http://lod.bco-dmo.org/id/dataset/777144
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2019-09-20
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
Carbonate chemistry data from static and fluctuating pCO2 x dissolved oxygen (DO) experiments on Menidia menidia
2019-09-20
publication
2019-09-20
revision
Marine Biological Laboratory/Woods Hole Oceanographic Institution Library (MBLWHOI DLA)
2019-10-31
publication
https://doi.org/10.1575/1912/bco-dmo.777144.1
Hannes Baumann
University of Connecticut
principalInvestigator
Emma L. Cross
University of Connecticut
principalInvestigator
Christopher S. Murray
University of Connecticut
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Baumann, H., Cross, E. (2019) Carbonate chemistry data from static and fluctuating pCO2 x dissolved oxygen (DO) experiments on Menidia menidia. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2019-09-20 [if applicable, indicate subset used]. doi:10.1575/1912/bco-dmo.777144.1 [access date]
Carbonate chemistry data from static and fluctuating pCO2 x dissolved oxygen (DO) experiments on Menidia menidia Dataset Description: <p>Carbonate chemistry data from static and fluctuating pCO2 x dissolved oxygen (DO) experiments on Menidia menidia. Four separate experiments were conducted over two consecutive years to determine the effects of static and fluctuating pCO2 x DO conditions on the early life survival and growth of the coastal forage fish, M. menidia.&nbsp;</p>
<p>See related datasets: <a href="https://www.bco-dmo.org/dataset/777117" target="_blank">survival</a> and <a href="https://www.bco-dmo.org/dataset/777130" target="_blank">growth</a>.</p> Methods and Sampling: <p>Wild adults were collected using a 30 x 2 m beach seine and strip-spawned in the laboratory the following day. 100 embryos were then placed in each replicate across 9 recirculating systems of different pCO2 x DO conditions (control, intermediate, extreme) and cycling patterns (static, small diel fluctuation, large diel fluctuation and tidal fluctuation).</p>
<p>pCO2 x DO conditions were measured every hour for each tank and adjusted to the pre-determined conditions via the injection of carbon dioxide, nitrogen gas and/or CO2-stripped air.&nbsp;LabView software (National Instruments) was used to control sampling pumps and gas and water solenoids.</p>
<p>Seawater samples of each tank were collected three times throughout each experiment and stored in 4°C for subsequent alkalinity measurements up to two weeks after the experiment finished. For more details please see Cross et al. (submitted).</p>
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1536165 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1536165
completed
Hannes Baumann
University of Connecticut
860-405-9297
Department of Marine Sciences 1080 Shennecossett Road
Groton
CT
06340-6048
USA
hannes.baumann@uconn.edu
pointOfContact
Emma L. Cross
University of Connecticut
860-405-9155
Department of Marine Sciences 1080 Shennecossett Road
Groton
CT
06340
USA
e.l.cross@cantab.net
pointOfContact
Christopher S. Murray
University of Connecticut
christopher.murray@whoi.edu
pointOfContact
asNeeded
Dataset Version: 1
Unknown
Experiment
Experiment_descrip
Treatment
Cycling_Pattern
Metric
Measured_pH
Measured_pH_SD
Measured_DO
Measured_DO_SD
pCO2
pCO2_SD
AT
AT_SD
Temperature
Temperature_SD
Salinity
Salinity_SD
Hach LDO Model 2
Hach pHD digital electrode
Metler Toledo G20 Potentiometric Titrator
Aqualogic Deltastar
theme
None, User defined
experiment id
treatment
sample type
pH
dissolved Oxygen
Partial pressure of CO2
total alkalinity (TA)
water temperature at measurement depth
salinity
featureType
BCO-DMO Standard Parameters
Oxygen Sensor
pH Sensor
Titrator
Water Temperature Sensor
instrument
BCO-DMO Standard Instruments
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
Collaborative research: Understanding the effects of acidification and hypoxia within and across generations in a coastal marine fish
https://osprey.bco-dmo.org/project/650184
Collaborative research: Understanding the effects of acidification and hypoxia within and across generations in a coastal marine fish
<p><em>Description from NSF award abstract:</em><br />
Coastal marine ecosystems provide a number of important services and resources for humans, and at the same time, coastal waters are subject to environmental stressors such as increases in ocean acidification and reductions in dissolved oxygen. The effects of these stressors on coastal marine organisms remain poorly understood because most research to date has examined the sensitivity of species to one factor, but not to more than one in combination. This project will determine how a model fish species, the Atlantic silverside, will respond to observed and predicted levels of dissolved carbon dioxide (CO2) and oxygen (O2). Shorter-term experiments will measure embryo and larval survival, growth, and metabolism, and determine whether parents experiencing stressful conditions produce more robust offspring. Longer-term experiments will study the consequences of ocean acidification over the entire life span by quantifying the effects of high-CO2 conditions on the ratio of males to females, lifetime growth, and reproductive investment. These studies will provide a more comprehensive view of how multiple stressors may impact populations of Atlantic silversides and potentially other important forage fish species. This collaborative project will support and train three graduate students at the University of Connecticut and the Stony Brook University (NY), two institutions that attract students from minority groups. It will also provide a variety of opportunities for undergraduates to participate in research and the public to learn about the study, through summer research projects, incorporation in the "Women in Science and Engineering" program, and interactive displays of environmental data from monitoring buoys. The two early-career investigators are committed to increasing ocean literacy and awareness of NSF-funded research through public talks and presentations.</p>
<p>This project responds to the recognized need for multi-stressor assessments of species sensitivities to anthropogenic environmental change. It will combine environmental monitoring with advanced experimental approaches to characterize early and whole life consequences of acidification and hypoxia in the Atlantic silverside (Menidia menidia), a valued model species and important forage fish along most of the US east coast. Experiments will employ a newly constructed, computer-controlled fish rearing system to allow independent and combined manipulation of seawater pCO2 and dissolved oxygen (DO) content and the application of static and fluctuating pCO2 and DO levels that were chosen to represent contemporary and potential future scenarios in productive coastal habitats. First CO2, DO, and CO2 × DO dependent reaction norms will be quantified for fitness-relevant early life history (ELH) traits including pre- and post-hatch survival, time to hatch, post-hatch growth, by rearing offspring collected from wild adults from fertilization to 20 days post hatch (dph) using a full factorial design of 3 CO2 × 3 DO levels. Second, the effects of tidal and diel CO2 × DO fluctuations of different amplitudes on silverside ELH traits will be quantified. To address knowledge gaps regarding the CO2-sensitivity in this species, laboratory manipulations of adult spawner environments and reciprocal offspring exposure experiments will elucidate the role of transgenerational plasticity as a potential short-term mechanism to cope with changing environments. To better understand the mechanisms of fish early life CO2-sensitivity, the effects of temperature × CO2 on pre- and post-hatch metabolism will be robustly quantified. The final objective is to rear silversides from fertilization to maturity under different CO2 levels and assess potential CO2-effects on sex ratio and whole life growth and fecundity.</p>
<p><strong>Related references:</strong><br />
Gobler, C.J. and Baumann, H. (2016) Hypoxia and acidification in ocean ecosystems: Coupled dynamics and effects on marine life. Biology Letters 12:20150976. doi:<a href="http://dx.doi.org/10.1098/rsbl.2015.0976" target="_blank">10.1098/rsbl.2015.0976</a></p>
<p>Baumann, H. (2016) Combined effects of ocean acidification, warming, and hypoxia on marine organisms. Limnology and Oceanography e-Lectures 6:1-43. doi:<a href="http://dx.doi.org/10.1002/loe2.10002" target="_blank">10.1002/loe2.10002</a></p>
<p>Depasquale, E., Baumann, H., and Gobler, C.J. (2015) Variation in early life stage vulnerability among Northwest Atlantic estuarine forage fish to ocean acidification and low oxygen Marine Ecology Progress Series 523: 145–156.doi:<a href="http://dx.doi.org/10.3354/meps11142" target="_blank">10.3354/meps11142</a></p>
HYPOA
largerWorkCitation
project
eng; USA
oceans
2017-05-09
2019-07-03
Eastern Long Island Sound, CT, USA
0
BCO-DMO catalogue of parameters from Carbonate chemistry data from static and fluctuating pCO2 x dissolved oxygen (DO) experiments on Menidia menidia
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/777156.rdf
Name: Experiment
Units: unitless
Description: <p>Experiment number</p>
http://lod.bco-dmo.org/id/dataset-parameter/777157.rdf
Name: Experiment_descrip
Units: unitless
Description: <p>Description of experiment</p>
http://lod.bco-dmo.org/id/dataset-parameter/777158.rdf
Name: Treatment
Units: unitless
Description: <p>Experimental treatment/conditions</p>
http://lod.bco-dmo.org/id/dataset-parameter/777159.rdf
Name: Cycling_Pattern
Units: unitless
Description: <p>Experimental cycling pattern</p>
http://lod.bco-dmo.org/id/dataset-parameter/777160.rdf
Name: Metric
Units: unitless
Description: <p>Indicates whether values are mean, min, or max; applicable only to Measured_pH, Measured_DO, and pCO2 columns of experiments three and four</p>
http://lod.bco-dmo.org/id/dataset-parameter/777161.rdf
Name: Measured_pH
Units: pH scale, NIST
Description: <p>Mean of hourly pH measurements from a computer-controlled pH/DO manipulation system using a Hach pH probe</p>
http://lod.bco-dmo.org/id/dataset-parameter/777162.rdf
Name: Measured_pH_SD
Units: pH scale, NIST
Description: <p>Standard deviation (S.D.) of Measured_pH</p>
http://lod.bco-dmo.org/id/dataset-parameter/777163.rdf
Name: Measured_DO
Units: milligrams per liter (mg L-1)
Description: <p>Mean of hourly dissolved oxygen measurements from a computer-controlled pH/DO manipulation system using a Hach DO probe</p>
http://lod.bco-dmo.org/id/dataset-parameter/777164.rdf
Name: Measured_DO_SD
Units: milligrams per liter (mg L-1)
Description: <p>Standard deviation (S.D.) of Measured_DO</p>
http://lod.bco-dmo.org/id/dataset-parameter/777165.rdf
Name: pCO2
Units: microatmospheres (uatm)
Description: <p>Mean of partial pressure of CO2 calculated from alkalinity and pH measurements in CO2SYS v2.1</p>
http://lod.bco-dmo.org/id/dataset-parameter/777166.rdf
Name: pCO2_SD
Units: microatmospheres (uatm)
Description: <p>Standard deviation (S.D.) of pCO2</p>
http://lod.bco-dmo.org/id/dataset-parameter/777167.rdf
Name: AT
Units: micromoles per kilogram (umol kg-1)
Description: <p>Mean of alkalinity measurements from a Metler Toledo G20 Potentiometric titrator</p>
http://lod.bco-dmo.org/id/dataset-parameter/777168.rdf
Name: AT_SD
Units: micromoles per kilogram (umol kg-1)
Description: <p>Standard deviation (S.D.) of AT</p>
http://lod.bco-dmo.org/id/dataset-parameter/777169.rdf
Name: Temperature
Units: degrees Celsius
Description: <p>Mean of hourly temperature measurements from a a computer-controlled pH/DO manipulation system using a Hach DO probe</p>
http://lod.bco-dmo.org/id/dataset-parameter/777170.rdf
Name: Temperature_SD
Units: degrees Celsius
Description: <p>Standard deviation (S.D.) of Temperature</p>
http://lod.bco-dmo.org/id/dataset-parameter/777171.rdf
Name: Salinity
Units: psu
Description: <p>Mean of daily salinity measurements from a refractometer</p>
http://lod.bco-dmo.org/id/dataset-parameter/777172.rdf
Name: Salinity_SD
Units: psu
Description: <p>Standard deviation (S.D.) of Salinity</p>
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
8936
https://darchive.mblwhoilibrary.org/bitstream/1912/24757/1/dataset-777144_carbonate-chemistry-pco2-x-do-effects-menidia-menidia__v1.tsv
download
https://doi.org/10.1575/1912/bco-dmo.777144.1
download
onLine
dataset
<p>Wild adults were collected using a 30 x 2 m beach seine and strip-spawned in the laboratory the following day. 100 embryos were then placed in each replicate across 9 recirculating systems of different pCO2 x DO conditions (control, intermediate, extreme) and cycling patterns (static, small diel fluctuation, large diel fluctuation and tidal fluctuation).</p>
<p>pCO2 x DO conditions were measured every hour for each tank and adjusted to the pre-determined conditions via the injection of carbon dioxide, nitrogen gas and/or CO2-stripped air.&nbsp;LabView software (National Instruments) was used to control sampling pumps and gas and water solenoids.</p>
<p>Seawater samples of each tank were collected three times throughout each experiment and stored in 4°C for subsequent alkalinity measurements up to two weeks after the experiment finished. For more details please see Cross et al. (submitted).</p>
Specified by the Principal Investigator(s)
<p>Data processing:&nbsp;CO2SYS version 2.1 was used to calculate pCO2 in the carbonate chemistry tables.</p>
Specified by the Principal Investigator(s)
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
Hach LDO Model 2
Hach LDO Model 2
PI Supplied Instrument Name: Hach LDO Model 2 PI Supplied Instrument Description:Dissolved oxygen (DO) – Optical DO probe (Hach LDO Model 2) Instrument Name: Oxygen Sensor Instrument Short Name:Dissolved Oxygen Sensor Instrument Description: An electronic device that measures the proportion of oxygen (O2) in the gas or liquid being analyzed
Hach pHD digital electrode
Hach pHD digital electrode
PI Supplied Instrument Name: Hach pHD digital electrode PI Supplied Instrument Description:pHNIST - Hach pHD digital electrode - calibrated twice weekly using NIST 2-point pH buffers Instrument Name: pH Sensor Instrument Short Name:pH Sensor Instrument Description: An instrument that measures the hydrogen ion activity in solutions.
The overall concentration of hydrogen ions is inversely related to its pH. The pH scale ranges from 0 to 14 and indicates whether acidic (more H+) or basic (less H+).
Metler Toledo G20 Potentiometric Titrator
Metler Toledo G20 Potentiometric Titrator
PI Supplied Instrument Name: Metler Toledo G20 Potentiometric Titrator PI Supplied Instrument Description:Alkalinity – Metler Toledo G20 Potentiometric Titrator calibrated with certified reference material from Dr. Andrew Dickson, University of California San Diego Instrument Name: Titrator Instrument Short Name:Titrator Instrument Description: Titrators are instruments that incrementally add quantified aliquots of a reagent to a sample until the end-point of a chemical reaction is reached. Community Standard Description: http://vocab.nerc.ac.uk/collection/L05/current/LAB12/
Aqualogic Deltastar
Aqualogic Deltastar
PI Supplied Instrument Name: Aqualogic Deltastar PI Supplied Instrument Description:Temperature - Aqualogic thermostats connected to submersible heaters and chillers (Deltastar) Instrument Name: Water Temperature Sensor Instrument Short Name:Water Temp Sensor Instrument Description: General term for an instrument that measures the temperature of the water with which it is in contact (thermometer). Community Standard Description: http://vocab.nerc.ac.uk/collection/L05/current/134/