<div><p>Polished mineral chips were prepared and deployed as described in Edwards et al. 2012 (DOI: 110.2204/iodp.proc.336.109.2012). Mineral colonization experiments were recovered during cruise AT39-01 in October 2017 and processed as described in Orcutt et al. 2011 (DOI: 10.1038/ismej.2010.157). Mineral chips were preserved in cold 4% paraformaldehyde in 1XPBS buffer, rinsed with 1XPBS, and then stored at -20ºC in a 1:1 mixture of 1XPBS:ethanol. Chips were serially dehydrated in the ethanol baths of increasing concentration for 10 minutes each, immersed in 100% hexodimethylsilane for 10 minutes, and air dried for 48 hours. Dehydrated chips were then mounted on SEM stubs, sputter coated with gold, and imaged on a Zeiss Supra25 field emission scanning microscope (SEM). </p></div>
Scanning Electron Microscopy (SEM) photographs of biofilms and mineral alteration products
<div><p>A collection of SEM imagery in .tiff format are available at the following urls. The size of each package is provided in parenthesis after the url. The file name of each package corresponds to the SampleIdentification field found in the data file through the Get Data button at the top of the page.</p>
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href="https://datadocs.bco-dmo.org/docs/302/North_Pond_2017/data_docs/756152/1/B578.zip">https://datadocs.bco-dmo.org/docs/302/North_Pond_2017/data_docs/756152/1/B578.zip</a> (14M)<br /><a href="https://datadocs.bco-dmo.org/docs/302/North_Pond_2017/data_docs/756152/1/B580.zip">https://datadocs.bco-dmo.org/docs/302/North_Pond_2017/data_docs/756152/1/B580.zip</a> (12M)<br /><a href="https://datadocs.bco-dmo.org/docs/302/North_Pond_2017/data_docs/756152/1/B612.zip">https://datadocs.bco-dmo.org/docs/302/North_Pond_2017/data_docs/756152/1/B612.zip</a> (19M)<br /><a href="https://datadocs.bco-dmo.org/docs/302/North_Pond_2017/data_docs/756152/1/B613.zip">https://datadocs.bco-dmo.org/docs/302/North_Pond_2017/data_docs/756152/1/B613.zip</a> (16M)<br /><a href="https://datadocs.bco-dmo.org/docs/302/North_Pond_2017/data_docs/756152/1/B615.zip">https://datadocs.bco-dmo.org/docs/302/North_Pond_2017/data_docs/756152/1/B615.zip</a> (21M)<br /><a 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<p> </p></div>
AT39-01_FLOCS_SEM
<div><p>BCO-DMO Processing Notes:<br />
- zipped all image subfolders into individual packages based on the Sample Identification text string<br />
- modified parameter names to conform with BCO-DMO naming conventions<br />
- added conventional header with dataset name, PI name, version date</p></div>
756152
AT39-01_FLOCS_SEM
2019-02-19T08:57:19-05:00
2019-02-19T08:57:19-05:00
2023-07-07T16:10:26-04:00
urn:bcodmo:dataset:756152
Scanning Electron Microscopy (SEM) photographs of biofilms and mineral alteration products from R/V Atlantis AT39-01 in the North Pond CORK Sites U1382A, U1383C from 2011-2017
false
Orcutt, B. N., D'Angelo, T. (2019) Scanning Electron Microscopy (SEM) photographs of biofilms and mineral alteration products from R/V Atlantis AT39-01 in the North Pond CORK Sites U1382A, U1383C from 2011-2017. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2019-02-22 [if applicable, indicate subset used]. http://lod.bco-dmo.org/id/dataset/756152 [access date]
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