http://lod.bco-dmo.org/id/dataset/826281
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2020-10-09
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
CTD profiles of temperature, oxygen, salinity, density, fluorescence, PAR, and pH collected in Hood Canal on cruises CB1072, CB1077, and RC008 during 2017 and 2018
2020-10-09
publication
2020-10-09
revision
Marine Biological Laboratory/Woods Hole Oceanographic Institution Library (MBLWHOI DLA)
2020-11-10
publication
https://doi.org/10.26008/1912/bco-dmo.826281.1
Julie E. Keister
University of Washington
principalInvestigator
Daniel Grunbaum
University of Washington
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Keister, J. E., Grunbaum, D. (2020) CTD profiles of temperature, oxygen, salinity, density, fluorescence, PAR, and pH collected in Hood Canal on cruises CB1072, CB1077, and RC008 during 2017 and 2018. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2020-10-09 [if applicable, indicate subset used]. doi:10.26008/1912/bco-dmo.826281.1 [access date]
Hood Canal CTD profiles of temperature, oxygen, salinity, density, fluorescence, PAR, and pH collected in 2017-2018 Dataset Description: <p>CTD profiles of temperature, oxygen, salinity, density, fluorescence, PAR, and pH collected in Hood Canal on cruises&nbsp;CB1072, CB1077, and RC008 during 2017 and 2018.</p> Methods and Sampling: <p>CTD data were collected from near surface to 5-10 m off the seafloor. Winkler titrations were used to calculate a calibration for oxygen data (equation provided, but not applied to this dataset).</p>
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1657992 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1657992
completed
Julie E. Keister
University of Washington
206-543-7620
School of Oceanography Box 357940
Seattle
WA
98195
United States
jkeister@uw.edu
pointOfContact
Daniel Grunbaum
University of Washington
206-221-6594
School of Oceanography Box 357940
Seattle
WA
98195
USA
random@uw.edu
pointOfContact
asNeeded
Dataset Version: 1
Unknown
year_month
cruise
file_name
Density
Depth
Fluorescence
Latitude
Longitude
Oxygen_raw
Oxygen_SBE_43
Oxygen_saturation_Garcia_Gordon
Oxygen_saturation_Weiss
PAR_Irradiance
pH
Salinity_Practical
Sound_Velocity_Delgrosso
Temperature
Voltage_0
Voltage_1
Voltage_2
Voltage_3
Voltage_4
Voltage_5
Voltage_6
Voltage_7
Descent_Rate
Pressure_Temperature
Pressure_db
Pressure_psi
Sound_Velocity_Chen_Millero
Sound_Velocity_Wilson
Average_Sound_Velocity_Delgrosso
Oxygen_SBE_43_Aligned
Flag
Sea-Bird SBE9 CTD
SBE 18
SBE 43
WETLabs ECO-AFL
theme
None, User defined
date
Cruise identfier
file_name
density
depth
fluorescence
latitude
longitude
Oxygen in volts
dissolved Oxygen
O2 saturation
PAR
pH
salinity
sound velocity
water temperature at measurement depth
No BCO-DMO term
descent_rate
water pressure
quality flag
featureType
BCO-DMO Standard Parameters
CTD Sea-Bird 9
pH Sensor
Sea-Bird SBE 43 Dissolved Oxygen Sensor
Wet Labs ECO-AFL/FL Fluorometer
instrument
BCO-DMO Standard Instruments
CB1077
CB1072
RC008
service
Deployment Activity
Twanoh, Hood Canal, Puget Sound, WA
Hoodsport, Hood Canal, Puget Sound, WA
place
Locations
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
Causes and consequences of hypoxia and pH impacts on zooplankton: Linking movement behavior to vertical distribution.
https://osprey.bco-dmo.org/project/709640
Causes and consequences of hypoxia and pH impacts on zooplankton: Linking movement behavior to vertical distribution.
<p><em>NSF Award Abstract:</em><br />
Low oxygen (hypoxia) and low pH are known to have profound physiological effects on zooplankton, the microscopic animals of the sea. It is likely that many individual zooplankton change vertical mirgration behaviors to reduce or avoid these stresses. However, avoidance responses and their consequences for zooplankton distributions, and for interactions of zooplankton with their predators and prey, are poorly understood. This study will provide information on small-scale behavioral responses of zooplankton to oxygen and pH using video systems deployed in the field in a seasonally hypoxic estuary. The results will deepen our understanding of how zooplankton respond to low oxygen and pH conditions in ways that could profoundly affect marine ecosystems and fisheries through changes in their populations and distributions. This project will train graduate students and will engage K-12 students and teachers in under-served coastal communities by developing ocean technology-based citizen-scientist activities and curricular materials in plankton ecology, ocean change, construction and use of biological sensors, and quantitative analysis of environmental data.</p>
<p>Individual directional motility is a primary mechanism underlying spatio-temporal patterns in zooplankton population distributions. Motility is used by most zooplankton species to select among water column positions that differ in biotic and abiotic variables such as prey, predators, light, oxygen concentration, and pH. Species-specific movement responses to de-oxygenation and acidification are likely mechanisms through which short-term, localized impacts of these stressful conditions on individual zooplankton will be magnified or suppressed as they propagate up to population, community, and ecosystem-level dynamics. This study will quantify responses by key zooplankton species to oxygen and pH using in situ video systems to measure changes in individual behavior in hypoxic, low- pH versus well-oxygenated, high-pH regions of a seasonally hypoxic estuary. Distributions and movements of zooplankton will be quantified using three approaches: 1) an imaging system deployed in situ on a profiling mooring over two summers in a hypoxic region, 2) imagers deployed on Lagrangian drifters to sample simultaneously throughout the water column, and 3) vertically-stratified pumps and net tows to verify species identification and video-based abundance estimates. These field observations will be combined with laboratory analysis of zooplankton movements in oxygen and pH gradients, and with spatially-explicit models to predict how behavioral mechanisms lead to large-scale impacts of environmental stresses.</p>
<p>The following deployments were conducted in 2017 and 2018:<br />
CB1077: <a href="https://www.bco-dmo.org/deployment/735746" target="_blank">https://www.bco-dmo.org/deployment/735746</a><br />
CB1072: <a href="https://www.bco-dmo.org/deployment/735748" target="_blank">https://www.bco-dmo.org/deployment/735748</a><br />
Zoocam_ORCA_Twanoh_2017: <a href="https://www.bco-dmo.org/deployment/735762" target="_blank">https://www.bco-dmo.org/deployment/735762</a><br />
RC0008: <a href="https://www.bco-dmo.org/deployment/775288" target="_blank">https://www.bco-dmo.org/deployment/775288</a><br />
Mooring ORCA_Hoodsport; NANOOS-APL4: <a href="https://www.bco-dmo.org/deployment/775291" target="_blank">https://www.bco-dmo.org/deployment/775291</a></p>
Zooplankton Swimming
largerWorkCitation
project
eng; USA
oceans
Twanoh, Hood Canal, Puget Sound, WA; Hoodsport, Hood Canal, Puget Sound, WA
-123.11
-123.01
47.38
47.42
2017-06-13
2018-09-27
Puget Sound, WA
0
BCO-DMO catalogue of parameters from CTD profiles of temperature, oxygen, salinity, density, fluorescence, PAR, and pH collected in Hood Canal on cruises CB1072, CB1077, and RC008 during 2017 and 2018
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/828440.rdf
Name: year_month
Units: unitless
Description: <p>Year and month (UTC) of cruise</p>
http://lod.bco-dmo.org/id/dataset-parameter/828441.rdf
Name: cruise
Units: unitless
Description: <p>Cruise identifier</p>
http://lod.bco-dmo.org/id/dataset-parameter/828442.rdf
Name: file_name
Units: unitless
Description: <p>Original file name</p>
http://lod.bco-dmo.org/id/dataset-parameter/828443.rdf
Name: Density
Units: kilograms per cubic meter (Kg/m^3)
Description: <p>Density</p>
http://lod.bco-dmo.org/id/dataset-parameter/828444.rdf
Name: Depth
Units: meters (m)
Description: <p>Depth (salt water)</p>
http://lod.bco-dmo.org/id/dataset-parameter/828445.rdf
Name: Fluorescence
Units: milligrams per cubic meter (mg/m^3)
Description: <p>Fluorescence, WET Labs ECO-AFL/FL</p>
http://lod.bco-dmo.org/id/dataset-parameter/828446.rdf
Name: Latitude
Units: degrees North
Description: <p>Latitude</p>
http://lod.bco-dmo.org/id/dataset-parameter/828447.rdf
Name: Longitude
Units: degrees East
Description: <p>Longitude</p>
http://lod.bco-dmo.org/id/dataset-parameter/828448.rdf
Name: Oxygen_raw
Units: volts (V)
Description: <p>Oxygen raw, SBE 43</p>
http://lod.bco-dmo.org/id/dataset-parameter/828449.rdf
Name: Oxygen_SBE_43
Units: milligrams per liter (mg/l)
Description: <p>Oxygen, SBE 43</p>
http://lod.bco-dmo.org/id/dataset-parameter/828450.rdf
Name: Oxygen_saturation_Garcia_Gordon
Units: milligrams per liter (mg/l)
Description: <p>Oxygen saturation, Garcia & Gordon</p>
http://lod.bco-dmo.org/id/dataset-parameter/828451.rdf
Name: Oxygen_saturation_Weiss
Units: milligrams per liter (mg/l)
Description: <p>Oxygen saturation, Weiss</p>
http://lod.bco-dmo.org/id/dataset-parameter/828452.rdf
Name: PAR_Irradiance
Units: micromoles photons per square meter per second (umol photons/m^2/s^1)
Description: <p>PAR/ Irradiance, Biospherical/Licor</p>
http://lod.bco-dmo.org/id/dataset-parameter/828453.rdf
Name: pH
Units: unitless
Description: <p>pH</p>
http://lod.bco-dmo.org/id/dataset-parameter/828454.rdf
Name: Salinity_Practical
Units: PSU
Description: <p>Salinity, Practical</p>
http://lod.bco-dmo.org/id/dataset-parameter/828455.rdf
Name: Sound_Velocity_Delgrosso
Units: meters per second (m/s)
Description: <p>Sound Velocity (Delgrosso)</p>
http://lod.bco-dmo.org/id/dataset-parameter/828456.rdf
Name: Temperature
Units: degrees Celsius
Description: <p>Temperature (ITS-9)</p>
http://lod.bco-dmo.org/id/dataset-parameter/828457.rdf
Name: Voltage_0
Units: volts (V)
Description: <p>Voltage 0</p>
http://lod.bco-dmo.org/id/dataset-parameter/828458.rdf
Name: Voltage_1
Units: volts (V)
Description: <p>Voltage 1</p>
http://lod.bco-dmo.org/id/dataset-parameter/828459.rdf
Name: Voltage_2
Units: volts (V)
Description: <p>Voltage 2</p>
http://lod.bco-dmo.org/id/dataset-parameter/828460.rdf
Name: Voltage_3
Units: volts (V)
Description: <p>Voltage 3</p>
http://lod.bco-dmo.org/id/dataset-parameter/828461.rdf
Name: Voltage_4
Units: volts (V)
Description: <p>Voltage 4</p>
http://lod.bco-dmo.org/id/dataset-parameter/828462.rdf
Name: Voltage_5
Units: volts (V)
Description: <p>Voltage 5</p>
http://lod.bco-dmo.org/id/dataset-parameter/828463.rdf
Name: Voltage_6
Units: volts (V)
Description: <p>Voltage 6</p>
http://lod.bco-dmo.org/id/dataset-parameter/828464.rdf
Name: Voltage_7
Units: volts (V)
Description: <p>Voltage 7</p>
http://lod.bco-dmo.org/id/dataset-parameter/828465.rdf
Name: Descent_Rate
Units: meters per second (m/s)
Description: <p>Descent Rate</p>
http://lod.bco-dmo.org/id/dataset-parameter/828466.rdf
Name: Pressure_Temperature
Units: degrees Celsius
Description: <p>Pressure Temperature</p>
http://lod.bco-dmo.org/id/dataset-parameter/828467.rdf
Name: Pressure_db
Units: decibars (db)
Description: <p>Pressure, Digiquartz</p>
http://lod.bco-dmo.org/id/dataset-parameter/828468.rdf
Name: Pressure_psi
Units: psi
Description: <p>Pressure, Digiquartz</p>
http://lod.bco-dmo.org/id/dataset-parameter/828469.rdf
Name: Sound_Velocity_Chen_Millero
Units: meters per second (m/s)
Description: <p>Sound Velocity (Chen-Millero)</p>
http://lod.bco-dmo.org/id/dataset-parameter/828470.rdf
Name: Sound_Velocity_Wilson
Units: meters per second (m/s)
Description: <p>Sound Velocity (Wilson)</p>
http://lod.bco-dmo.org/id/dataset-parameter/828471.rdf
Name: Average_Sound_Velocity_Delgrosso
Units: meters per second (m/s)
Description: <p>Average Sound Velocity (Delgrosso)</p>
http://lod.bco-dmo.org/id/dataset-parameter/828472.rdf
Name: Oxygen_SBE_43_Aligned
Units: milligrams per liter (mg/l)
Description: <p>Oxygen, SBE 43, offset corrected</p>
http://lod.bco-dmo.org/id/dataset-parameter/828473.rdf
Name: Flag
Units: unitless
Description: <p>flag</p>
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
497566
https://darchive.mblwhoilibrary.org/bitstream/1912/26370/1/dataset-826281_hood-canal-ctd__v1.tsv
download
https://doi.org/10.26008/1912/bco-dmo.826281.1
download
onLine
dataset
<p>CTD data were collected from near surface to 5-10 m off the seafloor. Winkler titrations were used to calculate a calibration for oxygen data (equation provided, but not applied to this dataset).</p>
Specified by the Principal Investigator(s)
<p>CTD data from near surface to 5-10 m off the seafloor were processed using Sea Bird software to create 1-m data bins. Oxygen was aligned. Dates and times are in local time, PDT.</p>
<p>Based on modified Winkler titrations, the formula y = 0.9144x + 0.1975 can be applied to the CTD data to calibrate the "Oxygen, SBE 43 (mg/l)" for the 2017 cruises. The formula y = 0.9698x + 0.0691 can be applied for the 2018 cruises.</p>
<p><strong>BCO-DMO Processing:</strong><br />
- concatenated data from separate cruises into one dataset;<br />
- renamed fields.</p>
Specified by the Principal Investigator(s)
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
Sea-Bird SBE9 CTD
Sea-Bird SBE9 CTD
PI Supplied Instrument Name: Sea-Bird SBE9 CTD PI Supplied Instrument Description:Sea-Bird SBE9 CTD profiler equipped with a pH sensor (SBE 18), oxygen sensor (SBE 43), fluorometer (WETLabs ECO-AFL), and Niskin bottles. Instrument Name: CTD Sea-Bird 9 Instrument Short Name:CTD SBE 9 Instrument Description: The Sea-Bird SBE 9 is a type of CTD instrument package. The SBE 9 is the Underwater Unit and is most often combined with the SBE 11 Deck Unit (for real-time readout using conductive wire) when deployed from a research vessel. The combination of the SBE 9 and SBE 11 is called a SBE 911. The SBE 9 uses Sea-Bird's standard modular temperature and conductivity sensors (SBE 3 and SBE 4). The SBE 9 CTD can be configured with auxiliary sensors to measure other parameters including dissolved oxygen, pH, turbidity, fluorometer, altimeter, etc.). Note that in most cases, it is more accurate to specify SBE 911 than SBE 9 since it is likely a SBE 11 deck unit was used. more information from Sea-Bird Electronics Community Standard Description: http://vocab.nerc.ac.uk/collection/L05/current/130/
SBE 18
SBE 18
PI Supplied Instrument Name: SBE 18 PI Supplied Instrument Description:Sea-Bird SBE9 CTD profiler equipped with a pH sensor (SBE 18), oxygen sensor (SBE 43), fluorometer (WETLabs ECO-AFL), and Niskin bottles. Instrument Name: pH Sensor Instrument Short Name:pH Sensor Instrument Description: An instrument that measures the hydrogen ion activity in solutions.
The overall concentration of hydrogen ions is inversely related to its pH. The pH scale ranges from 0 to 14 and indicates whether acidic (more H+) or basic (less H+).
SBE 43
SBE 43
PI Supplied Instrument Name: SBE 43 PI Supplied Instrument Description:Sea-Bird SBE9 CTD profiler equipped with a pH sensor (SBE 18), oxygen sensor (SBE 43), fluorometer (WETLabs ECO-AFL), and Niskin bottles. Instrument Name: Sea-Bird SBE 43 Dissolved Oxygen Sensor Instrument Short Name:SBE-43 DO Instrument Description: The Sea-Bird SBE 43 dissolved oxygen sensor is a redesign of the Clark polarographic membrane type of dissolved oxygen sensors. more information from Sea-Bird Electronics Community Standard Description: http://vocab.nerc.ac.uk/collection/L22/current/TOOL0036/
WETLabs ECO-AFL
WETLabs ECO-AFL
PI Supplied Instrument Name: WETLabs ECO-AFL PI Supplied Instrument Description:Sea-Bird SBE9 CTD profiler equipped with a pH sensor (SBE 18), oxygen sensor (SBE 43), fluorometer (WETLabs ECO-AFL), and Niskin bottles. Instrument Name: Wet Labs ECO-AFL/FL Fluorometer Instrument Short Name:ECO AFL/FL Instrument Description: The Environmental Characterization Optics (ECO) series of single channel fluorometers delivers both high resolution and wide ranges across the entire line of parameters using 14 bit digital processing. The ECO series excels in biological monitoring and dye trace studies. The potted optics block results in long term stability of the instrument and the optional anti-biofouling technology delivers truly long term field measurements.
more information from Wet Labs Community Standard Description: http://vocab.nerc.ac.uk/collection/L22/current/TOOL0172/
Cruise: CB1077
CB1077
R/V Clifford A. Barnes
Community Standard Description
International Council for the Exploration of the Sea
R/V Clifford A. Barnes
vessel
CB1077
Julie E. Keister
University of Washington
Cruise: CB1072
CB1072
R/V Clifford A. Barnes
Community Standard Description
International Council for the Exploration of the Sea
R/V Clifford A. Barnes
vessel
CB1072
Julie E. Keister
University of Washington
Cruise: RC008
RC008
R/V Rachel Carson (UW)
Community Standard Description
International Council for the Exploration of the Sea
R/V Rachel Carson (UW)
vessel
RC008
Julie E. Keister
University of Washington
https://datadocs.bco-dmo.org/docs/Zooplankton_Swimming/data_docs/RC008_cruise_plan.pdf
Report describing RC008
R/V Clifford A. Barnes
Community Standard Description
International Council for the Exploration of the Sea
R/V Clifford A. Barnes
vessel
R/V Rachel Carson (UW)
Community Standard Description
International Council for the Exploration of the Sea
R/V Rachel Carson (UW)
vessel