http://lod.bco-dmo.org/id/dataset/765868
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2019-04-29
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
Nutrients and pigments from HPLC analysis for fire ash deposition to coastal ocean study, southern California, December 2017
2019-04-22
publication
2019-04-22
revision
Marine Biological Laboratory/Woods Hole Oceanographic Institution Library (MBLWHOI DLA)
2019-09-25
publication
https://doi.org/10.1575/1912/bco-dmo.765868.1
David L. Valentine
University of California-Santa Barbara
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Valentine, D. (2019) Nutrients and pigments from HPLC analysis for fire ash deposition to coastal ocean study, southern California, December 2017. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2019-04-22 [if applicable, indicate subset used]. doi:10.1575/1912/bco-dmo.765868.1 [access date]
Nutrients and pigments Dataset Description: <p>Nutrients and pigments from HPLC analysis for fire ash deposition to coastal ocean study, southern California, December 2017.</p> Methods and Sampling: <p>POC: 500 mL seawater was filtered from depths above 100 m. One L seawater was filtered for depths below 100 m. All seawater samples were filtered gently via vacuum (&lt;10 mm Hg) through 25 mm (0.7 µm) Whatman GF/F filters that were precombusted at 450˚C for 4 hours. Filters were folded in quarters and stored in pre-combusted (450˚C for 4 h) glass scintillation vials. Samples were stored at -20˚C until analysis at the UC Santa Barbara Marine Science Institute Analytical Lab on an Automated Organic Elemental Analyzer following the Dumas combustion method.</p>
<p>Nutrients: 40 mL of seawater was directly filtered from the Niskin bottle through a 0.8 µm polycarbonate filter housed in a 47 mm polycarbonate filter holder into a sterile 50 mL conical centrifuge tube. Samples were stored at -20˚C until analysis at the UC Santa Barbara Marine Science Institute Analytical Lab via flow-injection analysis on a QuickChem 8500 Series 2.</p>
<p>HPLC: Approximately 2 L seawater was filtered through 25 mm (0.7 µm) Whatman GF/F filters. Filters were folded in half, stored in foil packets, and put immediately in liquid nitrogen, where they were kept through shipment to and until analysis at NASA Goddard Space Flight Center. HPLC pigments were analyzed by Crystal Thomas following Van Heukelem and Thomas (2001): https://oceancolor.gsfc.nasa.gov/fsg/hplc/</p>
<p>Quality flags reflect those used by the World Ocean Circulation Experiment (WOCE):<br />
1: sample taken<br />
2: acceptable measurement<br />
3. questionable measurement<br />
4. bad measurement<br />
5. not reported<br />
9. no sample drawn</p>
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1821916 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1821916
completed
David L. Valentine
University of California-Santa Barbara
805-893-2973
Department of Earth Science 1006 Webb Hall
Santa Barbara
CA
93106
USA
valentine@ucsb.edu
pointOfContact
asNeeded
Dataset Version: 1
Unknown
Cruise
Station
Time_Stamp
Latitude
Longitude
Bottom_Z
CruiseCN
Niskin
Target_Z
Conductivity
BeamAt
BeamT
Density00
Z
Fluorescence
Oxygen
Par
Salinity
Temperature
Pressure
Neutral_Density
Sigma_Theta
Potential_Temp
PO4
PO4_QF
SiO4
SiO4_QF
NO2
NO2_QF
NO2_NO3
NO2_NO3_QF
NH4
NH4_QF
POC
POC_QF
PON
PON_QF
TChl_a
TChl_b
TChl_c
Alpha_beta_Car
But_fuco
Hex_fuco
Allo
Diadino
Diato
Fuco
Perid
Zea
MV_Chl_a
DV_Chl_a
Chlide_a
MV_Chl_b
DV_Chl_b
Chl_c2
Chl_c3
Lut
Neo
Viola
Phytin_a
Phide_a
Pras
theme
None, User defined
Cruise identfier
station
ISO_DateTime_Local
latitude
longitude
depth_w
cast
bottle
depth
conductivity
beam attenuation
transmission
density
fluorescence
dissolved Oxygen
PAR_photons
salinity
water temperature at measurement depth
water pressure
sigma-t
potential temperature
reactive phosphorus (PO4)
quality flag
Silicate (reactive silica)
Nitrite
nitrate plus nitrite
Ammonium
particulate organic Carbon (POC)
particulate organic nitrogen
sum of chlorophyll a like compounds
chlorophyll b
chlorophyll c total
carotene
19-prime-butanoyloxyfucoxanthin
19-prime-hexanoyloxyfucoxanthin
alloxanthin
diadinoxanthin
diatoxanthin
fucoxanthin
peridinin
zeaxanthin
monovinyl chlorophyll a
divinyl chlorophyll a
chlorophyllide a
monovinyl chlorophyll b
divinyl chlorophyll b
chlorophyll c2
chlorophyll c3
lutein
neoxanthin
violaxanthin
p_phytin_a
p_phorbide_a
prasinoxanthin
featureType
BCO-DMO Standard Parameters
CTD Sea-Bird SBE 911plus
Niskin bottle
instrument
BCO-DMO Standard Instruments
SR1718
service
Deployment Activity
San Diego
place
Locations
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
RAPID: Biogeochemical effects of fire ash deposition to the coastal ocean, in response to the 2017 Southern California fires
https://osprey.bco-dmo.org/project/757698
RAPID: Biogeochemical effects of fire ash deposition to the coastal ocean, in response to the 2017 Southern California fires
<p>NSF Award Abstract:</p>
<p>Massive wildfires in coastal regions cause ash to fall into the ocean, with unknown impacts. Ash contains chemical elements and materials that can encourage the growth of microscopic organisms in the surface ocean. The Thomas Fire has burned over 240,000 acres in southern California since Dec 4, 2017. The winds have carried a plume of smoke, ash and soot more than 1000 km over the Santa Barbara Channel. The intellectual merit of this RAPID project focuses on the impact of fire ash supply to coastal ocean ecosystems, by studying the 2017 Thomas Fire. This is achieved through a combination of experiments and environmental measurements, including an oceanographic expedition to the affected area aboard the R/V Sally Ride. The broader impacts of this award include the shipboard training of more than twelve graduate students as well as providing insight as to effects of the Thomas Fire on the coastal ocean.</p>
<p>Massive wildfires can couple terrestrial ecosystems to coastal ocean ecosystems through depositional and runoff processes. The Thomas Fire, which began on Dec 4, 2017, has burned over 240,000 acres and the persistent offshore winds created a plume of smoke, ash and soot that extended over 1000 km off shore. This unfortunate circumstance provides an opportunity to investigate the impact of ash deposition on the coastal ocean. This research entails a series of incubation experiments and measurements designed to assess the impact of fire ash deposition on the biogeochemistry of the coastal ocean. Specifically, the research tests the hypothesis that the deposition of wildfire-derived particulate matter to the coastal ocean impacts the planktonic communities of the upper water column, providing nutrients that facilitate blooms of phytoplankton, leaching dissolved organic carbon to surface waters that feeds heterotrophic bacterial populations, and serving as a source of sinking particulate matter that feeds heterotrophic bacterial populations deeper in the water column. These hypotheses are tested through a series of experiments at sea and in the home laboratories, and through shipboard measurements and analysis of samples collected from impacted waters.</p>
FADCO
largerWorkCitation
project
eng; USA
oceans
San Diego
-120.072
-117.734
32.867
34.367
2017-12-16
2017-12-22
Santa Barbara Channel
0
BCO-DMO catalogue of parameters from Nutrients and pigments from HPLC analysis for fire ash deposition to coastal ocean study, southern California, December 2017
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/765875.rdf
Name: Cruise
Units: unitless
Description: <p>Cruise Number</p>
http://lod.bco-dmo.org/id/dataset-parameter/765876.rdf
Name: Station
Units: unitless
Description: <p>Station Number</p>
http://lod.bco-dmo.org/id/dataset-parameter/765877.rdf
Name: Time_Stamp
Units: unitless
Description: <p>Date & Time formatted as yyyy-mm-ddThh:mm</p>
http://lod.bco-dmo.org/id/dataset-parameter/765878.rdf
Name: Latitude
Units: decimal degrees
Description: <p>latitude; north is positive</p>
http://lod.bco-dmo.org/id/dataset-parameter/765879.rdf
Name: Longitude
Units: decimal degrees
Description: <p>longitude; east is positive</p>
http://lod.bco-dmo.org/id/dataset-parameter/765880.rdf
Name: Bottom_Z
Units: meters
Description: <p>Bottom Depth</p>
http://lod.bco-dmo.org/id/dataset-parameter/765881.rdf
Name: CruiseCN
Units: unitless
Description: <p>Cruise Cast Number</p>
http://lod.bco-dmo.org/id/dataset-parameter/765882.rdf
Name: Niskin
Units: unitless
Description: <p>Niskin Bottle Number</p>
http://lod.bco-dmo.org/id/dataset-parameter/765883.rdf
Name: Target_Z
Units: meters
Description: <p>Niskin Target Depth</p>
http://lod.bco-dmo.org/id/dataset-parameter/765884.rdf
Name: Conductivity
Units: S/m
Description: <p>conductivity from sensor</p>
http://lod.bco-dmo.org/id/dataset-parameter/765885.rdf
Name: BeamAt
Units: 1/m
Description: <p>Beam Attenuation from sensor</p>
http://lod.bco-dmo.org/id/dataset-parameter/765886.rdf
Name: BeamT
Units: unitless
Description: <p>percent Beam Transmission from sensor</p>
http://lod.bco-dmo.org/id/dataset-parameter/765887.rdf
Name: Density00
Units: kg m3
Description: <p>Density from sensor</p>
http://lod.bco-dmo.org/id/dataset-parameter/765888.rdf
Name: Z
Units: meters
Description: <p>Depth from sensor</p>
http://lod.bco-dmo.org/id/dataset-parameter/765889.rdf
Name: Fluorescence
Units: mg m-3
Description: <p>fluorescence from sensor</p>
http://lod.bco-dmo.org/id/dataset-parameter/765890.rdf
Name: Oxygen
Units: ml L-1
Description: <p>Oxygen from sensor</p>
http://lod.bco-dmo.org/id/dataset-parameter/765891.rdf
Name: Par
Units: umol photons m-2 s-1
Description: <p>Photosynthetically Available Radiation</p>
http://lod.bco-dmo.org/id/dataset-parameter/765892.rdf
Name: Salinity
Units: psu
Description: <p>salinity</p>
http://lod.bco-dmo.org/id/dataset-parameter/765893.rdf
Name: Temperature
Units: degrees C
Description: <p>temperature</p>
http://lod.bco-dmo.org/id/dataset-parameter/765894.rdf
Name: Pressure
Units: db
Description: <p>pressure</p>
http://lod.bco-dmo.org/id/dataset-parameter/765895.rdf
Name: Neutral_Density
Units: kg m3
Description: <p>neutral density</p>
http://lod.bco-dmo.org/id/dataset-parameter/765896.rdf
Name: Sigma_Theta
Units: kg m3
Description: <p>potential density</p>
http://lod.bco-dmo.org/id/dataset-parameter/765897.rdf
Name: Potential_Temp
Units: degrees C
Description: <p>potential temperature</p>
http://lod.bco-dmo.org/id/dataset-parameter/765898.rdf
Name: PO4
Units: umol P L-1
Description: <p>Phosphate</p>
http://lod.bco-dmo.org/id/dataset-parameter/765899.rdf
Name: PO4_QF
Units: unitless
Description: <p>Phosphate Quality Flag</p>
http://lod.bco-dmo.org/id/dataset-parameter/765900.rdf
Name: SiO4
Units: umol Si L-1
Description: <p>Silicate</p>
http://lod.bco-dmo.org/id/dataset-parameter/765901.rdf
Name: SiO4_QF
Units: unitless
Description: <p>Silicate Quality Flag</p>
http://lod.bco-dmo.org/id/dataset-parameter/765902.rdf
Name: NO2
Units: umol N L-1
Description: <p>Nitrite</p>
http://lod.bco-dmo.org/id/dataset-parameter/765903.rdf
Name: NO2_QF
Units: unitless
Description: <p>Nitrite Quality Flag</p>
http://lod.bco-dmo.org/id/dataset-parameter/765904.rdf
Name: NO2_NO3
Units: umol N L-1
Description: <p>Nitrite + Nitrate</p>
http://lod.bco-dmo.org/id/dataset-parameter/765905.rdf
Name: NO2_NO3_QF
Units: unitless
Description: <p>Nitrite + Nitrate Quality Flag</p>
http://lod.bco-dmo.org/id/dataset-parameter/765906.rdf
Name: NH4
Units: umol N L-1
Description: <p>Ammonia</p>
http://lod.bco-dmo.org/id/dataset-parameter/765907.rdf
Name: NH4_QF
Units: unitless
Description: <p>Ammonia Quality Flag</p>
http://lod.bco-dmo.org/id/dataset-parameter/765908.rdf
Name: POC
Units: ug L-1
Description: <p>Particulate Organic Carbon</p>
http://lod.bco-dmo.org/id/dataset-parameter/765909.rdf
Name: POC_QF
Units: unitless
Description: <p>Particulate Organic Carbon Quality Flag</p>
http://lod.bco-dmo.org/id/dataset-parameter/765910.rdf
Name: PON
Units: ug L-1
Description: <p>Particulate Organic Nitrogen</p>
http://lod.bco-dmo.org/id/dataset-parameter/765911.rdf
Name: PON_QF
Units: unitless
Description: <p>Particulate Organic Nitrogen Quality Flag</p>
http://lod.bco-dmo.org/id/dataset-parameter/765912.rdf
Name: TChl_a
Units: mg m-3
Description: <p>Chlorophyll a from HPLC</p>
http://lod.bco-dmo.org/id/dataset-parameter/765913.rdf
Name: TChl_b
Units: mg m-3
Description: <p>Chlorophyll b from HPLC</p>
http://lod.bco-dmo.org/id/dataset-parameter/765914.rdf
Name: TChl_c
Units: mg m-3
Description: <p>Chlorophyll c from HPLC</p>
http://lod.bco-dmo.org/id/dataset-parameter/765915.rdf
Name: Alpha_beta_Car
Units: mg m-3
Description: <p>Alpha beta carotene from HPLC</p>
http://lod.bco-dmo.org/id/dataset-parameter/765916.rdf
Name: But_fuco
Units: mg m-3
Description: <p>19'-Butanoyloxyfucoxanthin from HPLC</p>
http://lod.bco-dmo.org/id/dataset-parameter/765917.rdf
Name: Hex_fuco
Units: mg m-3
Description: <p>19'-hexanoyloxyfucoxanthin from HPLC</p>
http://lod.bco-dmo.org/id/dataset-parameter/765918.rdf
Name: Allo
Units: mg m-3
Description: <p>Alloxanthin from HPLC</p>
http://lod.bco-dmo.org/id/dataset-parameter/765919.rdf
Name: Diadino
Units: mg m-3
Description: <p>Diadinoxanthin from HPLC</p>
http://lod.bco-dmo.org/id/dataset-parameter/765920.rdf
Name: Diato
Units: mg m-3
Description: <p>Diatoxanthin from HPLC</p>
http://lod.bco-dmo.org/id/dataset-parameter/765921.rdf
Name: Fuco
Units: mg m-3
Description: <p>Fucoxanthin from HPLC</p>
http://lod.bco-dmo.org/id/dataset-parameter/765922.rdf
Name: Perid
Units: mg m-3
Description: <p>Peridinin from HPLC</p>
http://lod.bco-dmo.org/id/dataset-parameter/765923.rdf
Name: Zea
Units: mg m-3
Description: <p>Zeaxanthin from HPLC</p>
http://lod.bco-dmo.org/id/dataset-parameter/765924.rdf
Name: MV_Chl_a
Units: mg m-3
Description: <p>Monovinyl Chlorphyll a from HPLC</p>
http://lod.bco-dmo.org/id/dataset-parameter/765925.rdf
Name: DV_Chl_a
Units: mg m-3
Description: <p>Divinyl Chlorophyll a from HPLC</p>
http://lod.bco-dmo.org/id/dataset-parameter/765926.rdf
Name: Chlide_a
Units: mg m-3
Description: <p>Chlorophyllide from HPLC</p>
http://lod.bco-dmo.org/id/dataset-parameter/765927.rdf
Name: MV_Chl_b
Units: mg m-3
Description: <p>Monovinyl Chlorophyll b from HPLC</p>
http://lod.bco-dmo.org/id/dataset-parameter/765928.rdf
Name: DV_Chl_b
Units: mg m-3
Description: <p>Divinyl Chlorophyll b from HPLC</p>
http://lod.bco-dmo.org/id/dataset-parameter/765929.rdf
Name: Chl_c2
Units: mg m-3
Description: <p>Chlorophyll C2 from HPLC</p>
http://lod.bco-dmo.org/id/dataset-parameter/765930.rdf
Name: Chl_c3
Units: mg m-3
Description: <p>Chlorophyll C3 from HPLC</p>
http://lod.bco-dmo.org/id/dataset-parameter/765931.rdf
Name: Lut
Units: mg m-3
Description: <p>Lutein [ug/L]</p>
http://lod.bco-dmo.org/id/dataset-parameter/765932.rdf
Name: Neo
Units: mg m-3
Description: <p>Neoxanthin from HPLC</p>
http://lod.bco-dmo.org/id/dataset-parameter/765933.rdf
Name: Viola
Units: mg m-3
Description: <p>Violaxanthin from HPLC</p>
http://lod.bco-dmo.org/id/dataset-parameter/765934.rdf
Name: Phytin_a
Units: mg m-3
Description: <p>Total pheophytin a from HPLC</p>
http://lod.bco-dmo.org/id/dataset-parameter/765935.rdf
Name: Phide_a
Units: mg m-3
Description: <p>Total pheophorbide a from HPLC</p>
http://lod.bco-dmo.org/id/dataset-parameter/765936.rdf
Name: Pras
Units: mg m-3
Description: <p>Prasinoxanthin from HPLC</p>
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
237008
https://darchive.mblwhoilibrary.org/bitstream/1912/24599/1/dataset-765868_nutrients-and-pigments__v1.tsv
download
https://doi.org/10.1575/1912/bco-dmo.765868.1
download
onLine
dataset
<p>POC: 500 mL seawater was filtered from depths above 100 m. One L seawater was filtered for depths below 100 m. All seawater samples were filtered gently via vacuum (&lt;10 mm Hg) through 25 mm (0.7 µm) Whatman GF/F filters that were precombusted at 450˚C for 4 hours. Filters were folded in quarters and stored in pre-combusted (450˚C for 4 h) glass scintillation vials. Samples were stored at -20˚C until analysis at the UC Santa Barbara Marine Science Institute Analytical Lab on an Automated Organic Elemental Analyzer following the Dumas combustion method.</p>
<p>Nutrients: 40 mL of seawater was directly filtered from the Niskin bottle through a 0.8 µm polycarbonate filter housed in a 47 mm polycarbonate filter holder into a sterile 50 mL conical centrifuge tube. Samples were stored at -20˚C until analysis at the UC Santa Barbara Marine Science Institute Analytical Lab via flow-injection analysis on a QuickChem 8500 Series 2.</p>
<p>HPLC: Approximately 2 L seawater was filtered through 25 mm (0.7 µm) Whatman GF/F filters. Filters were folded in half, stored in foil packets, and put immediately in liquid nitrogen, where they were kept through shipment to and until analysis at NASA Goddard Space Flight Center. HPLC pigments were analyzed by Crystal Thomas following Van Heukelem and Thomas (2001): https://oceancolor.gsfc.nasa.gov/fsg/hplc/</p>
<p>Quality flags reflect those used by the World Ocean Circulation Experiment (WOCE):<br />
1: sample taken<br />
2: acceptable measurement<br />
3. questionable measurement<br />
4. bad measurement<br />
5. not reported<br />
9. no sample drawn</p>
Specified by the Principal Investigator(s)
<p><strong>BCO-DMO Processing Notes:</strong><br />
- added conventional header with dataset name, PI name, version date</p>
<p>&nbsp;</p>
Specified by the Principal Investigator(s)
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
PI Supplied Instrument Name: Instrument Name: CTD Sea-Bird SBE 911plus Instrument Short Name:CTD SBE 911plus Instrument Description: The Sea-Bird SBE 911 plus is a type of CTD instrument package for continuous measurement of conductivity, temperature and pressure. The SBE 911 plus includes the SBE 9plus Underwater Unit and the SBE 11plus Deck Unit (for real-time readout using conductive wire) for deployment from a vessel. The combination of the SBE 9 plus and SBE 11 plus is called a SBE 911 plus. The SBE 9 plus uses Sea-Bird's standard modular temperature and conductivity sensors (SBE 3 plus and SBE 4). The SBE 9 plus CTD can be configured with up to eight auxiliary sensors to measure other parameters including dissolved oxygen, pH, turbidity, fluorescence, light (PAR), light transmission, etc.). more information from Sea-Bird Electronics Community Standard Description: http://vocab.nerc.ac.uk/collection/L22/current/TOOL0058/
PI Supplied Instrument Name: Instrument Name: Niskin bottle Instrument Short Name:Niskin bottle Instrument Description: A Niskin bottle (a next generation water sampler based on the Nansen bottle) is a cylindrical, non-metallic water collection device with stoppers at both ends. The bottles can be attached individually on a hydrowire or deployed in 12, 24, or 36 bottle Rosette systems mounted on a frame and combined with a CTD. Niskin bottles are used to collect discrete water samples for a range of measurements including pigments, nutrients, plankton, etc. Community Standard Description: http://vocab.nerc.ac.uk/collection/L22/current/TOOL0412/
Cruise: SR1718
SR1718
R/V Sally Ride
Community Standard Description
International Council for the Exploration of the Sea
R/V Sally Ride
vessel
SR1718
Nicholas Baetge
University of California-Santa Barbara
R/V Sally Ride
Community Standard Description
International Council for the Exploration of the Sea
R/V Sally Ride
vessel