two weeks of sensor deployment, after sensor conditioning to seawater, in-situ. Samples were preserved with saturated mercuric chloride Standard Operating Procedure (SOP) 1 (Dickson et al., 2007) and analyzed for spectrophotometric pH (total scale, at 25 degrees Celsius) and total alkalinity following SOP 6b and 3b (Dickson et al. 2007). Sample salinity was measured using a calibrated YSI 3100 Conductivity Instrument. In-situ pH was calculated using the program CO2Calc [Version 1.0.1, 2010, U.S. Geological Survey] using SeaFET temperature recorded at the time of sample collection.</p>
<p>SeaFET thermistors were not individually calibrated resulting in a maximum estimated temperature offset of ~0.3 degrees Celsius.</p>
<p>All processing was conducted in R (v.3.5.1) using seacarb (v.3.2.8) to generate calibration coefficients for the sensor that were later applied to the datset.&nbsp;</p>
Specified by the Principal Investigator(s)
<p>BCO-DMO Processing Notes:</p>
<p>- appended lat, lon, sensor_depth, and water_depth columns to include spatial information with the data.<br />
- removed first column as it was an index for the row number.</p>
Specified by the Principal Investigator(s)
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
SeaFET sensors
SeaFET sensors
PI Supplied Instrument Name: SeaFET sensors PI Supplied Instrument Description:Instruments are SeaFET® sensors using a Honeywell DuraFET® electrode, as well as a Thermo Cl-ISE as an external reference for data quality control. (Martz et al, 2010). Instrument Name: SeapHOx/SeaFET Instrument Short Name:SeapHOx/SeaFET Instrument Description: The SeapHOx and SeaFET are autonomous sensors originally designed and developed by the Todd Martz Lab at Scripps Institution of Oceanography. The SeaFET was designed to measure pH and temperature. The SeapHOx, designed later, combined the SeaFET with additional integrated sensors for dissolved oxygen and conductivity. Refer to Martz et al. 2010 (doi:10.4319/lom.2010.8.172).
The SeapHOx package is now produced by Sea-Bird Scientific and allows for integrated data collection of pH, temperature, salinity, and oxygen. Refer to Sea-Bird for specific model information.
Deployment: McMurdo_pH_Temp
McMurdo_pH_Temp
McMurdo Station
laboratory
McMurdo_pH_Temp
Gretchen E. Hofmann
University of California-Santa Barbara
McMurdo Station
laboratory