http://lod.bco-dmo.org/id/dataset/826183
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2020-10-07
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
Carbonate chemistry from Niskin bottle samples collected at Twanoh buoy in Hood Canal during R/V Clifford A. Barnes cruises CB1077 and CB1072 in 2017
2020-11-10
publication
2020-11-10
revision
Marine Biological Laboratory/Woods Hole Oceanographic Institution Library (MBLWHOI DLA)
2020-11-10
publication
https://doi.org/10.26008/1912/bco-dmo.826183.1
Julie E. Keister
University of Washington
principalInvestigator
Daniel Grunbaum
University of Washington
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Keister, J. E., Grunbaum, D. (2020) Carbonate chemistry from Niskin bottle samples collected at Twanoh buoy in Hood Canal during R/V Clifford A. Barnes cruises CB1077 and CB1072 in 2017. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2020-11-10 [if applicable, indicate subset used]. doi:10.26008/1912/bco-dmo.826183.1 [access date]
Hood Canal carbonate chemistry from Niskin bottle samples collected in 2017 Dataset Description: <p>Hood Canal carbonate chemistry from Niskin bottle samples collected in 2017 at&nbsp;Twanoh buoy (47.38, -123.01).</p> Methods and Sampling: <p>Water for carbonate chemistry data were collected and analyzed according to Dickson et al., (2007).</p>
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1657992 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1657992
completed
Julie E. Keister
University of Washington
206-543-7620
School of Oceanography Box 357940
Seattle
WA
98195
United States
jkeister@uw.edu
pointOfContact
Daniel Grunbaum
University of Washington
206-221-6594
School of Oceanography Box 357940
Seattle
WA
98195
USA
random@uw.edu
pointOfContact
asNeeded
Dataset Version: 1
Unknown
Date_Collected
Date_Run
Cruise
Station
Latitude
Longitude
Time_PDT
Depth
insitu_Temp
Salinity
DIC_umol_kg
AT
Patm
P
pH
CO2
fCO2
pCO2
fCO2pot
pCO2pot
fCO2insitu
pCO2insitu
HCO3
CO3
DIC_mol_kg
ALK
OmegaAragonite
OmegaCalcite
UIC model CM5015
Niskin bottles
theme
None, User defined
date
Cruise identfier
station
latitude
longitude
time of day
depth
water temperature at measurement depth
salinity
dissolved inorganic Carbon
total alkalinity (TA)
barometric pressure
water pressure
pH
carbon dioxide
fugacity of CO2
Partial pressure of CO2
bicarbonate concentration [HCO3]-
Carbonate concentration [CO3]2-
Aragonite Saturation State
Calcite Saturation State
featureType
BCO-DMO Standard Parameters
CO2 Coulometer
Niskin bottle
instrument
BCO-DMO Standard Instruments
CB1077
CB1072
service
Deployment Activity
Twanoh, Hood Canal, Puget Sound, WA
place
Locations
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
Causes and consequences of hypoxia and pH impacts on zooplankton: Linking movement behavior to vertical distribution.
https://osprey.bco-dmo.org/project/709640
Causes and consequences of hypoxia and pH impacts on zooplankton: Linking movement behavior to vertical distribution.
<p><em>NSF Award Abstract:</em><br />
Low oxygen (hypoxia) and low pH are known to have profound physiological effects on zooplankton, the microscopic animals of the sea. It is likely that many individual zooplankton change vertical mirgration behaviors to reduce or avoid these stresses. However, avoidance responses and their consequences for zooplankton distributions, and for interactions of zooplankton with their predators and prey, are poorly understood. This study will provide information on small-scale behavioral responses of zooplankton to oxygen and pH using video systems deployed in the field in a seasonally hypoxic estuary. The results will deepen our understanding of how zooplankton respond to low oxygen and pH conditions in ways that could profoundly affect marine ecosystems and fisheries through changes in their populations and distributions. This project will train graduate students and will engage K-12 students and teachers in under-served coastal communities by developing ocean technology-based citizen-scientist activities and curricular materials in plankton ecology, ocean change, construction and use of biological sensors, and quantitative analysis of environmental data.</p>
<p>Individual directional motility is a primary mechanism underlying spatio-temporal patterns in zooplankton population distributions. Motility is used by most zooplankton species to select among water column positions that differ in biotic and abiotic variables such as prey, predators, light, oxygen concentration, and pH. Species-specific movement responses to de-oxygenation and acidification are likely mechanisms through which short-term, localized impacts of these stressful conditions on individual zooplankton will be magnified or suppressed as they propagate up to population, community, and ecosystem-level dynamics. This study will quantify responses by key zooplankton species to oxygen and pH using in situ video systems to measure changes in individual behavior in hypoxic, low- pH versus well-oxygenated, high-pH regions of a seasonally hypoxic estuary. Distributions and movements of zooplankton will be quantified using three approaches: 1) an imaging system deployed in situ on a profiling mooring over two summers in a hypoxic region, 2) imagers deployed on Lagrangian drifters to sample simultaneously throughout the water column, and 3) vertically-stratified pumps and net tows to verify species identification and video-based abundance estimates. These field observations will be combined with laboratory analysis of zooplankton movements in oxygen and pH gradients, and with spatially-explicit models to predict how behavioral mechanisms lead to large-scale impacts of environmental stresses.</p>
<p>The following deployments were conducted in 2017 and 2018:<br />
CB1077: <a href="https://www.bco-dmo.org/deployment/735746" target="_blank">https://www.bco-dmo.org/deployment/735746</a><br />
CB1072: <a href="https://www.bco-dmo.org/deployment/735748" target="_blank">https://www.bco-dmo.org/deployment/735748</a><br />
Zoocam_ORCA_Twanoh_2017: <a href="https://www.bco-dmo.org/deployment/735762" target="_blank">https://www.bco-dmo.org/deployment/735762</a><br />
RC0008: <a href="https://www.bco-dmo.org/deployment/775288" target="_blank">https://www.bco-dmo.org/deployment/775288</a><br />
Mooring ORCA_Hoodsport; NANOOS-APL4: <a href="https://www.bco-dmo.org/deployment/775291" target="_blank">https://www.bco-dmo.org/deployment/775291</a></p>
Zooplankton Swimming
largerWorkCitation
project
eng; USA
oceans
Twanoh, Hood Canal, Puget Sound, WA
-123.01
-123.01
47.38
47.38
2017-06-16
2018-07-16
Puget Sound, WA
0
BCO-DMO catalogue of parameters from Carbonate chemistry from Niskin bottle samples collected at Twanoh buoy in Hood Canal during R/V Clifford A. Barnes cruises CB1077 and CB1072 in 2017
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/828348.rdf
Name: Date_Collected
Units: unitless
Description: <p>Date collected (PDT); format: YYYY-MM-DD</p>
http://lod.bco-dmo.org/id/dataset-parameter/828349.rdf
Name: Date_Run
Units: unitless
Description: <p>Date run (PDT); format: YYYY-MM-DD</p>
http://lod.bco-dmo.org/id/dataset-parameter/828350.rdf
Name: Cruise
Units: unitless
Description: <p>Cruise ID</p>
http://lod.bco-dmo.org/id/dataset-parameter/828351.rdf
Name: Station
Units: unitless
Description: <p>Station number</p>
http://lod.bco-dmo.org/id/dataset-parameter/828352.rdf
Name: Latitude
Units: degrees North
Description: <p>Latitude</p>
http://lod.bco-dmo.org/id/dataset-parameter/828353.rdf
Name: Longitude
Units: degrees East
Description: <p>Longitude</p>
http://lod.bco-dmo.org/id/dataset-parameter/828354.rdf
Name: Time_PDT
Units: unitless
Description: <p>Time (PDT); format: hh:mm:ss</p>
http://lod.bco-dmo.org/id/dataset-parameter/828355.rdf
Name: Depth
Units: meters (m)
Description: <p>Depth</p>
http://lod.bco-dmo.org/id/dataset-parameter/828356.rdf
Name: insitu_Temp
Units: degrees Celsius
Description: <p>in situ temperature</p>
http://lod.bco-dmo.org/id/dataset-parameter/828357.rdf
Name: Salinity
Units: PSU
Description: <p>Salinity</p>
http://lod.bco-dmo.org/id/dataset-parameter/828358.rdf
Name: DIC_umol_kg
Units: micromoles per kilogram (umol/kg)
Description: <p>Dissolved inorganic carbon</p>
http://lod.bco-dmo.org/id/dataset-parameter/828359.rdf
Name: AT
Units: micromoles per kilogram (umol/kg)
Description: <p>Total alkalinity</p>
http://lod.bco-dmo.org/id/dataset-parameter/828361.rdf
Name: Patm
Units: atmospheres (atm)
Description: <p>Surface atmosphereic pressure</p>
http://lod.bco-dmo.org/id/dataset-parameter/828362.rdf
Name: P
Units: bars
Description: <p>Hydrostatic pressure</p>
http://lod.bco-dmo.org/id/dataset-parameter/828363.rdf
Name: pH
Units: unitless
Description: <p>pH</p>
http://lod.bco-dmo.org/id/dataset-parameter/828364.rdf
Name: CO2
Units: moles per kilogram (mol/kg)
Description: <p>CO2</p>
http://lod.bco-dmo.org/id/dataset-parameter/828365.rdf
Name: fCO2
Units: microatmospheres (uatm)
Description: <p>Fugacity</p>
http://lod.bco-dmo.org/id/dataset-parameter/828366.rdf
Name: pCO2
Units: microatmospheres (uatm)
Description: <p>Partial pressure</p>
http://lod.bco-dmo.org/id/dataset-parameter/828367.rdf
Name: fCO2pot
Units: microatmospheres (uatm)
Description: <p>Fugacity potential</p>
http://lod.bco-dmo.org/id/dataset-parameter/828368.rdf
Name: pCO2pot
Units: microatmospheres (uatm)
Description: <p>Partial pressure potential</p>
http://lod.bco-dmo.org/id/dataset-parameter/828369.rdf
Name: fCO2insitu
Units: microatmospheres (uatm)
Description: <p>Fugacity in situ</p>
http://lod.bco-dmo.org/id/dataset-parameter/828370.rdf
Name: pCO2insitu
Units: microatmospheres (uatm)
Description: <p>Partial pressure in situ</p>
http://lod.bco-dmo.org/id/dataset-parameter/828371.rdf
Name: HCO3
Units: moles per kilogram (mol/kg)
Description: <p>HCO3</p>
http://lod.bco-dmo.org/id/dataset-parameter/828372.rdf
Name: CO3
Units: moles per kilogram (mol/kg)
Description: <p>CO3</p>
http://lod.bco-dmo.org/id/dataset-parameter/828373.rdf
Name: DIC_mol_kg
Units: moles per kilogram (mol/kg)
Description: <p>Dissolved inorganic carbon</p>
http://lod.bco-dmo.org/id/dataset-parameter/828374.rdf
Name: ALK
Units: moles per kilogram (mol/kg)
Description: <p>Total alkalinity</p>
http://lod.bco-dmo.org/id/dataset-parameter/828375.rdf
Name: OmegaAragonite
Units: omega arg
Description: <p>Aragonite saturation state</p>
http://lod.bco-dmo.org/id/dataset-parameter/828376.rdf
Name: OmegaCalcite
Units: omega cal
Description: <p>Calcite saturation state</p>
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
4209
https://darchive.mblwhoilibrary.org/bitstream/1912/26371/1/dataset-826183_hood-canal-carbonate-chemistry__v1.tsv
download
https://doi.org/10.26008/1912/bco-dmo.826183.1
download
onLine
dataset
<p>Water for carbonate chemistry data were collected and analyzed according to Dickson et al., (2007).</p>
Specified by the Principal Investigator(s)
<p>Carbonate chemistry samples were collected and analyzed according to Dickson et al., (2007). A<sub>T</sub> was measured by open-cell potentiometric titration and C<sub>T</sub> was measured by acidification and quantification using a CO₂ coulometer (UIC model CM5015) at the University of Washington’s School of Oceanography. Certified Reference Materials were analyzed as an independent verification of instrument calibrations (Dickson et al. 2007). We calculated full carbonate parameters from A<sub>T</sub> and C<sub>T</sub> using the R package <em>seacarb</em> and constants from Lueker et al. (2000) and the total pH scale.</p>
<p>The pH data from CTD casts for each cruise should be corrected using an average offset to pH calculated from the five discrete A<sub>T</sub>&nbsp;and C<sub>T</sub>&nbsp;samples from that cruise.</p>
<p><strong>BCO-DMO Processing:</strong><br />
- changed date formats to YYYY-MM-DD;<br />
- renamed fields;<br />
- added Latitude and Longitude columns.</p>
Specified by the Principal Investigator(s)
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
UIC model CM5015
UIC model CM5015
PI Supplied Instrument Name: UIC model CM5015 PI Supplied Instrument Description:AT was measured by open-cell potentiometric titration and CT was measured by acidification and quantification using a CO₂ coulometer (UIC model CM5015) at the University of Washington's School of Oceanography Instrument Name: CO2 Coulometer Instrument Short Name:CO2 coulometer Instrument Description: A CO2 coulometer semi-automatically controls the sample handling and extraction of CO2 from seawater samples. Samples are acidified and the CO2 gas is bubbled into a titration cell where CO2 is converted to hydroxyethylcarbonic acid which is then automatically titrated with a coulometrically-generated base to a colorimetric endpoint. Community Standard Description: http://vocab.nerc.ac.uk/collection/L05/current/LAB12
Niskin bottles
Niskin bottles
PI Supplied Instrument Name: Niskin bottles PI Supplied Instrument Description:Water for carbonate chemistry data were collected with Niskin bottles. Instrument Name: Niskin bottle Instrument Short Name:Niskin bottle Instrument Description: A Niskin bottle (a next generation water sampler based on the Nansen bottle) is a cylindrical, non-metallic water collection device with stoppers at both ends. The bottles can be attached individually on a hydrowire or deployed in 12, 24, or 36 bottle Rosette systems mounted on a frame and combined with a CTD. Niskin bottles are used to collect discrete water samples for a range of measurements including pigments, nutrients, plankton, etc. Community Standard Description: http://vocab.nerc.ac.uk/collection/L22/current/TOOL0412/
Cruise: CB1077
CB1077
R/V Clifford A. Barnes
Community Standard Description
International Council for the Exploration of the Sea
R/V Clifford A. Barnes
vessel
CB1077
Julie E. Keister
University of Washington
Cruise: CB1072
CB1072
R/V Clifford A. Barnes
Community Standard Description
International Council for the Exploration of the Sea
R/V Clifford A. Barnes
vessel
CB1072
Julie E. Keister
University of Washington
R/V Clifford A. Barnes
Community Standard Description
International Council for the Exploration of the Sea
R/V Clifford A. Barnes
vessel