http://lod.bco-dmo.org/id/dataset/860506
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2021-09-13
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
Attributes of 36 tide pools measured in the light and dark at John Brown’s Beach, Sitka, Alaska, USA during 2018-2020
2021-09-13
publication
2021-09-13
revision
Marine Biological Laboratory/Woods Hole Oceanographic Institution Library (MBLWHOI DLA)
2021-09-20
publication
https://doi.org/10.26008/1912/bco-dmo.860506.1
Cascade Sorte
University of California-Irvine
principalInvestigator
Matthew Bracken
University of California-Irvine
principalInvestigator
Kristy J. Kroeker
University of California-Santa Cruz
principalInvestigator
Luke P. Miller
San Diego State University
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Sorte, C., Bracken, M., Kroeker, K., Miller, L. P. (2021) Attributes of 36 tide pools measured in the light and dark at John Brown’s Beach, Sitka, Alaska, USA during 2018-2020. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2021-09-13 [if applicable, indicate subset used]. doi:10.26008/1912/bco-dmo.860506.1 [access date]
Tide pool attributes measured in the light and dark at John Brown’s Beach, Sitka, Alaska, USA Dataset Description: Methods and Sampling: <p><strong>Sampling and Analytical Procedures:</strong><br />
This study was conducted on a set of tide pools on a rocky shoreline at John Brown's Beach (57.05 N, 135.37 W), near Sitka, Alaska, USA. We selected 36 tide pools for the light/dark incubation experiments during the first year of the experiment (2018), and sampled sets of those 36 pools in the following two years. The light/dark incubation trial method is separated into three phases: initial, dark, and recovery. We recorded the time that each measurement was taken throughout the experiment. Dates and times are recorded in local Alaska Standard / Alaska Daylight Time. Refer to the attached Supplemental File "<a href="https://datadocs.bco-dmo.org/docs/305/Sitka_CO2_and_Temp_Expt/data_docs/Tide_Pool_Characteristics.csv" target="_blank">Tide_Pool_Characteristics.csv</a>" for additional data characterizing each tide pool (e.g maximum depth, perimeter, volume, etc.)</p>
<p>We began each phase with a set of "ocean" measurements, which were collected from shallow (&lt;0.5m) water adjacent to the shoreline. We measured salinity, dissolved oxygen, temperature, pH, and light (just below the water's surface). During the remainder of the initial phase, we visited each tide pool and measured salinity, dissolved oxygen, temperature, pH, and light (just below the water's surface in the center of the pool). We then secured an opaque black plastic tarp over the tide pool for a duration of 30-45 minutes.</p>
<p>We revisited each pool after this dark incubation period and repeated the salinity, dissolved oxygen, temperature, and pH measurements prior to removing the tarp. We then removed the tarp to measure light. We allowed each pool to recover, un-covered, for another 30-45 minute period before collecting a third round of measurements of salinity, dissolved oxygen, temperature, pH, and light.</p>
<p><strong>Known Problems/Issues:</strong><br />
There are small gaps in the data, primarily from light measurements which were not collected in the field during some sampling periods. These gaps in the data include the absence of light measurements for the ocean in the initial and dark phases on 7/1/18, the absence of light measurements from the dark phase on 1/18/19, the absence of any ocean measurements for the initial and dark phases on 8/5/19, and the absence of a recovery phase light measurement in pools 29-32 and the ocean on 6/27/20.</p>
<p>There were also a pair of tide pools (22 and 23) in the original 36 which were connected, preventing accurate volume measurements from being taken.</p>
<p><strong>Related References:</strong><br />
The light/dark incubation method is also outlined in the methods of<em> Warming and Elevated CO2 Interact to Drive Rapid Shifts in Marine Community Production</em> (Sorte and Bracken, 2015) and <em>Assessment of a field incubation method estimating primary productivity in rockpool communities</em> (Noel et al., 2010).&nbsp;The multipoint calibration protocol used with the Hanna Instruments 9829 Multiparameter Meter is thoroughly described in SOP 6a in the <em>Guide to Best Practices for Ocean CO2 Measurements</em> (Dickson, Sabine &amp; Christian, 2007).</p>
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1756173 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1756173
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1756208 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1756208
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1756216 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1756216
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1904185 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1904185
completed
Cascade Sorte
University of California-Irvine
949-824-6971
Dept. Ecology & Evolutionary Biology 321 Steinhaus Hall
Irvine
CA
92697-2525
USA
csorte@uci.edu
pointOfContact
Matthew Bracken
University of California-Irvine
949-824-6976
Department of Ecology and Evolutionary Biology 321 Steinhaus Hall
Irvine
CA
92697-2525
USA
m.bracken@uci.edu
pointOfContact
Kristy J. Kroeker
University of California-Santa Cruz
831-566-8253
100 Shaffer Road
Santa Cruz
CA
95060
USA
kkroeker@ucsc.edu
pointOfContact
Luke P. Miller
San Diego State University
619-594-5391
Department of Biology 5500 Campanile Drive
San Diego
CA
92182-4614
USA
luke.miller@sdsu.edu
pointOfContact
asNeeded
Dataset Version: 1
Unknown
Pool_ID
Latitude
Longitude
Date
Initial_Light
Initial_Salinity
Initial_Dissolved_Oxygen
Initial_Temperature
Initial_pH
Initial_Time
Dark_Light
Dark_Salinity
Dark_Dissolved_Oxygen
Dark_Temperature
Dark_pH
Dark_Time
Recovery_Light
Recovery_Salinity
Recovery_Dissolved_Oxygen
Recovery_Temperature
Recovery_pH
Recovery_Time
MQ-210 Underwater Quantum Meter
ProDSS Multiparameter Water Quality Meter
Hanna Instruments 9829 Multiparameter Meter
theme
None, User defined
site
latitude
longitude
date_local
No BCO-DMO term
salinity
dissolved Oxygen
water temperature at measurement depth
pH
time_local
featureType
BCO-DMO Standard Parameters
Light Meter
Water Quality Multiprobe
Water Quality Multiprobe
instrument
BCO-DMO Standard Instruments
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
Collaborative Research: Effects of multiple aspects of climate change on marine biodiversity and ecosystem functioning
https://osprey.bco-dmo.org/project/752682
Collaborative Research: Effects of multiple aspects of climate change on marine biodiversity and ecosystem functioning
<p><em>NSF Award Abstract:</em><br />
This project addresses fundamental gaps in our knowledge of how changing environmental conditions will impact the earth's species and ecosystems. One of the main challenges is predicting impacts of multiple environmental stressors changing at the same time within highly dynamic ecosystems. Climate simulations in coastal marine habitats will, therefore, yield critical information about likely future changes in biodiversity and ecosystem health. This project is a partnership between institutions with a strong focus on serving underrepresented communities of students, and the investigators are committed to participating in K-12 and undergraduate mentorship programs through their respective institutions. Furthermore, the research will be based in Sitka, Alaska, where investigators will collaborate with the Sitka Sound Science Center to incorporate research into the Scientist in the Schools program and a summer day camp for elementary age children.</p>
<p>This work aims to uncover the trajectory of climate change impacts and interactive responses to multiple climatic stressors on coastal marine species, communities, and ecosystem functioning. To uncover these links, the investigators will (1) quantify seasonal and diel dynamics under ambient conditions in a benthic marine community, (2) conduct factorial manipulations of two climatic stressors - increased carbon dioxide concentrations and temperatures - and measure impacts on physiology, diversity, and productivity, and (3) conduct a second field experiment to evaluate whether productivity responses are due to changes in physiology or biodiversity. Climatic changes have the potential to influence ecosystem functioning by altering physiology, abundance, and community structure (i.e., biodiversity), and this research specifically aims to partition these different pathways, leading to more effective predictions of impacts on benthic marine ecosystems.</p>
<p>This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria.</p>
Sitka CO2 and Temp Expt
largerWorkCitation
project
eng; USA
oceans
-135.37306
-135.37253
57.05492
57.05632
2018-07-01
2020-09-19
Sitka Sound, Alaska, USA (57.1N 135.4 W)
0
BCO-DMO catalogue of parameters from Attributes of 36 tide pools measured in the light and dark at John Brown’s Beach, Sitka, Alaska, USA during 2018-2020
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/860520.rdf
Name: Pool_ID
Units: unitless
Description: <p>The number assigned to each tide pool.</p>
http://lod.bco-dmo.org/id/dataset-parameter/860521.rdf
Name: Latitude
Units: degrees North
Description: <p>The latitude of each tide pool.</p>
http://lod.bco-dmo.org/id/dataset-parameter/860522.rdf
Name: Longitude
Units: degrees East
Description: <p>The longitude of each tide pool.</p>
http://lod.bco-dmo.org/id/dataset-parameter/860523.rdf
Name: Date
Units: unitless
Description: <p>The date when the data were collected (local Alaska Standard / Alaska Daylight Time). Format: YYYY-MM-DD</p>
http://lod.bco-dmo.org/id/dataset-parameter/860524.rdf
Name: Initial_Light
Units: micromoles per square meter per hour (umol/m2*hr)
Description: <p>Light measured with a MQ-210 Underwater Quantum Meter (Apogee, Logan, Utah, USA), measured in the center of the tide pool ~1cm below water surface.</p>
http://lod.bco-dmo.org/id/dataset-parameter/860525.rdf
Name: Initial_Salinity
Units: PSU
Description: <p>Salinity (in Practical Salinity Units) measured with a ProDSS Multiparameter Water Quality Meter (YSI, Yellow Springs, Ohio, USA).</p>
http://lod.bco-dmo.org/id/dataset-parameter/860526.rdf
Name: Initial_Dissolved_Oxygen
Units: milligrams per liter (mg/L)
Description: <p>Dissolved oxygen measured with a ProDSS Multiparameter Water Quality Meter (YSI, Yellow Springs, Ohio, USA).</p>
http://lod.bco-dmo.org/id/dataset-parameter/860527.rdf
Name: Initial_Temperature
Units: degrees Celsius
Description: <p>Temperature measured with a ProDSS Multiparameter Water Quality Meter (YSI, Yellow Springs, Ohio, USA).</p>
http://lod.bco-dmo.org/id/dataset-parameter/860528.rdf
Name: Initial_pH
Units: millivolts (mV)
Description: <p>pH measured with a Hanna Instruments 9829 Multiparameter Meter (Hanna Instruments, Smithfield, Rhode Island, USA).</p>
http://lod.bco-dmo.org/id/dataset-parameter/860529.rdf
Name: Initial_Time
Units: unitless
Description: <p>The time when the data were collected (local Alaska Standard / Alaska Daylight Time). Format: hh:mm</p>
http://lod.bco-dmo.org/id/dataset-parameter/860530.rdf
Name: Dark_Light
Units: micromoles per square meter per hour (umol/m2*hr)
Description: <p>Light measured with a MQ-210 Underwater Quantum Meter (Apogee, Logan, Utah, USA), measured in the center of the tide pool ~1cm below water surface.</p>
http://lod.bco-dmo.org/id/dataset-parameter/860531.rdf
Name: Dark_Salinity
Units: PSU
Description: <p>Salinity (in Practical Salinity Units) measured with a ProDSS Multiparameter Water Quality Meter (YSI, Yellow Springs, Ohio, USA).</p>
http://lod.bco-dmo.org/id/dataset-parameter/860532.rdf
Name: Dark_Dissolved_Oxygen
Units: milligrams per liter (mg/L)
Description: <p>Dissolved oxygen measured with a ProDSS Multiparameter Water Quality Meter (YSI, Yellow Springs, Ohio, USA).</p>
http://lod.bco-dmo.org/id/dataset-parameter/860533.rdf
Name: Dark_Temperature
Units: degrees Celsius
Description: <p>Temperature measured with a ProDSS Multiparameter Water Quality Meter (YSI, Yellow Springs, Ohio, USA).</p>
http://lod.bco-dmo.org/id/dataset-parameter/860534.rdf
Name: Dark_pH
Units: millivolts (mV)
Description: <p>pH measured with a Hanna Instruments 9829 Multiparameter Meter (Hanna Instruments, Smithfield, Rhode Island, USA).</p>
http://lod.bco-dmo.org/id/dataset-parameter/860535.rdf
Name: Dark_Time
Units: unitless
Description: <p>The time when the data were collected (local Alaska Standard / Alaska Daylight Time). Format: hh:mm</p>
http://lod.bco-dmo.org/id/dataset-parameter/860536.rdf
Name: Recovery_Light
Units: micromoles per square meter per hour (umol/m2*hr)
Description: <p>Light measured with a MQ-210 Underwater Quantum Meter (Apogee, Logan, Utah, USA), measured in the center of the tide pool ~1cm below water surface.</p>
http://lod.bco-dmo.org/id/dataset-parameter/860537.rdf
Name: Recovery_Salinity
Units: PSU
Description: <p>Salinity (in Practical Salinity Units) measured with a ProDSS Multiparameter Water Quality Meter (YSI, Yellow Springs, Ohio, USA).</p>
http://lod.bco-dmo.org/id/dataset-parameter/860538.rdf
Name: Recovery_Dissolved_Oxygen
Units: milligrams per liter (mg/L)
Description: <p>Dissolved oxygen measured with a ProDSS Multiparameter Water Quality Meter (YSI, Yellow Springs, Ohio, USA).</p>
http://lod.bco-dmo.org/id/dataset-parameter/860539.rdf
Name: Recovery_Temperature
Units: degrees Celsius
Description: <p>Temperature measured with a ProDSS Multiparameter Water Quality Meter (YSI, Yellow Springs, Ohio, USA).</p>
http://lod.bco-dmo.org/id/dataset-parameter/860540.rdf
Name: Recovery_pH
Units: millivolts (mV)
Description: <p>pH measured with a Hanna Instruments 9829 Multiparameter Meter (Hanna Instruments, Smithfield, Rhode Island, USA).</p>
http://lod.bco-dmo.org/id/dataset-parameter/860541.rdf
Name: Recovery_Time
Units: unitless
Description: <p>The time when the data were collected (local Alaska Standard / Alaska Daylight Time). Format: hh:mm</p>
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
42034
https://darchive.mblwhoilibrary.org/bitstream/1912/27569/1/dataset-860506_light-dark-tide-pool-productivity__v1.tsv
download
https://doi.org/10.26008/1912/bco-dmo.860506.1
download
onLine
dataset
<p><strong>Sampling and Analytical Procedures:</strong><br />
This study was conducted on a set of tide pools on a rocky shoreline at John Brown's Beach (57.05 N, 135.37 W), near Sitka, Alaska, USA. We selected 36 tide pools for the light/dark incubation experiments during the first year of the experiment (2018), and sampled sets of those 36 pools in the following two years. The light/dark incubation trial method is separated into three phases: initial, dark, and recovery. We recorded the time that each measurement was taken throughout the experiment. Dates and times are recorded in local Alaska Standard / Alaska Daylight Time. Refer to the attached Supplemental File "<a href="https://datadocs.bco-dmo.org/docs/305/Sitka_CO2_and_Temp_Expt/data_docs/Tide_Pool_Characteristics.csv" target="_blank">Tide_Pool_Characteristics.csv</a>" for additional data characterizing each tide pool (e.g maximum depth, perimeter, volume, etc.)</p>
<p>We began each phase with a set of "ocean" measurements, which were collected from shallow (&lt;0.5m) water adjacent to the shoreline. We measured salinity, dissolved oxygen, temperature, pH, and light (just below the water's surface). During the remainder of the initial phase, we visited each tide pool and measured salinity, dissolved oxygen, temperature, pH, and light (just below the water's surface in the center of the pool). We then secured an opaque black plastic tarp over the tide pool for a duration of 30-45 minutes.</p>
<p>We revisited each pool after this dark incubation period and repeated the salinity, dissolved oxygen, temperature, and pH measurements prior to removing the tarp. We then removed the tarp to measure light. We allowed each pool to recover, un-covered, for another 30-45 minute period before collecting a third round of measurements of salinity, dissolved oxygen, temperature, pH, and light.</p>
<p><strong>Known Problems/Issues:</strong><br />
There are small gaps in the data, primarily from light measurements which were not collected in the field during some sampling periods. These gaps in the data include the absence of light measurements for the ocean in the initial and dark phases on 7/1/18, the absence of light measurements from the dark phase on 1/18/19, the absence of any ocean measurements for the initial and dark phases on 8/5/19, and the absence of a recovery phase light measurement in pools 29-32 and the ocean on 6/27/20.</p>
<p>There were also a pair of tide pools (22 and 23) in the original 36 which were connected, preventing accurate volume measurements from being taken.</p>
<p><strong>Related References:</strong><br />
The light/dark incubation method is also outlined in the methods of<em> Warming and Elevated CO2 Interact to Drive Rapid Shifts in Marine Community Production</em> (Sorte and Bracken, 2015) and <em>Assessment of a field incubation method estimating primary productivity in rockpool communities</em> (Noel et al., 2010).&nbsp;The multipoint calibration protocol used with the Hanna Instruments 9829 Multiparameter Meter is thoroughly described in SOP 6a in the <em>Guide to Best Practices for Ocean CO2 Measurements</em> (Dickson, Sabine &amp; Christian, 2007).</p>
Specified by the Principal Investigator(s)
<p><strong>Data Processing:&nbsp;</strong><br />
Data were collected on data sheets in the field and entered into an Excel spreadsheet, where the data were later double-checked against the original data sheets to ensure transfer accuracy.</p>
<p><strong>BCO-DMO Processing:</strong><br />
- joined the Latitude and Longitude columns to the Productivity data from the "Pool_Characteristics" sheet in the original Exel file, matching on Pool_ID field;<br />
- converted date to YYYY-MM-DD format;<br />
- exported the "Pool_Characteristics" sheet as a .csv file.</p>
Specified by the Principal Investigator(s)
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
MQ-210 Underwater Quantum Meter
MQ-210 Underwater Quantum Meter
PI Supplied Instrument Name: MQ-210 Underwater Quantum Meter PI Supplied Instrument Description:Light measurements were taken with a MQ-210 Underwater Quantum Meter (Apogee, Logan, Utah, USA). Instrument Name: Light Meter Instrument Short Name:Light Meter Instrument Description: Light meters are instruments that measure light intensity. Common units of measure for light intensity are umol/m2/s or uE/m2/s (micromoles per meter squared per second or microEinsteins per meter squared per second). (example: LI-COR 250A)
ProDSS Multiparameter Water Quality Meter
ProDSS Multiparameter Water Quality Meter
PI Supplied Instrument Name: ProDSS Multiparameter Water Quality Meter PI Supplied Instrument Description:Salinity, dissolved Oxygen, and temperature were measured with a ProDSS Multiparameter Water Quality Meter (YSI, Yellow Springs, Ohio, USA). Instrument Name: Water Quality Multiprobe Instrument Short Name:Water Quality Multiprobe Instrument Description: An instrument which measures multiple water quality parameters based on the sensor configuration.
Hanna Instruments 9829 Multiparameter Meter
Hanna Instruments 9829 Multiparameter Meter
PI Supplied Instrument Name: Hanna Instruments 9829 Multiparameter Meter PI Supplied Instrument Description:pH was measured with a Hanna Instruments 9829 Multiparameter Meter (Hanna Instruments, Smithfield, Rhode Island, USA), which was calibrated with a multipoint calibration to a Tris standard (Marine Physical Laboratory, Scripps Institution of Oceanography, La Jolla, California, USA). Instrument Name: Water Quality Multiprobe Instrument Short Name:Water Quality Multiprobe Instrument Description: An instrument which measures multiple water quality parameters based on the sensor configuration.