http://lod.bco-dmo.org/id/dataset/862405
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2021-10-04
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
Fish and invertebrate transect survey dataset from the West coast of Leyte, the Philippines in the municipalities of Albuera (10.91667, 124.69667) and Bay Bay City (11.07611, 124.87525), 2014-2017
2022-11-22
publication
2022-11-22
revision
Marine Biological Laboratory/Woods Hole Oceanographic Institution Library (MBLWHOI DLA)
2022-11-22
publication
https://doi.org/10.26008/1912/bco-dmo.862405.1
Malin Pinsky
Rutgers University
principalInvestigator
Michelle Stuart
Rutgers University
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Pinsky, M., Stuart, M. (2022) Fish and invertebrate transect survey dataset from the West coast of Leyte, the Philippines in the municipalities of Albuera (10.91667, 124.69667) and Bay Bay City (11.07611, 124.87525), 2014-2017. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2022-11-22 [if applicable, indicate subset used]. doi:10.26008/1912/bco-dmo.862405.1 [access date]
Dataset Description: <p>See Related Datasets and Supplemental Files sections for other data collected as part of the same transect and quadrat surveys.</p> Methods and Sampling: <p>Field seasons (SCUBA) in Leyte, Philippines to study coral reef fish resilience.<br />
Location: West coast of Leyte, Philippines in the municipalities of Albuera (10.91667, 124.69667) and Bay Bay City&nbsp; (10.676940, 124.799170)</p>
<p>&nbsp;Fish and invertebrate surveyor procedure:</p>
<div>- records dive and transect attributes:</div>
<div>- dive number</div>
<div>- transect number</div>
<div>- site name</div>
<div>- date</div>
<div>- time</div>
<div>- observer initials</div>
<div>- visibility (meters)</div>
<div>- depth at start of transect (feet)</div>
<div>- depth at end of transect (feet)</div>
<div>- transect length (meters)</div>
<div>- transect width (meters)</div>
<div>- expected transect duration (minutes)</div>
<div>- swim the length of a 25m by 5m transect in 20 minutes and record all fish (&gt;2 cm, non-cryptic) within transect bounds</div>
<div>- swim back along the length of a 25m by 5m transect in 10 minutes and record all invertebrates within transect bounds</div>
<div>- record any additional notes<br />
<br />
Instruments:<br />
SCUBA gear (mask, tank, regulator, wetsuit, fins, dive computer)<br />
Waterproof paper<br />
Pencil</div>
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1430218 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1430218
completed
Malin Pinsky
Rutgers University
848-932-8242
14 College Farm Rd.
New Brunswick
NJ
08901
USA
malin.pinsky@rutgers.edu
pointOfContact
Michelle Stuart
Rutgers University
(848) 932-5515
ENR 168 14 College Farm Rd
New Brunswick
NJ
08901
USA
michelle.stuart@rutgers.edu
pointOfContact
asNeeded
Dataset Version: 1
Unknown
DiveNum
TransectNum
Site
Date
Time
Observer
Vis_m
Depth_start_ft
Depth_end_ft
Length_m
Width_m
Duration_min
Species
Num_0_5
Num_5_10
Num_10_15
Num_15_20
Num_20_25
Num_25_30
Num_30_35
Num_35_40
Num_40_45
Num_45_50
Num_50_55
Num_55_plus
Notes
Family
ISO_DateTime_UTC
theme
None, User defined
dive_id
transect
site
date_local
time_local
person name
visibility
depth
length
width
time_elapsed
taxon_code
abundance
comments
taxon
ISO_DateTime_UTC
featureType
BCO-DMO Standard Parameters
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
RAPID: Mega-typhoon impacts on the metapopulation resilience of coral reef fishes
https://osprey.bco-dmo.org/project/554706
RAPID: Mega-typhoon impacts on the metapopulation resilience of coral reef fishes
<p><em>Description from NSF award abstract:</em><br />
When Typhoon Haiyan hit the Philippines it had sustained winds of 305 to 315 kph and was the strongest storm ever to make landfall. Storms are one of the most important disturbances to coral reef ecosystems. Previous research has primarily emphasized that habitat recovery is important for the recovery of reef fish communities after disturbance. We understand little, however, about the role of larval dispersal in mediating species responses to disturbance. Reef fish function as metapopulations connected by larval dispersal among reefs, and larval connectivity is therefore a critical process for their dynamics. A field site directly in Typhoon Haiyan's path provides an ideal opportunity to address the role of larval dispersal during recovery. Over the course of four field seasons (2008 to 2013), nearly two thousand clownfish were surveyed along 20km of coastline. Clownfish possess the same basic life history as most reef fish (sedentary adults and pelagic larvae), but are sufficiently rare and visible that genetic parentage methods can be used to follow larval dispersal. This study site is therefore a unique location in which to understand the metapopulation impacts of a massive storm. This project will focus on three hypotheses: 1) Habitat destruction determines the short-term impacts of storms disturbance, 2) Metapopulation processes shape recolonization after disturbance, and 3) Disturbance allows rare competitors to increase in abundance. The project will address these questions with a combination of fixed and random transects to assess reef habitat and reef fish abundance and diversity, as well as detailed, spatially explicit surveys of anemones and clownfish. Genetic mark-recapture and parentage methods with yellowtail clownfish will pinpoint the origin of new recruits that recolonize the reef post-typhoon.</p>
Reef Fish Resilience
largerWorkCitation
project
eng; USA
oceans
124.711
124.787
10.6335
10.8743
2014-06-08
2017-05-08
West coast of Leyte Island, Visayas, Philippines
0
BCO-DMO catalogue of parameters from Fish and invertebrate transect survey dataset from the West coast of Leyte, the Philippines in the municipalities of Albuera (10.91667, 124.69667) and Bay Bay City (11.07611, 124.87525), 2014-2017
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/883383.rdf
Name: DiveNum
Units: unitless
Description: <p>Dive Number</p>
http://lod.bco-dmo.org/id/dataset-parameter/883384.rdf
Name: TransectNum
Units: unitless
Description: <p>Transect Number</p>
http://lod.bco-dmo.org/id/dataset-parameter/883385.rdf
Name: Site
Units: unitless
Description: <p>Site name</p>
http://lod.bco-dmo.org/id/dataset-parameter/883386.rdf
Name: Date
Units: unitless
Description: <p>Date (local)</p>
http://lod.bco-dmo.org/id/dataset-parameter/883387.rdf
Name: Time
Units: unitless
Description: <p>Time (local)</p>
http://lod.bco-dmo.org/id/dataset-parameter/883388.rdf
Name: Observer
Units: unitless
Description: <p>observer initials</p>
http://lod.bco-dmo.org/id/dataset-parameter/883389.rdf
Name: Vis_m
Units: meters (m)
Description: <p>Visibility</p>
http://lod.bco-dmo.org/id/dataset-parameter/883390.rdf
Name: Depth_start_ft
Units: feet (ft)
Description: <p>depth at start of transect</p>
http://lod.bco-dmo.org/id/dataset-parameter/883391.rdf
Name: Depth_end_ft
Units: feet (ft)
Description: <p>depth at end of transect</p>
http://lod.bco-dmo.org/id/dataset-parameter/883392.rdf
Name: Length_m
Units: meters (m)
Description: <p>transect length</p>
http://lod.bco-dmo.org/id/dataset-parameter/883393.rdf
Name: Width_m
Units: meters (m)
Description: <p>transect width</p>
http://lod.bco-dmo.org/id/dataset-parameter/883394.rdf
Name: Duration_min
Units: minutes
Description: <p>duration of transect</p>
http://lod.bco-dmo.org/id/dataset-parameter/883395.rdf
Name: Species
Units: unitless
Description: <p>Species code (see supplemental species code table)</p>
http://lod.bco-dmo.org/id/dataset-parameter/883396.rdf
Name: Num_0_5
Units: per individual
Description: <p>number of individuals for 0 to 5 cm in length</p>
http://lod.bco-dmo.org/id/dataset-parameter/883397.rdf
Name: Num_5_10
Units: per individual
Description: <p>number of individuals for 5 to 10 cm in length</p>
http://lod.bco-dmo.org/id/dataset-parameter/883398.rdf
Name: Num_10_15
Units: per individual
Description: <p>number of individuals for 10 to 15 cm in length</p>
http://lod.bco-dmo.org/id/dataset-parameter/883399.rdf
Name: Num_15_20
Units: per individual
Description: <p>number of individuals for 15 to 20 cm in length</p>
http://lod.bco-dmo.org/id/dataset-parameter/883400.rdf
Name: Num_20_25
Units: per individual
Description: <p>number of individuals for 20 to 25 cm in length</p>
http://lod.bco-dmo.org/id/dataset-parameter/883401.rdf
Name: Num_25_30
Units: per individual
Description: <p>number of individuals for 25 to 30 cm in length</p>
http://lod.bco-dmo.org/id/dataset-parameter/883402.rdf
Name: Num_30_35
Units: per individual
Description: <p>number of individuals for 30 to 35 cm in length</p>
http://lod.bco-dmo.org/id/dataset-parameter/883403.rdf
Name: Num_35_40
Units: per individual
Description: <p>number of individuals for 35 to 40 cm in length</p>
http://lod.bco-dmo.org/id/dataset-parameter/883404.rdf
Name: Num_40_45
Units: per individual
Description: <p>number of individuals for 40 to 45 cm in length</p>
http://lod.bco-dmo.org/id/dataset-parameter/883405.rdf
Name: Num_45_50
Units: per individual
Description: <p>number of individuals for 45 to 50 cm in length</p>
http://lod.bco-dmo.org/id/dataset-parameter/883406.rdf
Name: Num_50_55
Units: per individual
Description: <p>number of individuals for 50 to 55 cm in length</p>
http://lod.bco-dmo.org/id/dataset-parameter/883407.rdf
Name: Num_55_plus
Units: per individual
Description: <p>number of individuals above 55 cm in length</p>
http://lod.bco-dmo.org/id/dataset-parameter/883408.rdf
Name: Notes
Units: unitless
Description: <p>transect notes</p>
http://lod.bco-dmo.org/id/dataset-parameter/883409.rdf
Name: Family
Units: unitless
Description: <p>taxonomic family of fish or invertebrate</p>
http://lod.bco-dmo.org/id/dataset-parameter/883410.rdf
Name: ISO_DateTime_UTC
Units: unitless
Description: <p>Timestamp with time zone (UTC) in ISO 8601 format</p>
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
173436
https://darchive.mblwhoilibrary.org/bitstream/1912/29526/1/dataset-862405_fish-and-invertebrate-transects__v1.tsv
download
https://doi.org/10.26008/1912/bco-dmo.862405.1
download
onLine
dataset
<p>Field seasons (SCUBA) in Leyte, Philippines to study coral reef fish resilience.<br />
Location: West coast of Leyte, Philippines in the municipalities of Albuera (10.91667, 124.69667) and Bay Bay City&nbsp; (10.676940, 124.799170)</p>
<p>&nbsp;Fish and invertebrate surveyor procedure:</p>
<div>- records dive and transect attributes:</div>
<div>- dive number</div>
<div>- transect number</div>
<div>- site name</div>
<div>- date</div>
<div>- time</div>
<div>- observer initials</div>
<div>- visibility (meters)</div>
<div>- depth at start of transect (feet)</div>
<div>- depth at end of transect (feet)</div>
<div>- transect length (meters)</div>
<div>- transect width (meters)</div>
<div>- expected transect duration (minutes)</div>
<div>- swim the length of a 25m by 5m transect in 20 minutes and record all fish (&gt;2 cm, non-cryptic) within transect bounds</div>
<div>- swim back along the length of a 25m by 5m transect in 10 minutes and record all invertebrates within transect bounds</div>
<div>- record any additional notes<br />
<br />
Instruments:<br />
SCUBA gear (mask, tank, regulator, wetsuit, fins, dive computer)<br />
Waterproof paper<br />
Pencil</div>
Specified by the Principal Investigator(s)
<p>BCO-DMO Data Manager Processing notes:<br />
* Imported data tables each sheet named "FishInvert" within files submitted to BCO-DMO as Transect_and_quadrat_data/GPSSurveys.*.xlsx<br />
* supplemental transect locations table from Transect_locations/Transect_locations.*.xlsx concatenated together and attached to this dataset and Benthic Cover dataset as a supplemental file.&nbsp; See the file description for details about one location lat/lon that was updated based on a comment in the file.<br />
* Taxon and ID codes for Fish, anemone, and invertebrates&nbsp;added as a supplemental file from codes in "Codes" sheet of&nbsp;GPSSurveys.*.xlsx.&nbsp; Tail and "Clown" codes were not used here, but can be found as part of&nbsp;the related "Clownfish photo" dataset and log.<br />
* replaced semicolons in time values to colons to match the rest of the time format.<br />
* Column Image_nums listed file image numbers delimited with either a space, comma, or comma and space.&nbsp; Changed to semicolon delimiter for consistency.<br />
* Date format changed to ISO 8601 format YYYY-MM-DD<br />
* Column ISO_DateTime_UTC added to data table from local dates and times.<br />
* After consultation with the data submitter, null values in count colunms were changed to 0 values since that is the correct value to use. Columns updated (Num_0_5&nbsp; Num_5_10&nbsp; Num_10_15&nbsp; Num_15_20&nbsp; Num_20_25&nbsp; Num_25_30&nbsp; Num_30_35&nbsp; Num_35_40&nbsp; Num_40_45&nbsp; Num_45_50&nbsp; Num_50_55&nbsp; Num_55_plus).</p>
Specified by the Principal Investigator(s)
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact