http://lod.bco-dmo.org/id/dataset/871719
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2022-03-18
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
Pilot study with three unique genotypes of Acropora cervicornis coral to determine survival probability after exposure to temperature treatments at Mote Marine Laboratory in September and October 2019
2022-03-18
publication
2022-03-18
revision
BCO-DMO Linked Data URI
2022-03-18
creation
http://lod.bco-dmo.org/id/dataset/871719
Erinn M. Muller
Mote Marine Laboratory
principalInvestigator
Chelsea Petrik
Mote Marine Laboratory
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Muller, E. M., Petrik, C. (2022) Pilot study with three unique genotypes of Acropora cervicornis coral to determine survival probability after exposure to temperature treatments at Mote Marine Laboratory in September and October 2019. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2022-03-18 [if applicable, indicate subset used]. http://lod.bco-dmo.org/id/dataset/871719 [access date]
Acer short term pilot study with 3 genotypes Dataset Description: Methods and Sampling: <p>A pilot study was completed to determine the survival probability of 3 unique genotypes of <em>Acropora&nbsp;cervicornis</em> at three different temperature profiles (29, 32, or 33 degrees Celsius). Corals (n=72) were held at their respective temperature treatments until the corals experienced signs of bleaching activity or mortality.</p>
<p>After &gt;2 weeks (on Day 16 or Day 22), half of the corals were transferred to new tanks with different treatment conditions while the others remained in the original tanks and maintained their&nbsp;initial conditions.&nbsp;</p>
<p>Data was collected pertaining to the time (days) till mortality which would later be incorporated into a survival analysis (see dataset XXXXXX). Each fragment was assessed for its relative color index (ranging from D1 as pale color to D5 as full color) &nbsp;at 0900 daily to document the rate of observable change in health.&nbsp; The coral health chart/ color index card was provided by CoralWatch.</p>
<p>A full&nbsp;factorial experiment was completed subsequently--see Related Datasets section below for details.</p>
<p>&nbsp;</p>
<p>&nbsp;</p>
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1452538 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1452538
onGoing
Erinn M. Muller
Mote Marine Laboratory
941-388-4441 x 310
1600 Ken Thompson Parkway
Sarasota
FL
34241
USA
emuller@mote.org
pointOfContact
Chelsea Petrik
Mote Marine Laboratory
cpetrik@mote.org
pointOfContact
asNeeded
Dataset Version: 1
Unknown
Latitude
Longitude
Experiment
Genotype
Replicate
Tank_num
Starting_Temp
Temp_Treatment
pCO2_Treatment
Start_Health_Index
Start_Date_Exposure
Event_Date
Event
New_Tank_num
Temp_New_Tank
Notes
End_Date_Exposure
End_Exposure_Reason
End_Health_Index
Outcome
Days_until_mortality
treatment tanks
YSI Professional Plus (Pro Plus) Multi-parameter handheld
theme
None, User defined
latitude
longitude
experiment id
sample type
replicate
tank
water temperature at measurement depth
treatment
sample description
date begin
date
event
comments
date end
brief description
duration
featureType
BCO-DMO Standard Parameters
Aquarium
YSI Professional Plus Multi-Parameter Probe
instrument
BCO-DMO Standard Instruments
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
CAREER: Applying phenotypic variability to identify resilient Acropora cervicornis genotypes in the Florida Keys
https://osprey.bco-dmo.org/project/642850
CAREER: Applying phenotypic variability to identify resilient Acropora cervicornis genotypes in the Florida Keys
<p><em>NSF Award Abstract:</em><br />
Caribbean staghorn coral was one of the most common corals within reefs of the Florida Keys several decades ago. Over the last 40 years disease, bleaching, overfishing and habitat degradation caused a 95% reduction of the population. Staghorn coral is now listed as threatened under the U.S. Endangered Species Act of 1973. Within the past few years, millions of dollars have been invested for the purpose of restoring the population of staghorn coral within Florida and the U.S. Virgin Islands. Significant effort has been placed on maintaining and propagating corals of known genotypes within coral nurseries for the purpose of outplanting. However, little is known about the individual genotypes that are currently being outplanted from nurseries onto coral reefs. Are the genotypes being used for outplanting resilient enough to survive the three major stressors affecting the population in the Florida Keys: disease, high water temperatures, and ocean acidification? The research within the present study will be the first step in answering this critically important question. The funded project will additionally develop a research-based afterschool program with K-12 students in the Florida Keys and U.S. Virgin Islands that emphasizes an inquiry-based curriculum, STEM research activities, and peer-to-peer mentoring. The information from the present study will help scientists predict the likelihood of species persistence within the lower Florida Keys under future climate-change and ocean-acidification scenarios. Results of this research will also help guide restoration efforts throughout Florida and the Caribbean, and lead to more informative, science-based restoration activities.</p>
<p><em>Acropora cervicornis</em> dominated shallow-water reefs within the Florida Keys for at least the last half a million years, but the population has recently declined due to multiple stressors. Understanding the current population level of resilience to three major threats - disease outbreaks, high water temperatures, and ocean acidification conditions - is critical for the preservation of this threatened species. Results from the present study will answer the primary research question: will representative genotypes from the lower Florida Keys provide enough phenotypic variation for this threatened species to survive in the future? The present proposal will couple controlled laboratory challenge experiments with field data and modeling applications, and collaborate with local educators to fulfill five objectives: 1) identify <em>A. cervicornis</em> genotypes resistant to disease, 2) identify <em>A. cervicornis</em> genotypes resilient to high water temperature and ocean acidification conditions, 3) quantify how high water temperature and ocean acidification conditions impact disease dynamics on <em>A. cervicornis</em>; 4) determine tradeoffs in life-history traits because of resilience factors; and 5) apply a trait-based model, which will predict genotypic structure of a population under different environmental scenarios.</p>
Resilient Acerv
largerWorkCitation
project
eng; USA
biota
climatologyMeteorologyAtmosphere
oceans
-81.4541
-81.4541
24.6616
24.6616
2019-09-25
2019-10-28
Florida Keys, Summerland Key, FL 24.563595°, -81.278572°
0
BCO-DMO catalogue of parameters from Pilot study with three unique genotypes of Acropora cervicornis coral to determine survival probability after exposure to temperature treatments at Mote Marine Laboratory in September and October 2019
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/873404.rdf
Name: Latitude
Units: decimal degrees
Description: <p>Latitude</p>
http://lod.bco-dmo.org/id/dataset-parameter/873405.rdf
Name: Longitude
Units: decimal degrees
Description: <p>Longitude</p>
http://lod.bco-dmo.org/id/dataset-parameter/873406.rdf
Name: Experiment
Units: unitless
Description: <p>Experiment identification</p>
http://lod.bco-dmo.org/id/dataset-parameter/873407.rdf
Name: Genotype
Units: unitless
Description: <p>Number of coral genotype</p>
http://lod.bco-dmo.org/id/dataset-parameter/873408.rdf
Name: Replicate
Units: unitless
Description: <p>Number of replicate</p>
http://lod.bco-dmo.org/id/dataset-parameter/873409.rdf
Name: Tank_num
Units: unitless
Description: <p>Tank number</p>
http://lod.bco-dmo.org/id/dataset-parameter/873410.rdf
Name: Starting_Temp
Units: degrees Celsius
Description: <p>Starting water temperature</p>
http://lod.bco-dmo.org/id/dataset-parameter/873411.rdf
Name: Temp_Treatment
Units: unitless
Description: <p>Aquarium temperature conditions (ambient or high temperature)</p>
http://lod.bco-dmo.org/id/dataset-parameter/873412.rdf
Name: pCO2_Treatment
Units: unitless
Description: <p>Aquarium pCO2 conditions (ambient or high pCO2)</p>
http://lod.bco-dmo.org/id/dataset-parameter/873413.rdf
Name: Start_Health_Index
Units: unitless
Description: <p>Starting coral color quantification based on color index</p>
http://lod.bco-dmo.org/id/dataset-parameter/873414.rdf
Name: Start_Date_Exposure
Units: unitless
Description: <p>Date when coral was placed in tank</p>
http://lod.bco-dmo.org/id/dataset-parameter/873415.rdf
Name: Event_Date
Units: unitless
Description: <p>Date when coral was moved to a new tank</p>
http://lod.bco-dmo.org/id/dataset-parameter/873416.rdf
Name: Event
Units: unitless
Description: <p>Description of event</p>
http://lod.bco-dmo.org/id/dataset-parameter/873417.rdf
Name: New_Tank_num
Units: unitless
Description: <p>Tank number of new tank where coral was transferred</p>
http://lod.bco-dmo.org/id/dataset-parameter/873418.rdf
Name: Temp_New_Tank
Units: degrees Celsius
Description: <p>Temperature of the new tank where coral was transferred</p>
http://lod.bco-dmo.org/id/dataset-parameter/873419.rdf
Name: Notes
Units: unitless
Description: <p>Comments about tank changes</p>
http://lod.bco-dmo.org/id/dataset-parameter/873420.rdf
Name: End_Date_Exposure
Units: unitless
Description: <p>Date when exposure to treatment ended</p>
http://lod.bco-dmo.org/id/dataset-parameter/873421.rdf
Name: End_Exposure_Reason
Units: unitless
Description: <p>Reason why exposure to treatment ended</p>
http://lod.bco-dmo.org/id/dataset-parameter/873422.rdf
Name: End_Health_Index
Units: unitless
Description: <p>Ending coral color quantification based on color index</p>
http://lod.bco-dmo.org/id/dataset-parameter/873423.rdf
Name: Outcome
Units: unitless
Description: <p>Status of the coral replicate at the end of the experiment (i.e. Dead, Pale, Sampled, Alive)</p>
http://lod.bco-dmo.org/id/dataset-parameter/873424.rdf
Name: Days_until_mortality
Units: days
Description: <p>Time in days from start date of experiment until date of mortality</p>
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
https://osprey.bco-dmo.org/dataset/871719/data/download
download
onLine
dataset
<p>A pilot study was completed to determine the survival probability of 3 unique genotypes of <em>Acropora&nbsp;cervicornis</em> at three different temperature profiles (29, 32, or 33 degrees Celsius). Corals (n=72) were held at their respective temperature treatments until the corals experienced signs of bleaching activity or mortality.</p>
<p>After &gt;2 weeks (on Day 16 or Day 22), half of the corals were transferred to new tanks with different treatment conditions while the others remained in the original tanks and maintained their&nbsp;initial conditions.&nbsp;</p>
<p>Data was collected pertaining to the time (days) till mortality which would later be incorporated into a survival analysis (see dataset XXXXXX). Each fragment was assessed for its relative color index (ranging from D1 as pale color to D5 as full color) &nbsp;at 0900 daily to document the rate of observable change in health.&nbsp; The coral health chart/ color index card was provided by CoralWatch.</p>
<p>A full&nbsp;factorial experiment was completed subsequently--see Related Datasets section below for details.</p>
<p>&nbsp;</p>
<p>&nbsp;</p>
Specified by the Principal Investigator(s)
<p>(??? Much processing was done for the full factorial study, but what was done for this study ???)</p>
<p>&nbsp;</p>
Specified by the Principal Investigator(s)
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
treatment tanks
treatment tanks
PI Supplied Instrument Name: treatment tanks PI Supplied Instrument Description:Coral fragments were placed into treatment tanks (raceways) Instrument Name: Aquarium Instrument Short Name:Aquarium Instrument Description: Aquarium - a vivarium consisting of at least one transparent side in which water-dwelling plants or animals are kept
YSI Professional Plus (Pro Plus) Multi-parameter handheld
YSI Professional Plus (Pro Plus) Multi-parameter handheld
PI Supplied Instrument Name: YSI Professional Plus (Pro Plus) Multi-parameter handheld PI Supplied Instrument Description:Treatment tank water quality was monitored using a YSI Professional Plus (Pro Plus) Multi-parameter handheld with a quarto containing a Pro Series Galvanic Dissolved Oxygen Sensor, a Pro Series pH Sensor, and a Pro Series temperature and conductivity sensor Instrument Name: YSI Professional Plus Multi-Parameter Probe Instrument Short Name:YSI ProPlus Instrument Description: The YSI Professional Plus handheld multiparameter meter provides for the measurement of a variety of combinations for dissolved oxygen, conductivity, specific conductance, salinity, resistivity, total dissolved solids (TDS), pH, ORP, pH/ORP combination, ammonium (ammonia), nitrate, chloride and temperature. More information from the manufacturer.