http://lod.bco-dmo.org/id/dataset/829895
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2020-11-19
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
Depth profile data from R/V New Horizons NH1418 in the tropical Pacific from Sept-Oct. 2014
2020-11-19
publication
2020-11-19
revision
Marine Biological Laboratory/Woods Hole Oceanographic Institution Library (MBLWHOI DLA)
2020-11-20
publication
https://doi.org/10.26008/1912/bco-dmo.829895.1
Michael W. Lomas
Bigelow Laboratory for Ocean Sciences
principalInvestigator
Adam Martiny
University of California-Irvine
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Lomas, M. W., Martiny, A. (2020) Depth profile data from R/V New Horizons NH1418 in the tropical Pacific from Sept-Oct. 2014. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2020-11-19 [if applicable, indicate subset used]. doi:10.26008/1912/bco-dmo.829895.1 [access date]
NH1418 ctd Dataset Description: Methods and Sampling: <p>Temperature, salinity, oxygen concentration and saturation, and PAR were measured using a Sea-Bird SBE-911+ CTD platform equipped on the rosette deployment system. Fluorescence was measured via the rosette system using a WetLabs ECO AFL/FL platform.</p>
<p>Samples for NO3-/NO2- and NO2- were gravity filtered through 0.8 µm Nucleopore polycarbonate filters using acid cleaned in-line polycarbonate filter holders, then frozen (-20oC) in HDPE bottles until analysis on an Alpkem Flow Solution IV (Dore et al. 1996).</p>
<p>Soluble reactive phosphorus was measured after preparation via the magnesium-induced coprecipitation method (Karl and Tien 1992; Lomas et al. 2010).</p>
<p>Particulate organic carbon (POC), nitrogen (PON), and phosphorus samples were filtered on precombusted Whatman GF/F filters and frozen until analysis. After thawing, POC/PON filters were allowed to dry overnight at 65◦C before being packed into a 30 mm tin capsule (CE Elantech, Lakewood, New Jersey). Samples were then analyzed for C and N content on a FlashEA 1112 nitrogen and carbon analyzer (Thermo Scientific, Waltham, Massachusetts). POC and PON concentrations were calibrated using known quantities of atropine. &nbsp;Particulate organic phosphorus samples (POP) are analyzed using a ash-hydrolysis method (Lomas et al., 2010)</p>
<p>For chlorophyll, ~ 250–500 mL seawater was filtered onto 25-mm Ahlstrom glass fiber filters (nominal pore size 0.7 μm) under low pressure (15 kpa), and frozen immediately at −80_C. Samples were extracted in 90% acetone in the dark for 14–18 h at −20_C and quantified on a Turner 10-AU fluorometer using the acidification method (Parsons et al. 1984).</p>
<p>For cell counts, samples of whole seawater were collected in 2-mL centrifuge tubes, fixed with freshly made 0.2 -μm-filtered paraformaldehyde (0.5% v/v final concentration) for 1 h at 5_C in the dark, and counted on a FACSJazz or Influx flow cytometer (BD, Franklin Lakes, NJ, U.S.A.) utilizing a 200 mW 488 nm laser, with detectors for forward scatter, side scatter, 530 nm, and 692 nm. Prochlorococcus populations were discriminated based on forward scatter and red fluorescence, and a gate in orange (585 nm) discriminated for Synechococcus. Picoeukaryotic phytoplankton were all the red auto fluorescing cells that did not fit the Cyanobacteria gating scheme with a cell size below 2 – 3 μm.</p>
<p>See https://www.rvdata.us/search/cruise/NH1418 for further details.</p>
<p>For published methodologies please see the&nbsp;Related Publications&nbsp;section.</p>
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1046001 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1046001
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1046368 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1046368
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1046297 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1046297
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1045966 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1045966
completed
Michael W. Lomas
Bigelow Laboratory for Ocean Sciences
207-315-2567 ext 311
60 Bigelow Drive PO Box 380
East Boothbay
ME
04544
United States
mlomas@bigelow.org
pointOfContact
Adam Martiny
University of California-Irvine
949-824-9713
Earth System Science & Ecology and Evolutionary Biology 3208 Croul Hall
Irvine
CA
92697
USA
amartiny@uci.edu
pointOfContact
asNeeded
Dataset Version: 1
Unknown
Cruise
ISO_DateTime_UTC
yrday_utc
Station
Cast
Latitude
Longitude
Depth
Temperature
Salinity
Oxygen_Concentration
Oxygen_Saturation
Density
Chla
CTD_PAR
CTD_Fluorescence
Nitrate_Nitrite
Nitrite
SRP
POC
PON
POP
Prochlorococcus
Synechococcus
Picoeukaryotes
Nanoeukaryotes
Prochlorococcus_POC_cell
Synechococcus_POC_cell
Picoeukaryotes_POC_cell
Nanoeukaryotes_POC_cell
DNA_Cast
DNA_ISO_DateTime_UTC
DNA_Depth
DNA_Niskin_Bottle
DNA_Sample
FACSJazz: Fluorescence Activated Cell Sorter (BD Biosciences)
FlashEA 112
Sea-Bird SBE-911+
Influx Flow Cytometer
theme
None, User defined
Cruise identfier
ISO_DateTime_UTC
UTC day of year and decimal time
station
cast
latitude
longitude
depth
water temperature at measurement depth
salinity
dissolved Oxygen
density
chlorophyll a
PAR
fluorescence
nitrate plus nitrite
Nitrate
SRP
particulate organic Carbon (POC)
particulate organic nitrogen
particulate organic phosphorus
prochlorococcus abundance
synechococcus abundance from flow cytometry
pico_euks
cell_concentration
bottle
sample identification
featureType
BCO-DMO Standard Parameters
Automated Cell Counter
CHN Elemental Analyzer
CTD Sea-Bird SBE 911plus
Flow Cytometer
Niskin bottle
Turner Designs Fluorometer 10-AU
WETLabs ECO-FLNTU
instrument
BCO-DMO Standard Instruments
NH1418
service
Deployment Activity
Hawaii
place
Locations
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
Dimensions of Biodiversity
http://www.nsf.gov/funding/pgm_summ.jsp?pims_id=503446
Dimensions of Biodiversity
(adapted from the NSF Synopsis of Program)
Dimensions of Biodiversity is a program solicitation from the NSF Directorate for Biological Sciences. FY 2010 was year one of the program. [MORE from NSF]
The NSF Dimensions of Biodiversity program seeks to characterize biodiversity on Earth by using integrative, innovative approaches to fill rapidly the most substantial gaps in our understanding. The program will take a broad view of biodiversity, and in its initial phase will focus on the integration of genetic, taxonomic, and functional dimensions of biodiversity. Project investigators are encouraged to integrate these three dimensions to understand the interactions and feedbacks among them. While this focus complements several core NSF programs, it differs by requiring that multiple dimensions of biodiversity be addressed simultaneously, to understand the roles of biodiversity in critical ecological and evolutionary processes.
Dimensions of Biodiversity
largerWorkCitation
program
Ocean Carbon and Biogeochemistry
http://us-ocb.org/
Ocean Carbon and Biogeochemistry
The Ocean Carbon and Biogeochemistry (OCB) program focuses on the ocean's role as a component of the global Earth system, bringing together research in geochemistry, ocean physics, and ecology that inform on and advance our understanding of ocean biogeochemistry. The overall program goals are to promote, plan, and coordinate collaborative, multidisciplinary research opportunities within the U.S. research community and with international partners. Important OCB-related activities currently include: the Ocean Carbon and Climate Change (OCCC) and the North American Carbon Program (NACP); U.S. contributions to IMBER, SOLAS, CARBOOCEAN; and numerous U.S. single-investigator and medium-size research projects funded by U.S. federal agencies including NASA, NOAA, and NSF.
The scientific mission of OCB is to study the evolving role of the ocean in the global carbon cycle, in the face of environmental variability and change through studies of marine biogeochemical cycles and associated ecosystems.
The overarching OCB science themes include improved understanding and prediction of: 1) oceanic uptake and release of atmospheric CO2 and other greenhouse gases and 2) environmental sensitivities of biogeochemical cycles, marine ecosystems, and interactions between the two.
The OCB Research Priorities (updated January 2012) include: ocean acidification; terrestrial/coastal carbon fluxes and exchanges; climate sensitivities of and change in ecosystem structure and associated impacts on biogeochemical cycles; mesopelagic ecological and biogeochemical interactions; benthic-pelagic feedbacks on biogeochemical cycles; ocean carbon uptake and storage; and expanding low-oxygen conditions in the coastal and open oceans.
OCB
largerWorkCitation
program
Biological Controls on the Ocean C:N:P ratios
https://osprey.bco-dmo.org/project/2178
Biological Controls on the Ocean C:N:P ratios
<p>One of the fundamental patterns of ocean biogeochemistry is the Redfield ratio, linking the stoichiometry of surface plankton with the chemistry of the deep ocean. There is no obvious mechanism for the globally consistent C:N:P ratio of 106:16:1 (Redfield ratio), especially as there is substantial elemental variation among plankton communities in different ocean regions. Thus, knowing how biodiversity regulates the elemental composition of the ocean is important for understanding the ocean and climate as a whole -- now and in the future.</p>
<p>The conceptual hypotheses for this study are as follows: 1. The C:N:P ratio of a cell is constrained by its broad taxonomic group, which determines, for example, whether it has an outer shell, its size, functional metabolism, membrane lipid composition. 2. Within a taxon, there is high genetic diversity. Some of this genetic diversity is potentially laterally transferred, or can be lost within taxa, and confers various functional abilities (organic phosphate assimilation, nitrate assimilation, photoheterotrophy, etc.). Functional diversity provides the cell with further flexibility, such as the ability to respond to varying nutrient supply rates/ratios, and affects a cell's C:N:P ratio within the range specified by the taxon. 3. Given these taxonomic and genetic constraints, a cell is physiologically plastic and modifies how it allocates cellular resources in response to nutrient supply rates/ratios in the environment. 4. The microbial diversity (taxonomic, genetic, and functional) of the surface ocean varies over time and space, driven by many factors in addition to nutrients. The sum of this mixture composes the ecosystem C:N:P, the ratio that Redfield described.</p>
<p>Based on this framework, the CoPIs will make field observations of taxon-specific stoichiometry and growth rates, genomic analyses, and conduct laboratory chemostat experiments to improve understanding of how ocean taxonomic, genetic, and functional biodiversity control the stoichiometry of the surface ocean plankton. Their analyses of these data would lead to a mechanistic understanding of variations in the Redfield ratio, both spatially and temporally.</p>
<p>This study will greatly expand knowledge of the genomic diversity among ocean microbes and how this diversity affects biogeochemistry. The stoichiometry of the ocean's microbes is a parameter that nearly every chemical or biological oceanographer uses, from converting measurements made in one element to another, to estimating regional and global nitrogen budgets. The research also has important implications for the global carbon budget and any changes that might result from climate change.</p>
<p>To understand mechanistically temporal and spatial variability of the plankton C:N:P ratio, biodiversity must be studied not only at the traditional taxonomic level, but at the genetic and functional levels which dictate organism response to their environment. Data will be integrated into a combined ocean ecological, evolutionary, and biogeochemical model, with flexible stoichiometry, including cellular biochemical allocations. Seeding a coupled physical-biological model of the oceans with multiple competing genotypes enables the exploration of ecological and evolutionary patterns of resource acquisition and C:N:P ratios. Developing a more mechanistic examination of the course of ecology and evolution, in which laboratory and field data define tradeoffs between different growth and nutrient acquisition strategies, would estabblish the framework of adaptive dynamics for determining "evolutionarily convergence". Finally, model outcomes will be evaluated against field data.</p>
<p>The field work planned for this project includes several cruises: BV46 (September/October 2011), BV48 (September 2012), a June 2013 cruise from Bermuda to the Labrador Sea, and a cruise from Hawaii to Tahiti (May 2014). Additionally, samples will be be acquired during cruises of opportunity.</p>
Biological C:N:P ratios
largerWorkCitation
project
eng; USA
biota
oceans
Hawaii
-158
-149.67
-3.0001
19.001
2014-09-20
2014-10-06
western North Atlantic; 60N to 20N along 66W longitude; 20N to 15S in the tropical Pacific
0
BCO-DMO catalogue of parameters from Depth profile data from R/V New Horizons NH1418 in the tropical Pacific from Sept-Oct. 2014
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/831004.rdf
Name: Cruise
Units: unitless
Description: <p>Cruise ID</p>
http://lod.bco-dmo.org/id/dataset-parameter/831005.rdf
Name: ISO_DateTime_UTC
Units: unitless
Description: <p>Date/Time (UTC) ISO formatted yyyy-mm-ddTHH:MMZ</p>
http://lod.bco-dmo.org/id/dataset-parameter/831006.rdf
Name: yrday_utc
Units: unitless
Description: <p>UTC day and decimal time: 326.5 for the 326th day of the year or November 22 at 1200 hours (noon)</p>
http://lod.bco-dmo.org/id/dataset-parameter/831007.rdf
Name: Station
Units: unitless
Description: <p>Station ID number</p>
http://lod.bco-dmo.org/id/dataset-parameter/831008.rdf
Name: Cast
Units: unitless
Description: <p>Cast number</p>
http://lod.bco-dmo.org/id/dataset-parameter/831009.rdf
Name: Latitude
Units: decimal degrees
Description: <p>Sampling Site Latitude (North is positive)</p>
http://lod.bco-dmo.org/id/dataset-parameter/831010.rdf
Name: Longitude
Units: decimal degrees
Description: <p>Sampling Site Longitude (West is negative)</p>
http://lod.bco-dmo.org/id/dataset-parameter/831011.rdf
Name: Depth
Units: meters
Description: <p>Water sample depth</p>
http://lod.bco-dmo.org/id/dataset-parameter/831012.rdf
Name: Temperature
Units: degrees Celsius
Description: <p>Temperature</p>
http://lod.bco-dmo.org/id/dataset-parameter/831013.rdf
Name: Salinity
Units: Practical Salinity Units (PSU)
Description: <p>Salinity</p>
http://lod.bco-dmo.org/id/dataset-parameter/831014.rdf
Name: Oxygen_Concentration
Units: micromol/kilogram (umol/kg)
Description: <p>Oxygen concentration</p>
http://lod.bco-dmo.org/id/dataset-parameter/831015.rdf
Name: Oxygen_Saturation
Units: percent
Description: <p>Oxygen saturation</p>
http://lod.bco-dmo.org/id/dataset-parameter/831016.rdf
Name: Density
Units: kilograms/meter^2 (kg/m^2)
Description: <p>Water density</p>
http://lod.bco-dmo.org/id/dataset-parameter/831017.rdf
Name: Chla
Units: micrograms/liter (ug/L)
Description: <p>Chlorophyll a concentration</p>
http://lod.bco-dmo.org/id/dataset-parameter/831018.rdf
Name: CTD_PAR
Units: micromol/meter^2/second (umol/m^2/s)
Description: <p>Photosynthetically active radiation; measured off a CTD platform</p>
http://lod.bco-dmo.org/id/dataset-parameter/831019.rdf
Name: CTD_Fluorescence
Units: milligrams/meter^3 (mg/m^3)
Description: <p>Fluorescence; measured off a CTD platform</p>
http://lod.bco-dmo.org/id/dataset-parameter/831020.rdf
Name: Nitrate_Nitrite
Units: microMolar (uM)
Description: <p>Nitrate + Nitrite</p>
http://lod.bco-dmo.org/id/dataset-parameter/831021.rdf
Name: Nitrite
Units: microMolar (uM)
Description: <p>Nitrite</p>
http://lod.bco-dmo.org/id/dataset-parameter/831022.rdf
Name: SRP
Units: microMolar (uM)
Description: <p>Soluble reactive phosphate</p>
http://lod.bco-dmo.org/id/dataset-parameter/831023.rdf
Name: POC
Units: microMolar (uM)
Description: <p>Particulate organic carbon</p>
http://lod.bco-dmo.org/id/dataset-parameter/831024.rdf
Name: PON
Units: microMolar (uM)
Description: <p>Particulate organic nitrogen</p>
http://lod.bco-dmo.org/id/dataset-parameter/831025.rdf
Name: POP
Units: microMolar (uM)
Description: <p>Particulate organic phosphorus</p>
http://lod.bco-dmo.org/id/dataset-parameter/831026.rdf
Name: Prochlorococcus
Units: cells/milliliter
Description: <p>Prochlorococcus concentration</p>
http://lod.bco-dmo.org/id/dataset-parameter/831027.rdf
Name: Synechococcus
Units: cells/milliliter
Description: <p>Synechococcus concentration</p>
http://lod.bco-dmo.org/id/dataset-parameter/831028.rdf
Name: Picoeukaryotes
Units: cells/milliliter
Description: <p>Picoeukaryote concentration</p>
http://lod.bco-dmo.org/id/dataset-parameter/831029.rdf
Name: Nanoeukaryotes
Units: cells/milliliter
Description: <p>Nanoeukaryote concentration</p>
http://lod.bco-dmo.org/id/dataset-parameter/831030.rdf
Name: Prochlorococcus_POC_cell
Units: femtograms/cell (fg/cell)
Description: <p>Prochlorococcus particulate organic carbon per cell</p>
http://lod.bco-dmo.org/id/dataset-parameter/831031.rdf
Name: Synechococcus_POC_cell
Units: femtograms/cell (fg/cell)
Description: <p>Synechococcus particulate organic carbon per cell</p>
http://lod.bco-dmo.org/id/dataset-parameter/831032.rdf
Name: Picoeukaryotes_POC_cell
Units: femtograms/cell (fg/cell)
Description: <p>Picoeukaryote particulate organic carbon per cell</p>
http://lod.bco-dmo.org/id/dataset-parameter/831033.rdf
Name: Nanoeukaryotes_POC_cell
Units: femtograms/cell (fg/cell)
Description: <p>Nanoeukaryote particulate organic carbon per cell</p>
http://lod.bco-dmo.org/id/dataset-parameter/831034.rdf
Name: DNA_Cast
Units: unitless
Description: <p>Cast number for DNA samples</p>
http://lod.bco-dmo.org/id/dataset-parameter/831035.rdf
Name: DNA_ISO_DateTime_UTC
Units: unitless
Description: <p>Time of DNA cast</p>
http://lod.bco-dmo.org/id/dataset-parameter/831036.rdf
Name: DNA_Depth
Units: meters
Description: <p>Depth of DNA sample collection</p>
http://lod.bco-dmo.org/id/dataset-parameter/831037.rdf
Name: DNA_Niskin_Bottle
Units: unitless
Description: <p>DNA sample bottle</p>
http://lod.bco-dmo.org/id/dataset-parameter/831038.rdf
Name: DNA_Sample
Units: unitless
Description: <p>DNA sample ID</p>
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
40836
https://darchive.mblwhoilibrary.org/bitstream/1912/26394/1/dataset-829895_nh1418-ctd-profiles__v1.tsv
download
https://doi.org/10.26008/1912/bco-dmo.829895.1
download
onLine
dataset
<p>Temperature, salinity, oxygen concentration and saturation, and PAR were measured using a Sea-Bird SBE-911+ CTD platform equipped on the rosette deployment system. Fluorescence was measured via the rosette system using a WetLabs ECO AFL/FL platform.</p>
<p>Samples for NO3-/NO2- and NO2- were gravity filtered through 0.8 µm Nucleopore polycarbonate filters using acid cleaned in-line polycarbonate filter holders, then frozen (-20oC) in HDPE bottles until analysis on an Alpkem Flow Solution IV (Dore et al. 1996).</p>
<p>Soluble reactive phosphorus was measured after preparation via the magnesium-induced coprecipitation method (Karl and Tien 1992; Lomas et al. 2010).</p>
<p>Particulate organic carbon (POC), nitrogen (PON), and phosphorus samples were filtered on precombusted Whatman GF/F filters and frozen until analysis. After thawing, POC/PON filters were allowed to dry overnight at 65◦C before being packed into a 30 mm tin capsule (CE Elantech, Lakewood, New Jersey). Samples were then analyzed for C and N content on a FlashEA 1112 nitrogen and carbon analyzer (Thermo Scientific, Waltham, Massachusetts). POC and PON concentrations were calibrated using known quantities of atropine. &nbsp;Particulate organic phosphorus samples (POP) are analyzed using a ash-hydrolysis method (Lomas et al., 2010)</p>
<p>For chlorophyll, ~ 250–500 mL seawater was filtered onto 25-mm Ahlstrom glass fiber filters (nominal pore size 0.7 μm) under low pressure (15 kpa), and frozen immediately at −80_C. Samples were extracted in 90% acetone in the dark for 14–18 h at −20_C and quantified on a Turner 10-AU fluorometer using the acidification method (Parsons et al. 1984).</p>
<p>For cell counts, samples of whole seawater were collected in 2-mL centrifuge tubes, fixed with freshly made 0.2 -μm-filtered paraformaldehyde (0.5% v/v final concentration) for 1 h at 5_C in the dark, and counted on a FACSJazz or Influx flow cytometer (BD, Franklin Lakes, NJ, U.S.A.) utilizing a 200 mW 488 nm laser, with detectors for forward scatter, side scatter, 530 nm, and 692 nm. Prochlorococcus populations were discriminated based on forward scatter and red fluorescence, and a gate in orange (585 nm) discriminated for Synechococcus. Picoeukaryotic phytoplankton were all the red auto fluorescing cells that did not fit the Cyanobacteria gating scheme with a cell size below 2 – 3 μm.</p>
<p>See https://www.rvdata.us/search/cruise/NH1418 for further details.</p>
<p>For published methodologies please see the&nbsp;Related Publications&nbsp;section.</p>
Specified by the Principal Investigator(s)
<p><strong>BCO-DMO Processing:</strong><br />
- data submitted in Excel file "NH1418_BCODMO.xlsx" sheet "SHEET1" extracted to csv<br />
- added conventional header with dataset name, PI name, version date<br />
- renamed columns to conform with BCO-DMO naming conventions (removed spaces)</p>
Specified by the Principal Investigator(s)
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
FACSJazz: Fluorescence Activated Cell Sorter (BD Biosciences)
FACSJazz: Fluorescence Activated Cell Sorter (BD Biosciences)
PI Supplied Instrument Name: FACSJazz: Fluorescence Activated Cell Sorter (BD Biosciences) PI Supplied Instrument Description:Used to count cells Instrument Name: Automated Cell Counter Instrument Short Name:ACC Instrument Description: An instrument that determines the numbers, types or viability of cells present in a sample.
FlashEA 112
FlashEA 112
PI Supplied Instrument Name: FlashEA 112 PI Supplied Instrument Description:Used for carbon and nitrogen measurements Instrument Name: CHN Elemental Analyzer Instrument Short Name:CHN_EA Instrument Description: A CHN Elemental Analyzer is used for the determination of carbon, hydrogen, and nitrogen content in organic and other types of materials, including solids, liquids, volatile, and viscous samples.
Sea-Bird SBE-911+
Sea-Bird SBE-911+
PI Supplied Instrument Name: Sea-Bird SBE-911+ Instrument Name: CTD Sea-Bird SBE 911plus Instrument Short Name:CTD SBE 911plus Instrument Description: The Sea-Bird SBE 911 plus is a type of CTD instrument package for continuous measurement of conductivity, temperature and pressure. The SBE 911 plus includes the SBE 9plus Underwater Unit and the SBE 11plus Deck Unit (for real-time readout using conductive wire) for deployment from a vessel. The combination of the SBE 9 plus and SBE 11 plus is called a SBE 911 plus. The SBE 9 plus uses Sea-Bird's standard modular temperature and conductivity sensors (SBE 3 plus and SBE 4). The SBE 9 plus CTD can be configured with up to eight auxiliary sensors to measure other parameters including dissolved oxygen, pH, turbidity, fluorescence, light (PAR), light transmission, etc.). more information from Sea-Bird Electronics Community Standard Description: http://vocab.nerc.ac.uk/collection/L22/current/TOOL0058/
Influx Flow Cytometer
Influx Flow Cytometer
PI Supplied Instrument Name: Influx Flow Cytometer PI Supplied Instrument Description:Used for cell counts Instrument Name: Flow Cytometer Instrument Short Name:Flow Cytometer Instrument Description: Flow cytometers (FC or FCM) are automated instruments that quantitate properties of single cells, one cell at a time. They can measure cell size, cell granularity, the amounts of cell components such as total DNA, newly synthesized DNA, gene expression as the amount messenger RNA for a particular gene, amounts of specific surface receptors, amounts of intracellular proteins, or transient signalling events in living cells.
(from: http://www.bio.umass.edu/micro/immunology/facs542/facswhat.htm) Community Standard Description: http://vocab.nerc.ac.uk/collection/L05/current/LAB37/
PI Supplied Instrument Name: Instrument Name: Niskin bottle Instrument Short Name:Niskin bottle Instrument Description: A Niskin bottle (a next generation water sampler based on the Nansen bottle) is a cylindrical, non-metallic water collection device with stoppers at both ends. The bottles can be attached individually on a hydrowire or deployed in 12, 24, or 36 bottle Rosette systems mounted on a frame and combined with a CTD. Niskin bottles are used to collect discrete water samples for a range of measurements including pigments, nutrients, plankton, etc. Community Standard Description: http://vocab.nerc.ac.uk/collection/L22/current/TOOL0412/
PI Supplied Instrument Name: Instrument Name: Turner Designs Fluorometer 10-AU Instrument Short Name:Turner Fluorometer 10-AU Instrument Description: The Turner Designs 10-AU Field Fluorometer is used to measure Chlorophyll fluorescence. The 10AU Fluorometer can be set up for continuous-flow monitoring or discrete sample analyses. A variety of compounds can be measured using application-specific optical filters available from the manufacturer (read more from Turner Designs, turnerdesigns.com, Sunnyvale, CA, USA). Community Standard Description: http://vocab.nerc.ac.uk/collection/L22/current/TOOL0393/
PI Supplied Instrument Name: Instrument Name: WETLabs ECO-FLNTU Instrument Short Name:WETLabs ECO-FLNTU Instrument Description: The ECO FLNTU is a dual-wavelength, single-angle sensor for simultaneously determining both chlorophyll fluorescence and turbidity. Community Standard Description: http://vocab.nerc.ac.uk/collection/L22/current/TOOL0215/
Cruise: NH1418
NH1418
R/V New Horizon
Community Standard Description
International Council for the Exploration of the Sea
R/V New Horizon
vessel
NH1418
Michael W. Lomas
Bigelow Laboratory for Ocean Sciences
R/V New Horizon
Community Standard Description
International Council for the Exploration of the Sea
R/V New Horizon
vessel