http://lod.bco-dmo.org/id/dataset/842938
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2021-03-02
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
Water column temperature measurements from 2017-2019 on coral reefs around the island of Mo’orea, French Polynesia
2021-03-02
publication
2021-03-02
revision
Marine Biological Laboratory/Woods Hole Oceanographic Institution Library (MBLWHOI DLA)
2021-07-06
publication
https://doi.org/10.26008/1912/bco-dmo.842938.1
Andrew Thurber
Oregon State University
principalInvestigator
Adrienne M.S. Correa
Rice University
principalInvestigator
Rebecca Vega Thurber
Oregon State University
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Thurber, A., Vega Thurber, R., Correa, A. S. (2021) Water column temperature measurements from 2017-2019 on coral reefs around the island of Mo’orea, French Polynesia. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2021-03-02 [if applicable, indicate subset used]. doi:10.26008/1912/bco-dmo.842938.1 [access date]
Methods and Sampling: <p>Water column temperatures were recorded around the island of Mo’orea, French Polynesia from September 2017 through March 2019.&nbsp; Onset HOBO&nbsp;temperature loggers were deployed by divers&nbsp;at nine sites within three reef zones, and replaced at six month intervals.&nbsp; The average (mean) temperature per hour was calculated and is reported, but no calibration was done for individual sensors.&nbsp;</p>
<p>Reef zones are designated by their location with respect to the reef:&nbsp;&nbsp;<br />
&nbsp; &nbsp;1)&nbsp; Fore = offshore or outside part of reef;&nbsp;<br />
&nbsp; &nbsp;2)&nbsp; Back&nbsp; = inside of the reef crest; or<br />
&nbsp; &nbsp;3)&nbsp; Fringing =&nbsp; adjacent to the shore.&nbsp;&nbsp;</p>
<p>&nbsp;</p>
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1635798 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1635798
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1635913 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1635913
completed
Andrew Thurber
Oregon State University
541-737-4500
athurber@ucsb.edu
pointOfContact
Adrienne M.S. Correa
Rice University
amsc@berkeley.edu
pointOfContact
Rebecca Vega Thurber
Oregon State University
rvegathurber@gmail.com
pointOfContact
asNeeded
Dataset Version: 1
Unknown
ISO_DateTime_UTC
Site
Reef_zone
Latitude
Longitude
Temperature
DateTime_local
HOBO Pendant® Temperature/Light 8K Data Logger Part # UA-002-08
theme
None, User defined
ISO_DateTime_UTC
site
region
latitude
longitude
temperature of sample or a generic measurement (not in-situ water temp)
ISO_DateTime_Local
featureType
BCO-DMO Standard Parameters
Onset HOBO Pendant Temperature/Light Data Logger
instrument
BCO-DMO Standard Instruments
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
Collaborative Research: Viral Reefscapes: The Role of Viruses in Coral Reef Health, Disease, and Biogeochemical Cycling
https://osprey.bco-dmo.org/project/713328
Collaborative Research: Viral Reefscapes: The Role of Viruses in Coral Reef Health, Disease, and Biogeochemical Cycling
<p>Ecologically and economically, coral reefs are among the most valuable ecosystems on Earth. These habitats are estimated to harbor up to nine million species, contribute ~30 billion US dollars annually to the global economy, and are tropical epicenters of biogeochemical cycling. Global (climate change) and local (nutrient pollution and overfishing) stressors are drivers of coral reef decline that can disrupt the symbiotic associations among corals and resident microbial communities, including dinoflagellate algae, bacteria, and viruses. Viruses interact with all living cellular organisms, are abundant in oceans, and integral to marine ecosystem functioning. This project will be the first to quantify the variability of viral infection in corals across different reef habitats and across time. This will increase our understanding of the total diversity of coral viruses and illuminate the full suite of factors that trigger viral outbreaks on reefs. At the same time the project will evaluate how carbon and nitrogen cycling are altered on coral reefs as a result of global and local stressors that trigger viral infection. This project will ultimately broaden our understanding of the impacts of viruses on reefs beyond their role as putative disease agents. Results of the project will be communicated broadly in scientific arenas, in K-12, undergraduate, and graduate education and training programs, and to the general public through video and multimedia productions, as well as outreach events. 2-D Reef Replicas from our field sites across Moorea will be constructed, allowing children and adults in the US and French Polynesia to 'become' marine scientists and use quadrats, transect tapes, and identification guides to quantify metrics of reef change. Three graduate students will be involved in all aspects of the research and an effort will be made to recruit and support minority students. All datasets will be made freely available to the public and newly developed methods from this project will serve as an important set of springboard tools and baselines for future lines of inquiry into the processes that influence reef health.</p>
<p>Coral reefs, found in nutrient-poor shallow waters, are biodiversity and productivity hotspots that provide substantial ecological and societal benefits. Corals energetically subsidize these oligotrophic ecosystems by releasing significant amounts of mucus (an organic carbon and nitrogen-rich matrix) into the surrounding seawater. Viral production in reef waters can be a significant portion of total reef carbon cycling, accounting for ~10% of gross benthic carbon fixation in reef ecosystems. Viruses are also ~10 times more abundant on coral surfaces than in the water column meaning that viral infection experienced by corals during stress likely results is an increase in carbon and perhaps nitrogen flux to the water column. Thus phages and eukaryotic viruses may be responsible for shifting reef health and function directly via coral and symbiont infection and by altering biogeochemical cycling in host colonies and the adjacent reef system. The main goal of this project is to experimentally interrogate and then model the links among viral infections, declines in coral and reef health, and associated shifts in biogeochemical cycling in reef ecosystems. Lab and field experiments will be conducted at the Moorea Coral Reef LTER to characterize the spatiotemporal dynamics of viruses within two dominant reef-building coral species that differ in their susceptibility to abiotic stress. A novel viral infection and induction approach will be coupled with stable isotopic pulse-chase experiments to quantify and track carbon and nitrogen flux out of coral holobionts (host and microbial symbionts) and into dissolved and particulate pools. In these experiments, virus, bacteria, and symbiont abundance, diversity, and function will be measured simultaneously with the health and activity of the host. Pulse-chase techniques, as well as flux- and niche-based modeling, will result in a holistic understanding of how corals and associated viruses impact reef energy budgets and the ramifications of carbon and nitrogen flux for reef communities. Ultimately, this project will quantify and describe an integrated mechanism by which environmental stressors alter viral, microbial, and coral diversity and, consequently, ecosystem function.</p>
Moorea Virus Project
largerWorkCitation
project
eng; USA
oceans
-149.921
-149.762
-17.58
-17.4721
2017-09-12
2019-03-25
Moorea, French Polynesia, Pacific 17 S 150 W
0
BCO-DMO catalogue of parameters from Water column temperature measurements from 2017-2019 on coral reefs around the island of Mo’orea, French Polynesia
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/853460.rdf
Name: ISO_DateTime_UTC
Units: unitless
Description: <p>Sampling Date in ISO format (yyyy-mm-ddThh:mm:ssZ)</p>
http://lod.bco-dmo.org/id/dataset-parameter/853461.rdf
Name: Site
Units: unitless
Description: <p>Site identifier</p>
http://lod.bco-dmo.org/id/dataset-parameter/853462.rdf
Name: Reef_zone
Units: unitless
Description: <p>Location on the reef (Fore reef, Back reef, or Fringing)</p>
http://lod.bco-dmo.org/id/dataset-parameter/853463.rdf
Name: Latitude
Units: decimal degrees
Description: <p>Latitude of sampling location</p>
http://lod.bco-dmo.org/id/dataset-parameter/853464.rdf
Name: Longitude
Units: decimal degrees
Description: <p>Longitude of sampling location</p>
http://lod.bco-dmo.org/id/dataset-parameter/853465.rdf
Name: Temperature
Units: degrees Celsius
Description: <p>Mean temperature</p>
http://lod.bco-dmo.org/id/dataset-parameter/853466.rdf
Name: DateTime_local
Units: unitless
Description: <p>Local datetime of sampling</p>
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
8309024
https://darchive.mblwhoilibrary.org/bitstream/1912/27308/1/dataset-842938_water-column-temperature__v1.tsv
download
https://doi.org/10.26008/1912/bco-dmo.842938.1
download
onLine
dataset
<p>Water column temperatures were recorded around the island of Mo’orea, French Polynesia from September 2017 through March 2019.&nbsp; Onset HOBO&nbsp;temperature loggers were deployed by divers&nbsp;at nine sites within three reef zones, and replaced at six month intervals.&nbsp; The average (mean) temperature per hour was calculated and is reported, but no calibration was done for individual sensors.&nbsp;</p>
<p>Reef zones are designated by their location with respect to the reef:&nbsp;&nbsp;<br />
&nbsp; &nbsp;1)&nbsp; Fore = offshore or outside part of reef;&nbsp;<br />
&nbsp; &nbsp;2)&nbsp; Back&nbsp; = inside of the reef crest; or<br />
&nbsp; &nbsp;3)&nbsp; Fringing =&nbsp; adjacent to the shore.&nbsp;&nbsp;</p>
<p>&nbsp;</p>
Specified by the Principal Investigator(s)
<p>BCO-DMO processing description:<br />
- Separated latitude and longitude into individual columns<br />
-&nbsp;Corrected the missing digits in year field (for 25,161 entries)<br />
- Converted date and time fields to ISO date format (yyyy-mm-dd)<br />
- Converted date nad time fields to UTC time zone<br />
- Adjusted field/parameter names to comply with database requirements<br />
- Added a conventional header with dataset name, PI names, version date</p>
Specified by the Principal Investigator(s)
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
HOBO Pendant® Temperature/Light 8K Data Logger Part # UA-002-08
HOBO Pendant® Temperature/Light 8K Data Logger Part # UA-002-08
PI Supplied Instrument Name: HOBO Pendant® Temperature/Light 8K Data Logger Part # UA-002-08 PI Supplied Instrument Description:Onset HOBO temperature loggers were deployed by divers, but no calibration was done for individual sensors. Instrument Name: Onset HOBO Pendant Temperature/Light Data Logger Instrument Short Name:Onset HOBO Pendant Temp/Light Instrument Description: The Onset HOBO (model numbers UA-002-64 or UA-001-64) is an in-situ instrument for wet or underwater applications. It supports light intensity, soil temperature, temperature, and water temperature. A two-channel logger with 10-bit resolution can record up to approximately 28,000 combined temperature and light measurements with 64K bytes memory. It has a polypropylene housing case. Uses an optical USB to transmit data. A solar radiation shield is used for measurement in sunlight. Temperature measurement range: -20 deg C to 70 deg C (temperature). Light measurement range: 0 to 320,000 lux. Temperature accuracy: +/- 0.53 deg C from 0 deg C to 50 deg C. Light accuracy: Designed for measurement of relative light levels. Water depth rating: 30 m.