Near Edge X-ray Fluorescence Spectroscopy Data for standard organic phosphorus compounds

Website: https://www.bco-dmo.org/dataset/762119
Data Type: experimental
Version: 1
Version Date: 2019-03-13

Project
» P-NEXFS investigation of the influence of aerosol phosphorus on the Mediterranean Sea (Aerosol P)
ContributorsAffiliationRole
Ingall, ElleryGeorgia Institute of Technology (GA Tech)Principal Investigator
Rauch, ShannonWoods Hole Oceanographic Institution (WHOI BCO-DMO)BCO-DMO Data Manager

Abstract
Near Edge X-ray Fluorescence Spectroscopy Data for standard organic phosphorus compounds.


Methods & Sampling

Methodology: X-ray spectromicroscopy data were collected using an energy dispersive silicon drift detector (Ketek with a 5mm2 sensitive area). A flow of helium was introduced between the X-ray optical hardware and the sample to reduce X-ray backscatter. An in-line monitor stick composed of hydroxyapatite was measured with each sample in order to identify and correct for any potential drift in monochrometer energy calibration that occurred during analyses (de Jonge et al., 2010). Clean areas of Teflon and cellulose acetate filters were examined as blanks and showed negligible background signal. The data for an individual P-NEXFS spectrum were normalized to create a relative intensity value ofapproximately 1 for post-edge area of the spectra (>2160 eV).

Sampling and analytical procedures: Phosphorus compounds were obtained from chemical supply houses. See papers cited below for details.

Instruments: X-ray fluorescence microscope located at beamline 2-ID-B at the Advanced Photon Source, Argonne National Laboratory. The beamline is optimized to examine samples over a 1–4 keV energy range using a focused X-ray beam with a spot size of approximately 60 nanometers squared . The energy was calibrated using a NIST standard reference material SRM2910 calcium hydroxyapatite. The whiteline energy of the standard was set to 2153 eV.

Data processing: P-NEXFS data were normalized to create a relative intensity value of approximately 1 for post-edge area of the spectra.


Data Processing Description

BCO-DMO Processing: modified parameter names (replaced spaces and hyphens with underscores, removed special characters, replaced ' with "prime"; renamed "2-aminoethylphosphonic acid" to "Two-aminoethylphosphonic acid".


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Data Files

File
Phosphorus_NEXFS_Standards.csv
(Comma Separated Values (.csv), 13.01 KB)
MD5:5bcfc9b18413185646d88b77132441fd
Primary data file for dataset ID 762119

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Related Publications

De Jonge, M. D., Paterson, D., McNulty, I., Rau, C., Brandes, J. A., & Ingall, E. (2010). An energy and intensity monitor for X-ray absorption near-edge structure measurements. Nuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment, 619(1-3), 154–156. doi:10.1016/j.nima.2010.01.001
Methods
Longo, A. F., Ingall, E. D., Diaz, J. M., Oakes, M., King, L. E., Nenes, A., … Vine, D. J. (2014). P-NEXFS analysis of aerosol phosphorus delivered to the Mediterranean Sea. Geophysical Research Letters, 41(11), 4043–4049. doi:10.1002/2014gl060555 https://doi.org/10.1002/2014GL060555
Results

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Parameters

ParameterDescriptionUnits
EnergyX-ray energy nd
Two_aminoethylphosphonic_acidName of organic phosphorus compound. Units (x-ray fluorescence counts) are normalized to incoming radiation. CAS# 2041-14-7 x-ray fluorescence counts
Ammonium_OO_diethyldithiophosphateName of organic phosphorus compound. Units (x-ray fluorescence counts) are normalized to incoming radiation. CAS# 1068-22-0 x-ray fluorescence counts
Ammonium_PolyphosphateName of organic phosphorus compound. Units (x-ray fluorescence counts) are normalized to incoming radiation. CAS# 68333-79-9 x-ray fluorescence counts
Adenosine_5prime_triphosphateName of organic phosphorus compound. Units (x-ray fluorescence counts) are normalized to incoming radiation. CAS# 51963-61-2 x-ray fluorescence counts
Glycerol_PhosphateName of organic phosphorus compound. Units (x-ray fluorescence counts) are normalized to incoming radiation. CAS# 55073-41-1 x-ray fluorescence counts
HexametaphosphateName of organic phosphorus compound. Units (x-ray fluorescence counts) are normalized to incoming radiation. CAS# 68915-31-1 x-ray fluorescence counts
Polyphosphate_CL15Name of organic phosphorus compound. Units (x-ray fluorescence counts) are normalized to incoming radiation. Chain Length 15 x-ray fluorescence counts
Sodium_tripolyphosphateName of organic phosphorus compound. Units (x-ray fluorescence counts) are normalized to incoming radiation. CAS# 7758-29-4 x-ray fluorescence counts
O_Phospho_L_SerineName of organic phosphorus compound. Units (x-ray fluorescence counts) are normalized to incoming radiation. CAS# 407-41-0 x-ray fluorescence counts
O_PhosphorylethanolamineName of organic phosphorus compound. Units (x-ray fluorescence counts) are normalized to incoming radiation. CAS# 1071-23-4 x-ray fluorescence counts
Propylenediphosphonic_AcidName of organic phosphorus compound. Units (x-ray fluorescence counts) are normalized to incoming radiation. CAS# 4671-82-3 x-ray fluorescence counts
PhosphotidylcholineName of organic phosphorus compound. Units (x-ray fluorescence counts) are normalized to incoming radiation. CAS# 97281-47-5 x-ray fluorescence counts
Phytic_AcidName of organic phosphorus compound. Units (x-ray fluorescence counts) are normalized to incoming radiation. CAS# 83-86-3 x-ray fluorescence counts


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Instruments

Dataset-specific Instrument Name
X-ray fluorescence microscope
Generic Instrument Name
Fluorescence Microscope
Dataset-specific Description
X-ray fluorescence microscope located at beamline 2-ID-B at the Advanced Photon Source, Argonne National Laboratory. The beamline is optimized to examine samples over a 1–4 keV energy range using a focused X-ray beam with a spot size of approximately 60 nanometers squared . The energy was calibrated using a NIST standard reference material SRM2910 calcium hydroxyapatite. The whiteline energy of the standard was set to 2153 eV.
Generic Instrument Description
Instruments that generate enlarged images of samples using the phenomena of fluorescence and phosphorescence instead of, or in addition to, reflection and absorption of visible light. Includes conventional and inverted instruments.


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Project Information

P-NEXFS investigation of the influence of aerosol phosphorus on the Mediterranean Sea (Aerosol P)

Coverage: Mediterranean


NSF Award Abstract:

Primary nutrients, such as nitrogen and phosphorus, are critical for all life on earth, and limited quantities in the marine environment can inhibit primary productivity. Atmospheric aerosols are a significant source of these nutrients to nutrient-poor ocean regions, such as the phosphorus-limited Mediterranean Sea. The availability of phosphorus in aerosols has traditionally been linked to the composition and abundance of different phosphorus phases present. Unfortunately, investigating phosphorus composition in aerosols has been challenging due to methodological limitations until recently. In this study, researchers from Georgia Tech will use a new technique known as synchrotron-based P Near Edge X-ray Fluorescence Spectroscopy, in conjunction with X-ray fluorescence microscopy, to examine the diversity of aerosol phosphorus phases delivered to the Mediterranean Sea. By defining the relationship between air mass source region, aerosol composition, and bioavailability, results from this work will improve current knowledge of the factors regulating productivity in the Mediterranean Sea and help to clarify the potential response of this region to different climate change scenarios.

Broader Impacts: In addition to the valuable insights this project will provide on the controls on productivity and nutrient cycling in the Mediterranean Sea, this study will further education of young scientists, broaden participation of under-represented groups in ocean science, and enhance research infrastructure.



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Funding

Funding SourceAward
NSF Division of Ocean Sciences (NSF OCE)

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