http://lod.bco-dmo.org/id/dataset/850190
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2021-04-23
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
Community composition (relative abundance) separated by native and cryptogenic, and introduced species of each community from coastal sites across a geographic gradient spanning the sub-arctic to the tropics from 2015-2017
2021-04-23
publication
2021-04-23
revision
Marine Biological Laboratory/Woods Hole Oceanographic Institution Library (MBLWHOI DLA)
2021-08-30
publication
https://doi.org/10.26008/1912/bco-dmo.850190.1
Amy L. Freestone
Temple University
principalInvestigator
Gregory E. Ruiz
Smithsonian Environmental Research Center
principalInvestigator
Mark E. Torchin
Smithsonian Tropical Research Institute
principalInvestigator
Laura J. Jurgens
Temple University
principalInvestigator
Carmen Schlöder
Smithsonian Tropical Research Institute
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Freestone, A., Torchin, M., Lopez, D. P., Bonfim, M., Jurgens, L., Repetto, M. F., Schloder, C., Ruiz, G. (2021) Community composition (relative abundance) separated by native and cryptogenic, and introduced species of each community from coastal sites across a geographic gradient spanning the sub-arctic to the tropics from 2015-2017. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2021-04-23 [if applicable, indicate subset used]. doi:10.26008/1912/bco-dmo.850190.1 [access date]
Dataset Description: <p>The main data table served from this Dataset Metadata Page includes data columns "Species" and "Abundance"&nbsp;&nbsp;(See "Parameters" section for more details about columns in the main data table).&nbsp; An alternate format of this dataset is available in the "Data Files" section which has an abundance column per species with a form of the species name as the column name.&nbsp;<br />
<br />
The alternate data format has two separate tables divided by whether it is for introduced species or native and cryptogenic species.&nbsp; That information is included in the main data table for this dataset in column&nbsp;"Species_status_type."</p> Methods and Sampling: <p>These data were used for the publication Lopez and Freestone (2020) and only include composition for taxa identified to genus or species and represent a subset of the data collected for OCE-1434528.<br />
<br />
<strong>Location:</strong>&nbsp; Ketchikan, AK, San Francisco, CA, La Paz, Mexico, and Panama City, Panama<br />
<br />
<strong>Methodology: </strong>Marine invertebrate communities grew on artificial settlement panels hung on floating docks one-meter below the water surface at local marinas in three coastal sites at each region (locations above).</p>
<p><strong>Sampling and analytical procedures: </strong>Marine invertebrates from each community were identified on a 50-point grid to generate a measure of percent cover by taxa. The National Exotic Marine and Estuarine Species Information System (NEMESIS) was used to assign status to confirmed species and complemented status information with published literature.</p>
<p><br />
&nbsp;</p>
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1434528 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1434528
onGoing
Amy L. Freestone
Temple University
215-204-1826
Department of Biology 1900 N 12th St.
Philadelphia
PA
19122
USA
amy.freestone@temple.edu
pointOfContact
Gregory E. Ruiz
Smithsonian Environmental Research Center
443-482-2227
P.O. Box 28 647 Contees Wharf Road
Edgewater
Maryland
21037-0028
USA
ruizg@si.edu
pointOfContact
Mark E. Torchin
Smithsonian Tropical Research Institute
Unit 9100 Box 0948
DPO AA
34002-9998
Panama
torchinm@si.edu
pointOfContact
Laura J. Jurgens
Temple University
707-875-1942
Marine Biology Department Texas A&M University at Galveston
Galveston
Texas
77553
USA
ljurgens@ucdavis.edu
pointOfContact
Carmen Schlöder
Smithsonian Tropical Research Institute
Smithsonian Tropical Research Institute
Panama City
Panama Province
Panama
schloederc@si.edu
pointOfContact
asNeeded
Dataset Version: 1
Unknown
Region
Site
Site_name
Deploy_month
Deploy_year
Latitude
Longitude
Treatment
Plate_ID
Species_status_type
Species
Abundance
theme
None, User defined
site description
site
month of year
year
latitude
longitude
treatment
sample description
taxon
percent coverage
featureType
BCO-DMO Standard Parameters
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
Community Effects of Competition and Predation across Latitude and Implications for Species Invasions
https://osprey.bco-dmo.org/project/516723
Community Effects of Competition and Predation across Latitude and Implications for Species Invasions
<p><em>Description from NSF award abstract:</em><br />
Global patterns of biodiversity demonstrate that most of the species on earth occur in the tropics, with strikingly fewer species occurring in higher-latitude regions. Biologists predict that this global pattern of species diversity is likely shaped by thee ecological interactions between species. Yet few detailed experimental data exist that demonstrate how species interactions influence natural communities from the tropics to the arctic. Therefore, a significant opportunity exists to transform our understanding of how these fundamental species interactions shape patterns of biodiversity across the globe. Furthermore, these species interactions have the strong potential to limit potentially harmful biological invasions by non-native species, which are often transported by human activities that can breach historical dispersal barriers, such as ocean basins and continents. Biological invasions can cause undesired ecological and economic effects and are considered one of the primary drivers of global change. Through extensive field research on marine ecosystems along the Pacific Coast of North and Central America, from the tropics to the subarctic, this project will study ecological factors that shape global patterns of diversity and limit biological invasions.</p>
<p>Biologists have long theorized that the latitudinal diversity gradient may be shaped by stronger species interactions, such as competition and predation, occurring in the tropics than at higher latitudes. Prior research suggests that predation pressure is indeed stronger at lower latitudes, but it is unclear how interactive effects of predation and competition structure communities to maintain these diversity patterns in ecological time. This project represents an international research program to expand ecological understanding of species interactions across latitude. The objectives are to determine the relative influences of two primary species interactions, competition and predation, on patterns of species diversity, community assembly and sensitivity to species invasion. Field research will employ a large-scale experimental approach that focuses on sessile marine invertebrate communities across 47 degrees of latitude (over 7000 km). Experiments will manipulate levels of predation and competition for one year and will be conducted in four regions, ranging from the subarctic to the tropics: Alaska, California, Mexico, and Panama. Communities of sessile marine invertebrates, composed of both native and non-native species, will be examined iteratively under different predation and competition regimes to evaluate community dynamics. The relative importance of a suite of factors, including environmental conditions and recruitment rates, to interaction outcomes will be evaluated.</p>
Competition and Predation across Latitude
largerWorkCitation
project
eng; USA
biota
oceans
-131.79698
-79.52183
8.91758
55.47257
2015-12-01
2017-06-01
Eastern Pacific in four coastal regions: Ketchikan, Alaska; San Francisco, California; La Paz, Mexico; and Panama City, Panama
0
BCO-DMO catalogue of parameters from Community composition (relative abundance) separated by native and cryptogenic, and introduced species of each community from coastal sites across a geographic gradient spanning the sub-arctic to the tropics from 2015-2017
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/851590.rdf
Name: Region
Units: unitless
Description: <p>Region where each taxon was collected (Alaska, Panama, Mexico, California)</p>
http://lod.bco-dmo.org/id/dataset-parameter/851591.rdf
Name: Site
Units: unitless
Description: <p>Unique site abbreviation (two letter code)</p>
http://lod.bco-dmo.org/id/dataset-parameter/851592.rdf
Name: Site_name
Units: unitless
Description: <p>Complete site name</p>
http://lod.bco-dmo.org/id/dataset-parameter/851593.rdf
Name: Deploy_month
Units: unitless
Description: <p>Month when experimental communities (panels) were deployed for a 3 month growth period. Numeric month.</p>
http://lod.bco-dmo.org/id/dataset-parameter/851594.rdf
Name: Deploy_year
Units: unitless
Description: <p>Year when experimental communities (panels) were deployed for a 3 month growth period. Year in format yyyy.</p>
http://lod.bco-dmo.org/id/dataset-parameter/851595.rdf
Name: Latitude
Units: decimal degrees
Description: <p>Latitude of site were communities were grown</p>
http://lod.bco-dmo.org/id/dataset-parameter/851596.rdf
Name: Longitude
Units: decimal degrees
Description: <p>Longitude of site were communities were grown</p>
http://lod.bco-dmo.org/id/dataset-parameter/851597.rdf
Name: Treatment
Units: unitless
Description: <p>Treatment description. full =full cage; open = no cage</p>
http://lod.bco-dmo.org/id/dataset-parameter/851598.rdf
Name: Plate_ID
Units: unitless
Description: <p>Unique panel (community) reference number</p>
http://lod.bco-dmo.org/id/dataset-parameter/851599.rdf
Name: Species_status_type
Units: unitless
Description: <p>Invasion status: nat = native or cryptogenic, int = introduced</p>
http://lod.bco-dmo.org/id/dataset-parameter/851600.rdf
Name: Species
Units: unitless
Description: <p>Lower taxonomic information (~genus/species, if available) based on best available information in the field</p>
http://lod.bco-dmo.org/id/dataset-parameter/851601.rdf
Name: Abundance
Units: percent cover (%)
Description: <p>Relative abundance of each taxon from a 14 x 14 cm panel and a 50 point grid</p>
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
481076
https://darchive.mblwhoilibrary.org/bitstream/1912/27496/1/dataset-850190_community-composition-separated-native-and-cryptogenic-and-introduced-species-each-community__v1.tsv
download
https://doi.org/10.26008/1912/bco-dmo.850190.1
download
onLine
dataset
<p>These data were used for the publication Lopez and Freestone (2020) and only include composition for taxa identified to genus or species and represent a subset of the data collected for OCE-1434528.<br />
<br />
<strong>Location:</strong>&nbsp; Ketchikan, AK, San Francisco, CA, La Paz, Mexico, and Panama City, Panama<br />
<br />
<strong>Methodology: </strong>Marine invertebrate communities grew on artificial settlement panels hung on floating docks one-meter below the water surface at local marinas in three coastal sites at each region (locations above).</p>
<p><strong>Sampling and analytical procedures: </strong>Marine invertebrates from each community were identified on a 50-point grid to generate a measure of percent cover by taxa. The National Exotic Marine and Estuarine Species Information System (NEMESIS) was used to assign status to confirmed species and complemented status information with published literature.</p>
<p><br />
&nbsp;</p>
Specified by the Principal Investigator(s)
<p>BCO-DMO Data Manager Processing Notes:<br />
* Imported files&nbsp; Rel_Abun_3mo_int_all_latlong.csv and&nbsp;Rel_Abun_3mo_nat_all_latlong.csv into the BCO-DMO data system.&nbsp;<br />
* Combined the two data tables adding a new column to capture the species type (int or nat).<br />
* unpivoted dataset. This&nbsp;transforms from all columns per species containing relative abundance into one column "Species" containing the taxonomic name and one column "Abundance" containing the relative abundance.<br />
* removed underscores in taxonomic names.&nbsp; Added the two data tables before combining and unpivoting to the&nbsp; "Data Files" section of this Dataset Metadata Page.<br />
* changed column names to match BCO-DMO naming conventions (only underscores and a-Z0-9)<br />
* Taxonomic names matched to accepted taxonomic names using the World Register of Marine Species taxa match tool on 2021-04-26.&nbsp; Names were not changed in this dataset. Misspelled and unaccepted synonyms are present in the data. A species list including the matches accepted names, aphiaIDs, and LSIDs attached to this dataset as a supplemental file.&nbsp; For more information see&nbsp;https://www.marinespecies.org/aphia.php?p=match</p>
Specified by the Principal Investigator(s)
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact